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Starting up the functional ribosome-omics (ribosomomics): an approach from the translation arrest

Research Project

Project/Area Number 16K14746
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Plant molecular biology/Plant physiology
Research InstitutionHokkaido University

Principal Investigator

NAITO Satoshi  北海道大学, 農学研究院, 教授 (20164105)

Research Collaborator TAKAMATSU Seidai  
MIURA Yuka  
Project Period (FY) 2016-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2017: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2016: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Keywordsリボソーム / 多様性 / ストレス応答
Outline of Final Research Achievements

In Arabidopsis, ribosomal protein genes are consisted of two to four paralogs, and, in most of the cases, the difference in the encoded amino acid sequences is one to several percent from each other. The possibility that these differences are plants’ strategy to cope with the changing environmental conditions was explored by analyzing ribosome stalling under specific condition as well as analysis of published transcriptome data. The latter analysis showed that expression levels of paralogous genes change depending on the stress conditions. Whether the paralogous subunit proteins are functioning in the ribosome particles is yet to be studied.

Report

(3 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report

URL: 

Published: 2016-04-21   Modified: 2019-03-29  

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