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Development of novel desiccation and salinity-indusible expression systems

Research Project

Project/Area Number 16K15073
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Insect science
Research InstitutionNational Agriculture and Food Research Organization

Principal Investigator

Kikawada Takahiro  国立研究開発法人農業・食品産業技術総合研究機構, 生物機能利用研究部門, 上級研究員 (60414900)

Co-Investigator(Renkei-kenkyūsha) Gusev Oleg  国立研究開発法人理化学研究所, 予防医療・診断技術開発プログラム・研究プログラム, マネージャー (30711999)
Research Collaborator Cornette Richard  
Miyata Yugo  
Sogame Yoichiro  
Tokumoto Shoko  
Project Period (FY) 2016-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2017: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2016: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywords遺伝子発現 / プロモーター / 乾燥耐性 / 昆虫 / 生体機能利用 / 遺伝子発現制御
Outline of Final Research Achievements

Our final goal of this project is to develop a novel heterologous gene expression system based on dry- and salinity-inducible promoters in the anhydrobiotic insect, Polypedilum vanderplanki. In 2016, the promoter region for PvGapdh gene was identified as a novel constitutive promoter, which allowed effectively expressing heterologous proteins, such as GFP, in Pv11 cells, a cultured cell line derived from the anhydrobiotic insect. In 2017, we found a highly conserved motif (TCTAGAA) in the promoter regions for several desiccation-inducible genes in the insect, which motif was corresponded with Drosophila’s heat shock element (HSE). RNAi experiments demonstrated that PvHSF1, a homolog for the HSE-binding protein in the anhydrobiotic insect, could be involved in induction of the extreme desiccation tolerance in Pv11 cells.

Report

(3 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • Research Products

    (39 results)

All 2018 2017 2016 Other

All Int'l Joint Research (2 results) Journal Article (10 results) (of which Int'l Joint Research: 8 results,  Peer Reviewed: 10 results,  Open Access: 5 results,  Acknowledgement Compliant: 3 results) Presentation (27 results) (of which Int'l Joint Research: 15 results,  Invited: 9 results)

  • [Int'l Joint Research] カザン大学(ロシア連邦)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] カザン大学(ロシア連邦)

    • Related Report
      2016 Research-status Report
  • [Journal Article] Cooption of heat shock regulatory system for anhydrobiosis in the sleeping chironomidPolypedilum vanderplanki2018

    • Author(s)
      Mazin Pavel V.、Shagimardanova Elena、Kozlova Olga、Cherkasov Alexander、Sutormin Roman、Stepanova Vita V.、Stupnikov Alexey、Logacheva Maria、Penin Aleksey、Sogame Yoichiro、Cornette Richard、Tokumoto Shoko、Miyata Yugo、Kikawada Takahiro、Gelfand Mikhail S.、Gusev Oleg
    • Journal Title

      Proceedings of the National Academy of Sciences of the United States of America

      Volume: 115 Issue: 10

    • DOI

      10.1073/pnas.1719493115

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Towards water-free biobanks: long-term dry preservation at room temperature of desiccation-sensitive enzyme luciferase in air-dried insect cells2017

    • Author(s)
      2.Kikuta S, Watanabe SJ, Sato R, Gusev O, Nesmelov A, Sogame Y, Cornette R, Kikawada T
    • Journal Title

      Scientific Reports

      Volume: 7 Issue: 1 Pages: 6540-6540

    • DOI

      10.1038/s41598-017-06945-y

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Establishment of gene transfer and gene silencing methods in a desiccation‐tolerant cell line, Pv112017

    • Author(s)
      Yoichiro Sogame, Jun Okada, Shingo Kikuta, Yugo Miyata, Richard Cornette, Oleg Gusev, Takahiro Kikawada
    • Journal Title

      Extremophiles

      Volume: 21 Issue: 1 Pages: 65-72

    • DOI

      10.1007/s00792-016-0880-4

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Genetic background of enhanced radioresistance in an anhydrobiotic insect: transcriptional response to ionizing radiations and desiccation2017

    • Author(s)
      Alina Ryabova, Kyosuke Mukae, Alexander Cherkasov, Richard Cornette, Elena Shagimardanova, Tetsuya Sakashita, Takashi Okuda, Takahiro Kikawada, Oleg Gusev
    • Journal Title

      Extremophiles

      Volume: 21 Issue: 1 Pages: 109-120

    • DOI

      10.1007/s00792-016-0888-9

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Current findings on the molecular mechanisms underlying anhydrobiosis in Polypedilum vanderplanki2017

    • Author(s)
      Yoichiro Sogame, Takahiro Kikawada
    • Journal Title

      Current Opinion in Insect Science

      Volume: 19 Pages: 16-21

    • DOI

      10.1016/j.cois.2016.10.008

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] In Vitro Recombinant Expression of Novel Protective Protein Highly Accumulated in Dry State in an Anhydrobiotic Insect2017

    • Author(s)
      Hagiwara-Komoda Yuka ,Oleg Gusev ,Elena Shagimardanova ,Takahiro Kikawada
    • Journal Title

      BioNanoScience

      Volume: - Issue: 2 Pages: 263-264

    • DOI

      10.1007/s12668-016-0356-0

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Regulation of Gene Expression for L-Isoaspartyl O-Methyltransferases by Cis-Elements Associated with “Heat-Shock Polytene Chromosome Puffing Formation” in the Anhydrobiotic Midge2017

    • Author(s)
      Ruslan Deviatiiarov ,Elena Shagimardanova ,Takahiro Kikawada
    • Journal Title

      BioNanoScience

      Volume: 7 Issue: 1 Pages: 212-215

    • DOI

      10.1007/s12668-016-0312-z

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Molecular Mechanisms Underpinning Anhydrobiosis in the Sleeping Chironomid: What Do We Know So Far?2016

    • Author(s)
      十亀陽一郎, 黄川田隆洋
    • Journal Title

      KAGAKU TO SEIBUTSU

      Volume: 54 Issue: 4 Pages: 248-253

    • DOI

      10.1271/kagakutoseibutsu.54.248

    • NAID

      130005464556

    • ISSN
      0453-073X, 1883-6852
    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] New Antioxidant Genes from an Anhydrobiotic Insect: Unique Structural Features in Functional Motifs of Thioredoxins2016

    • Author(s)
      A. A. Nesmelov ,R. M. Devatiyarov ,T. A. Voronina ,S. A. Kondratyeva ,A. V. Cherkasov ,R. Cornette,T. Kikawada,E. I. Shagimardanova
    • Journal Title

      BioNanoScience

      Volume: 6 Issue: 4 Pages: 568-570

    • DOI

      10.1007/s12668-016-0278-x

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] LEA4 Protein Is Likely to Be Involved in Direct Protection of DNA Against External Damage2016

    • Author(s)
      Alina Ryabova ,Alexander Cherkasov ,Ryohei Yamaguchi ,Richard Cornette,Takahiro Kikawada,Oleg Gusev
    • Journal Title

      BioNanoScience

      Volume: 6 Issue: 4 Pages: 554-557

    • DOI

      10.1007/s12668-016-0275-0

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Presentation] HSFの選択的スプライシングによる乾燥耐性制御機構の解明2017

    • Author(s)
      徳本翔子、宮田佑吾、Oleg Gusev、黄川田隆洋
    • Organizer
      第61回日本応用動物昆虫学会大会
    • Place of Presentation
      東京農工大学小金井キャンパス(東京都・小金井市)
    • Year and Date
      2017-03-27
    • Related Report
      2016 Research-status Report
  • [Presentation] Impact of anhydrobiotic midge research in the area of cells preservation2017

    • Author(s)
      Takahiro Kikawada
    • Organizer
      Life of Genome 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Life in no water: the extreme desiccation tolerance, anhydrobiosis in the African midge and its cultured cell line2017

    • Author(s)
      Takahiro Kikawada
    • Organizer
      Summit on Organ Banking through Converging Technologies
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 水の無い環境で死なないための生命戦略:ネムリユスリカの極限乾燥耐性2017

    • Author(s)
      黄川田 隆洋
    • Organizer
      日本動物学会第88回富山大会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Hsfの選択的スプライシングによるネムリユスリカ特異的な乾燥耐性制御機構2017

    • Author(s)
      徳本翔子、宮田佑吾、Ruslan Deviatiiarov、Oleg Gusev、黄川田 隆洋
    • Organizer
      The 4th WBC (Wakate Bio-resource center Conference)
    • Related Report
      2017 Annual Research Report
  • [Presentation] ネムリユスリカにおける新規プロモーターの同定とその応用2017

    • Author(s)
      徳本翔子、宮田佑吾、十亀陽一郎、黄川田 隆洋
    • Organizer
      2017年度 極限環境生物学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Toward water-free biobanks: long-term dry-preservation of desiccation sensitive enzyme in the anhydrobiotic insect cells2017

    • Author(s)
      黄川田 隆洋、菊田真吾、渡辺俊介、佐藤令一、Oleg Gusev、Alexander Nesmelov、十亀陽一郎、コルネット リシャー
    • Organizer
      2017年度 生命科学系学会合同年次大会 第40回日本分子生物学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Hsfの選択的スプライシングによるネムリユスリカ特異的な乾燥耐性制御機構の解明2017

    • Author(s)
      徳本翔子、宮田佑吾、Ruslan Deviatiiarov、Oleg Gusev、黄川田 隆洋
    • Organizer
      2017年度 生命科学系学会合同年次大会 第40回日本分子生物学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 極限乾燥耐性研究のモデル生物としてのネムリユスリカ2016

    • Author(s)
      黄川田 隆洋、宮田 佑吾、十亀 陽一郎、Richard Cornette、Oleg Gusev
    • Organizer
      第39回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県・横浜市)
    • Year and Date
      2016-11-30
    • Related Report
      2016 Research-status Report
    • Invited
  • [Presentation] Single-nucleotide resolution map of promoters expression in anhydrobiotic midge provides new insights on mechanisms of tissue-specific desiccation resistance2016

    • Author(s)
      Ruslan Deviatiiarov、Arina Kozakova、Arina Danilina、Richard Cornette、Elena Shagimardanova、Michiel J.L. de Hoon、黄川田 隆洋、Oleg Gusev
    • Organizer
      第39回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県・横浜市)
    • Year and Date
      2016-11-30
    • Related Report
      2016 Research-status Report
  • [Presentation] CRISPR/Cas9システムを用いたネムリユスリカ培養細胞のゲノム編集2016

    • Author(s)
      宮田 佑吾、十亀 陽一郎、徳本 翔子、櫻井 実、黄川田 隆洋
    • Organizer
      第39回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県・横浜市)
    • Year and Date
      2016-11-30
    • Related Report
      2016 Research-status Report
  • [Presentation] Molecular mechanisms underlying anhydrobiosis, the ametabolic suspended animation, in the sleeping chironomid Polypedilum vanderplanki2016

    • Author(s)
      黄川田 隆洋
    • Organizer
      The Joint meeting of the 22nd International Congress of Zoology (ICZ) & the 87th meeting of the Zoological Society of Japan (ZSJ)
    • Place of Presentation
      沖縄科学技術大学院大学(沖縄県・国頭郡恩納村)
    • Year and Date
      2016-11-14
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] ネムリユスリカの耐性機構を応用した常温乾燥保存技術開発の可能性2016

    • Author(s)
      黄川田 隆洋
    • Organizer
      Cryopreservation Conference 2016
    • Place of Presentation
      基礎生物学研究所(愛知県・岡崎市)
    • Year and Date
      2016-11-10
    • Related Report
      2016 Research-status Report
    • Invited
  • [Presentation] Current knowledge of anhydrobiosis in the sleeping chironomid Polypedilum vanderplanki2016

    • Author(s)
      黄川田 隆洋、Richard Cornette、Oleg Gusev
    • Organizer
      ICE 2016 XXV International Congress of Entomology
    • Place of Presentation
      オーランド(アメリカ合衆国)
    • Year and Date
      2016-09-25
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Identification of a strong promoter in cultured cells of Polypedilum vanderplanki as a tool to reveal molecular background underlying anhydrobiosis2016

    • Author(s)
      十亀 陽一郎、岡田 淳、菊田 真吾、Ruslan Deviatiiarov、Richard Cornette、Oleg Gusev 、黄川田 隆洋
    • Organizer
      ICE 2016 XXV International Congress of Entomology
    • Place of Presentation
      オーランド(アメリカ合衆国)
    • Year and Date
      2016-09-25
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Molecular mechanisms underlying the extreme desiccation tolerance in the anhydrobiotic insect Polypedilum vanderplanki2016

    • Author(s)
      黄川田 隆洋
    • Organizer
      Extremophiles 2016, 11th International Congress of Extremophiles
    • Place of Presentation
      京都大学(京都府・京都市)
    • Year and Date
      2016-09-12
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] なぜ乾いても死なない??ネムリユスリカの乾燥耐性機構の獲得と進化?2016

    • Author(s)
      黄川田 隆洋
    • Organizer
      日本遺伝学会第88回大会
    • Place of Presentation
      日本大学三島キャンパス(静岡県・三島市)
    • Year and Date
      2016-09-07
    • Related Report
      2016 Research-status Report
    • Invited
  • [Presentation] The first edition of mutagenesis by CRISPR/Ca in the extreme desiccation tolerant cell.2016

    • Author(s)
      黄川田 隆洋、宮田 佑吾 、十亀 陽一郎、古澤軌、菊田 真吾、Richard Cornette、Oleg Gusev
    • Organizer
      The tenth international conference on bioinformatics of genome regulation and structure/systems biology
    • Place of Presentation
      ノボシビルスク(ロシア)
    • Year and Date
      2016-08-29
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Regulation of thioredoxin genes expression in desiccation-tolerant insect Polypedilum vanderplanki2016

    • Author(s)
      Alexander Nesmelov 、Elena Shagimardanova 、Maria Logacheva、Richard Cornette、黄川田 隆洋、Oleg Gusev
    • Organizer
      The tenth international conference on bioinformatics of genome regulation and structure/systems biology
    • Place of Presentation
      ノボシビルスク(ロシア)
    • Year and Date
      2016-08-29
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Anhydrobiosis related promoters in Pv11 cell line2016

    • Author(s)
      Ruslan Deviatiiarov、黄川田 隆洋、Richard Cornette、Oleg Gusev
    • Organizer
      The tenth international conference on bioinformatics of genome regulation and structure/systems biology
    • Place of Presentation
      ノボシビルスク(ロシア)
    • Year and Date
      2016-08-29
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Anhydro-preservation of exogenously-expressed desiccation-sensitive enzyme luciferase using insect cells2016

    • Author(s)
      菊田 真吾、渡辺 俊介、Oleg Gusev 、十亀 陽一郎、Richard Cornette、黄川田 隆洋
    • Organizer
      The tenth international conference on bioinformatics of genome regulation and structure/systems biology
    • Place of Presentation
      ノボシビルスク(ロシア)
    • Year and Date
      2016-08-29
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Analysis of a powerful constitutive promoter in cultured cells of Polypedilum vanderplanki2016

    • Author(s)
      十亀 陽一郎、宮田 佑吾 、Ruslan Deviatiiarov、菊田 真吾、Richard Cornette、Oleg Gusev 、古澤軌、黄川田 隆洋
    • Organizer
      The tenth international conference on bioinformatics of genome regulation and structure/systems biology
    • Place of Presentation
      ノボシビルスク(ロシア)
    • Year and Date
      2016-08-29
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Comparative genomics and transcriptomics of Chironomidae midges under extreme conditions2016

    • Author(s)
      Olga Kozlova、Alexandr Cherkasov、Ruslan Deviatiiarov、Maria Logacheva、Richard Cornette、黄川田 隆洋、Andrey Przhiboro、Oleg Gusev
    • Organizer
      The tenth international conference on bioinformatics of genome regulation and structure/systems biology
    • Place of Presentation
      ノボシビルスク(ロシア)
    • Year and Date
      2016-08-29
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Alina Ryabova、Alexsandr Cherkasov、Kyosuke Mukae、黄川田 隆洋、奥田隆、坂下 哲也、Oleg Gusev2016

    • Author(s)
      Alina Ryabova、Alexsandr Cherkasov、Kyosuke Mukae、黄川田 隆洋、奥田隆、坂下 哲也、Oleg Gusev
    • Organizer
      The tenth international conference on bioinformatics of genome regulation and structure/systems biology
    • Place of Presentation
      ノボシビルスク(ロシア)
    • Year and Date
      2016-08-29
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Elucidation of molecular signal of transcription response to desiccation stress in chironomid P. vanderplanki.2016

    • Author(s)
      Elena Shagimardanova、Ruslan Deviatiiarov、黄川田 隆洋、Oleg Gusev
    • Organizer
      The tenth international conference on bioinformatics of genome regulation and structure/systems biology
    • Place of Presentation
      ノボシビルスク(ロシア)
    • Year and Date
      2016-08-29
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Functional analyses on the mechanism of induction of anhydrobiosis in the midge Polypedilum vanderplanki2016

    • Author(s)
      Cornette Richard、岩田健一、菊田慎吾、十亀陽一郎、奥田隆、黄川田隆洋
    • Organizer
      The tenth international conference on bioinformatics of genome regulation and structure/systems biology
    • Place of Presentation
      ノボシビルスク(ロシア)
    • Year and Date
      2016-08-29
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] 極限環境耐性機構のオミクス解析:どこまでネムリユスリカの秘密は解き明かされたのか2016

    • Author(s)
      黄川田 隆洋
    • Organizer
      第61回低温生物工学会セミナー及び年会
    • Place of Presentation
      東京電機大学鳩山キャンパス(埼玉県・比企郡鳩山町)
    • Year and Date
      2016-06-25
    • Related Report
      2016 Research-status Report
    • Invited

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Published: 2016-04-21   Modified: 2022-07-19  

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