• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Use of FALI with cDNA display single-domain antibodies for efficient functional screening of therapeutic targets

Research Project

Project/Area Number 16K15206
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field General pharmacology
Research InstitutionJuntendo University

Principal Investigator

SAKURAI Takashi  順天堂大学, 医学部, 教授 (70225845)

Co-Investigator(Kenkyū-buntansha) 根本 直人  埼玉大学, 理工学研究科, 教授 (60509727)
Research Collaborator HASHIMOTO yoshie  
Project Period (FY) 2016-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2017: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2016: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywords組換え抗体 / 神経科学 / プロテオーム / cDNAディスプレイ
Outline of Final Research Achievements

Fluorophore-assisted light inactivation (FALI) enables real-time inactivation of specific proteins targeted in-situ by fluorophore-labeled probes. In combination with a cell-based assay, FALI is a valuable technique for use as a functional proteomic screen to search for druggable targets. One of the major obstacles of this method is the construction of probe libraries containing high-affinity binders that cover cell surface membrane proteins as potential targets. To overcome this barrier, we used synthetic single domain antibodies derived from camel variable domains of heavy chain antibodies (VHH) and alternative non-antibody scaffolds. The efficiency of cell-free cDNA display expression of the molecules was measured. Through the use of thermostable scaffolds, we improved the expression of non-antibody affinity reagents linked to their genotypes. We attempted high-affinity clone selection for membrane proteins from a newly synthesized non-antibody probe library.

Academic Significance and Societal Importance of the Research Achievements

神経-グリア相互作用などの細胞間相互作用は、その局所における時間依存的なシグナルにより制御されていることから、それに関わるタンパク質の解析・探索には、時間分解能の高い方法が必要とされる。FALIと細胞機能アッセイの組合せはこれに適した方法であるが、その効率化には問題があった。本研究は組換え抗体様分子とcDNA displayによる課題解決を目的としたものであり、実現すればこれまでにない特徴を持った細胞機能スクリーニングとして創薬に結びつけることが可能である。

Report

(4 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • 2016 Research-status Report
  • Research Products

    (15 results)

All 2019 2018 2017 2016 Other

All Journal Article (5 results) (of which Peer Reviewed: 3 results,  Open Access: 2 results,  Acknowledgement Compliant: 1 results) Presentation (6 results) (of which Int'l Joint Research: 1 results,  Invited: 2 results) Book (1 results) Remarks (3 results)

  • [Journal Article] A novel immuno-PCR method using cDNA display2019

    • Author(s)
      Anzai Hiroki、Terai Takuya、Jayathilake Chathuni、Suzuki Takeru、Nemoto Naoto
    • Journal Title

      Analytical Biochemistry

      Volume: - Pages: 1-6

    • DOI

      10.1016/j.ab.2019.04.017

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Anti-survivin single-domain antibodies derived from an artificial library including three synthetic random regions by in?vitro selection using cDNA display2018

    • Author(s)
      Suzuki Takeru、Mochizuki Yuki、Kimura Shinnosuke、Akazawa-Ogawa Yoko、Hagihara Yoshihisa、Nemoto Naoto
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: 503 Issue: 3 Pages: 2054-2060

    • DOI

      10.1016/j.bbrc.2018.07.158

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Enhanced mRNA-protein fusion efficiency of a single-domain antibody by selection of mRNA display with additional random sequences in the terminal translated regions2017

    • Author(s)
      Kazuki Takahashi, Masato Sunohara, Takuya Terai, Shigefumi Kumachi and Naoto Nemoto
    • Journal Title

      Biophysics and Physicobiology

      Volume: 14 Issue: 0 Pages: 23-28

    • DOI

      10.2142/biophysico.14.0_23

    • NAID

      130005396150

    • ISSN
      2189-4779
    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] cDNAディスプレイによる機能性ペプチドアプタマーの創生2016

    • Author(s)
      根本直人
    • Journal Title

      日本生物工学会誌

      Volume: 94 Pages: 481-484

    • Related Report
      2016 Research-status Report
  • [Journal Article] 試験管内進化を加速するcDNA display システム2016

    • Author(s)
      熊地重文、根本直人
    • Journal Title

      酵素工学ニュース

      Volume: 76 Pages: 21-25

    • Related Report
      2016 Research-status Report
  • [Presentation] 制限酵素非依存ライブラリ構築法を利用した非天然次世代抗体VHHライブラリ2018

    • Author(s)
      山本恭秀、熊地重文、松川優太、望月祐樹、根本直人
    • Organizer
      日本化学会 第98回春季年会
    • Related Report
      2017 Research-status Report
  • [Presentation] cDNAディスプレイ法を用いた単ドメイン抗体のFALIへの応用2017

    • Author(s)
      橋本祥江、望月佑樹、熊地重文、樫山拓、上窪裕二、藤本健造、根本直人、櫻井隆
    • Organizer
      第90回日本薬理学会年会
    • Place of Presentation
      長崎ブリックホール(長崎県長崎市)
    • Year and Date
      2017-03-17
    • Related Report
      2016 Research-status Report
  • [Presentation] In vitro selection of single-domain antibodies from an artificial DNA library by cDNA display2017

    • Author(s)
      Takeru Suzuki, Hiroki Anzai, Yuki Mochizuki, Shinnosuke Kimura, Naoto Nemoto
    • Organizer
      19th IUPAB congress and 11th EBSA congress
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] ハイスループット淘汰技術を用いた配列空間探査による新機能分子(ネオバイオ分子)の創製2016

    • Author(s)
      根本直人
    • Organizer
      第39回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Year and Date
      2016-12-02
    • Related Report
      2016 Research-status Report
  • [Presentation] cDNA display method and its applications for the in vitro selection of functional peptides2016

    • Author(s)
      根本直人
    • Organizer
      第68回日本生物工学会大会 国際シンポジウム
    • Place of Presentation
      富山国際会議場(富山県富山市)
    • Year and Date
      2016-09-29
    • Related Report
      2016 Research-status Report
    • Invited
  • [Presentation] 完全人工デザインVHH抗体の進化工学的創製2016

    • Author(s)
      鈴木武尊、根本直人
    • Organizer
      第16回日本蛋白質科学会年会 ワークショップ
    • Place of Presentation
      福岡国際会議場(福岡県福岡市)
    • Year and Date
      2016-06-09
    • Related Report
      2016 Research-status Report
    • Invited
  • [Book] ペプチド医薬品のスクリーニング・安定化・製剤化技術2017

    • Author(s)
      寺井琢也、熊地重文、根本直人
    • Total Pages
      10
    • Publisher
      技術情報協会
    • ISBN
      9784861046872
    • Related Report
      2017 Research-status Report
  • [Remarks] 順天堂大学大学院細胞・分子薬理学ホームページ

    • URL

      http://pharmacology.sakura.ne.jp/jp/research/fali_res/fali_res.html

    • Related Report
      2018 Annual Research Report 2017 Research-status Report 2016 Research-status Report
  • [Remarks] 埼玉大学大学院理工学研究科物理機能系専攻生体高分子研究グループ根本研究室ホームページ

    • URL

      http://park.saitama-u.ac.jp/~nemoto/

    • Related Report
      2018 Annual Research Report 2017 Research-status Report
  • [Remarks] 埼玉大学大学院理工学研究科物質科学部門生体高分子研究グループ根本研究室ホームページ

    • URL

      http://park.saitama-u.ac.jp/~nemoto/

    • Related Report
      2016 Research-status Report

URL: 

Published: 2016-04-21   Modified: 2020-03-30  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi