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Development of whole labyrinth imaging by bone tissue trasnparency

Research Project

Project/Area Number 16K15717
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Otorhinolaryngology
Research InstitutionThe University of Tokyo

Principal Investigator

Yamasoba Tatsuya  東京大学, 医学部附属病院, 教授 (60251302)

Co-Investigator(Renkei-kenkyūsha) OKABE Shigeo  東京大学, 医学部, 教授 (60204012)
MATSUMOTO Yu  東京大学, 医学部附属病院, 特任講師 (80548553)
FUJIMOTO Chisato  東京大学, 医学部附属病院, 助教 (60581882)
KASHIO Akinori  東京大学, 医学部附属病院, 助教 (20451809)
Research Collaborator URATA Shinji  東京大学, 大学院医学系研究科, 大学院生
Project Period (FY) 2016-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥3,380,000 (Direct Cost: ¥2,600,000、Indirect Cost: ¥780,000)
Fiscal Year 2017: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2016: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywords神経科学 / 脳・神経 / 解剖学 / 蝸牛 / 内耳 / 細胞・組織
Outline of Final Research Achievements

We successfully modified a sorbitol-based optical clearing method, ScaleS,for use in high resolution imaging of the entire cochlea, an essential hearing organ within the temporal bone. We reported a tissue clearing-based analytical pipeline for the construction of a single-cellular resolution imaging of the entire cochlea.This method can be completed within two days for the fluorescent protein detection or within three days for immunohistochemistry of endogenous proteins. We generated entire cochlear maps at different postnatal ages with or without noise-induced cochlear damage by recording the cell distribution along the entire longitudinal axis. We next reported machine learning-based pattern recognition automated high-fidelity detection and analysis of total hair cell positions along the longitudinal axis of the organ of Corti.Our method of cellular mapping is highly effective in system-level phenotyping of the organ of Corti under both physiological and pathological conditions.

Report

(3 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • Research Products

    (5 results)

All 2017 2016

All Presentation (4 results) (of which Int'l Joint Research: 1 results) Patent(Industrial Property Rights) (1 results)

  • [Presentation] 透明化技術を用いた全蝸牛イメージング2017

    • Author(s)
      浦田真次、山岨達也
    • Organizer
      第27回日本耳科学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] The effects of noise-induced hearing loss on the cochlea revealed by the new optical clearing method.2017

    • Author(s)
      浦田真次、岡部繁男、山岨達也
    • Organizer
      第122回解剖学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Three-dimensional imaging of the whole intact cochlear by optical clearing methods.2017

    • Author(s)
      浦田真次、岡部繁男、山岨達也
    • Organizer
      21st World Congress of the International Federation of Oto-Rhino-Laryngological Societies
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Rapid clearing and labeling of mouse cochlea by modified Sca/eS enable exhaustive analysis of hair cell.2017

    • Author(s)
      浦田真次、岡部繁男、山岨達也
    • Organizer
      第40回神経科学会
    • Related Report
      2017 Annual Research Report
  • [Patent(Industrial Property Rights)] 生物試料の透明化方法2016

    • Inventor(s)
      山岨達也
    • Industrial Property Rights Holder
      山岨達也
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2016-178127
    • Filing Date
      2016-09-13
    • Related Report
      2016 Research-status Report

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Published: 2016-04-21   Modified: 2019-03-29  

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