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Exome sequencing of cancer related genes to identify genetic markers for sensitivity to cytotoxic anticancer drugs

Research Project

Project/Area Number 16K18445
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Tumor diagnostics
Research InstitutionJapanese Foundation for Cancer Research

Principal Investigator

Udagawa Chihiro  公益財団法人がん研究会, がんプレシジョン医療研究センター, 客員研究員 (20774160)

Research Collaborator ZEMBUTSU Hitoshi  公益財団法人がん研究会, がんプレシジョン医療研究センター リキッドバイオプシー診断開発プロジェクト, プロジェクトリーダー (90372820)
Project Period (FY) 2016-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2017: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2016: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywordspharmacogenomics / xenograft / 抗がん剤 / precision medicine / バイオマーカー / 癌 / PGx
Outline of Final Research Achievements

In the current study, to identify genetic markers for sensitivity or resistance to 9 cytotoxic anticancer drugs, all exons of 409 genes associated with cancer from 79 cancer xenografts in mice that had been established from 12 different human organs were sequenced. The association between single nucleotide variants (SNVs) detected in the xenografts and sensitivities to the 9 cytotoxic anticancer drugs were then investigated using a nonparametric approach. We identified 35 SNVs associated with sensitivities to one or more of the nine anticancer drugs. These findings provide novel insights which may benefit the development of personalized anticancer therapy for patients with cancer in the future.

Report

(3 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • Research Products

    (4 results)

All 2018 2017 2016

All Journal Article (1 results) (of which Peer Reviewed: 1 results,  Open Access: 1 results) Presentation (3 results) (of which Int'l Joint Research: 2 results)

  • [Journal Article] Targeted sequencing reveals genetic variants associated with sensitivity of 79 human cancer xenografts to anticancer drugs.2018

    • Author(s)
      Udagawa C, Sasaki Y, Suemizu H, Ohnishi H, Tokino T, Zembutsu H
    • Journal Title

      Experimental and Therapeutic Medicine

      Volume: 15 Pages: 1339-1359

    • DOI

      10.3892/etm.2017.5533

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] Exome sequencing of cancer related genes to identify genetic markers for sensitivity to cytotoxic anticancer drugs2017

    • Author(s)
      Udagawa C, Sasaki Y, Suemizu H, Ohnishi Y, Ohnishi H, Tokino T, Zembutsu H.
    • Organizer
      AACR Annual Meeting 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Exome sequencing of cancer related genes to identify genetic markers for sensitivity to cytotoxic anticancer drugs2016

    • Author(s)
      Chihiro Udagawa, Takashi Tokino, Yasushi Sasaki, Bunsyo Shiotani, Yasuyuki Ohnishi, Hiroshi Suemizu and Hitoshi Zembutsu
    • Organizer
      The American Society of Human Genetics Meeting 2016
    • Place of Presentation
      Vancouver (Canada)
    • Year and Date
      2016-10-16
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Exome sequencing of cancer related genes to identify genetic markers for sensitivity to cytotoxic anticancer drugs2016

    • Author(s)
      Chihiro Udagawa, Takashi Tokino, Yasushi Sasaki, Bunsyo Shiotani, Yasuyuki Ohnishi, Hiroshi Suemizu and Hitoshi Zembutsu
    • Organizer
      第75回日本癌学会
    • Place of Presentation
      パシフィコ横浜(神奈川・横浜)
    • Year and Date
      2016-10-06
    • Related Report
      2016 Research-status Report

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Published: 2016-04-21   Modified: 2019-03-29  

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