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Mechanisms of human LINE-1 retrotransposition

Research Project

Project/Area Number 16K18471
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Genome biology
Research InstitutionKyoto University

Principal Investigator

Miyoshi Tomoichiro  京都大学, 生命科学研究科, 准教授 (60378841)

Project Period (FY) 2016-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2017: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Fiscal Year 2016: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Keywordsヒトゲノム / 転移因子 / LINE-1 / DNA修復 / ゲノム恒常性 / L1 / レトロトランスポゾン / ゲノム / 転移 / 遺伝学 / 進化
Outline of Final Research Achievements

Retrotransposons, mobile genetic elements, mobilize to other genomic loci. It can act as a mutagen inducing several diseases including cancer. However, it remains to be solved how these elements have spread out into the genome for a long evolutionary time scale. This study focused on the mechanisms of retrotransposition of LINE-1, which is actively and currently retrotransposed in the human genome. It have been so far demonstrated that diverse DNA repair factors form a complex with LINE-1 and that PARP1 and PARP2 among the interactors especially play a vital role in LINE-1 retrotransposition. These data also suggest a new model in which these DNA repair factors fix DNA breaks induced by LINE-1 by recruiting another DNA repair protein during the retrotransposition cycle.

Report

(3 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • Research Products

    (5 results)

All 2017 2016

All Journal Article (2 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 1 results,  Open Access: 1 results,  Acknowledgement Compliant: 1 results) Presentation (3 results)

  • [Journal Article] Local potentiation of stress-responsive genes by upstream noncoding transcription.2016

    • Author(s)
      Takemata N, Oda A, Yamada T, Galipon J, Miyoshi T, Suzuki Y, Sugano S, Hoffman CS, Hirota K, Ohta K.
    • Journal Title

      Nucleic Acids Res.

      Volume: 印刷中 Issue: 11 Pages: 5174-89

    • DOI

      10.1093/nar/gkw142

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] LEAP: LINE-1 Element Amplification Protocol2016

    • Author(s)
      Kopera H.C., Flasch D.A., Nakamura M., Miyoshi T., Doucet A.J., Moran J.V.
    • Journal Title

      Methods Mol. Biol.

      Volume: 1400 Pages: 339-355

    • DOI

      10.1007/978-1-4939-3372-3_21

    • ISBN
      9781493933709, 9781493933723
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] ヒトL1レトロトランスポゾンの転移機構2017

    • Author(s)
      三好 知一郎、John V. Moran
    • Organizer
      第35回 染色体ワークショップ
    • Related Report
      2017 Annual Research Report
  • [Presentation] 宿主DNA修復因子を利用したヒト転移因子LINE-1の転移機構2017

    • Author(s)
      三好 知一郎
    • Organizer
      第19回 京都大学生命科学研究科シンポジウム
    • Related Report
      2017 Annual Research Report
  • [Presentation] Identification and Characterization of Host Proteins that Interact with the Human LINE-1 ORF2-encoded Protein2016

    • Author(s)
      三好 知一郎、John V. Moran
    • Organizer
      日本分子生物学会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2016-11-30
    • Related Report
      2016 Research-status Report

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Published: 2016-04-21   Modified: 2019-03-29  

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