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Biochemical study of a splicing factor Sde2

Research Project

Project/Area Number 16K18490
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Molecular biology
Research InstitutionKobe University

Principal Investigator

Otani Junji  神戸大学, 医学研究科, 特命助教 (10770878)

Project Period (FY) 2016-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2017: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Fiscal Year 2016: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Keywordsスプライシング / ヘテロクロマチン / N末端則 / スプライソソーム
Outline of Final Research Achievements

Post-translational modification by ubiquitin and several ubiquitin like protein modifiers controls diverse cellular processes. There are many proteins carrying the protein domains structurally similar to ubiquitin without the ability to form covalent linkage. Sde2 was first identified as a factor involved in gene silencing at telomere in Schizosaccharomyces pombe and later found to be required for mRNA splicing. In this study, we showed that the evolutionary conserved ubiquitin like domain (Ubl) of Sde2 at its N-terminus is cleaved off in S. pombe and also in human cells. We found that the Ubl itself is dispensable but the newly exposed neo N-terminus after removal of the Ubl is important for mRNA splicing.

Report

(3 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • Research Products

    (2 results)

All 2017 2016

All Journal Article (1 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 1 results,  Open Access: 1 results) Presentation (1 results)

  • [Journal Article] RFTS-dependent negative regulation of Dnmt1 by nucleosome structure and histone tails.2017

    • Author(s)
      Mishima Y, Brueckner L, Takahashi S, Kawakami T, Arita K, Oka S, Otani J, Hojo H, Shirakawa M, Shinohara A, Watanabe M, Suetake I
    • Journal Title

      FEBS J.

      Volume: 284 Issue: 20 Pages: 3455-3469

    • DOI

      10.1111/febs.14205

    • NAID

      120006537075

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] Sde2のユビキチン様蛋白質ドメインの切断は機能に必要である2016

    • Author(s)
      大谷淳二 石川冬木
    • Organizer
      第39回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2016-11-30
    • Related Report
      2016 Research-status Report

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Published: 2016-04-21   Modified: 2019-03-29  

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