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Identification and functional analysis of loci involved in transformation amenability in barley

Research Project

Project/Area Number 16K18634
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Science in genetics and breeding
Research InstitutionOkayama University

Principal Investigator

Hisano Hiroshi  岡山大学, 資源植物科学研究所, 准教授 (70415454)

Research Collaborator SATO Kazuhiro  岡大植物研
MUNEMORI Hiromi  岡大植物研
SHINKAI Norio  産総研
SESE Jun  産総研
TOYODA Atsushi  遺伝研
SEKI Masahide  東大新領域
SUZUKI Yutaka  東大新領域
Project Period (FY) 2016-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2018: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2017: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2016: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywordsオオムギ / 形質転換 / 再分化 / カルス化 / カルス / 準同質遺伝子系統 / QTLマッピング / DNAマーカー / 育種学 / 遺伝学
Outline of Final Research Achievements

In this study, we tried to narrow down the regions of TFA (Transformation amenability) loci involved in transformation efficiency in barley in order to enable genetic transformation without limitation of their genotypes. First, SNPs array analysis and exome-sequence analysis were performed to develop the selection markers for TFAs. These markers were used to generate the near-isogenic lines of TFAs derived from a cross between barley cultivar “Haruna Nijo” and “Golden Promise” (GP). Subsequently, the transformation experiment was carried out using the doubled-haploid lines derived from a cross between barley cultivar "Full Pint" and GP to clarify that TFAs were necessary for barley transformation.

Academic Significance and Societal Importance of the Research Achievements

本研究では、オオムギの形質転換効率に関わる遺伝子座TFAの機能の確認、領域の絞り込みおよび領域内に存在する発現遺伝子の確認をすることができた。今後、TFAの原因遺伝子を単離して、それらを制御することにより、多くのオオムギ品種で形質転換が可能となる。このことにより、効率よくオオムギの有用遺伝子の機能解析が可能となり、植物育種への利用も期待できる。本成果は、ゲノム編集等のオオムギ遺伝子改変技術への応用のみならず、他の近縁作物へ適用可能と考えられ、植物科学全体の発展に貢献するであろう。

Report

(4 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • 2016 Research-status Report
  • Research Products

    (27 results)

All 2019 2018 2017 2016 Other

All Int'l Joint Research (3 results) Journal Article (4 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 4 results,  Open Access: 3 results,  Acknowledgement Compliant: 2 results) Presentation (17 results) (of which Int'l Joint Research: 4 results,  Invited: 3 results) Remarks (1 results) Patent(Industrial Property Rights) (2 results) (of which Overseas: 1 results)

  • [Int'l Joint Research] Washington State University/Oregon State University(米国)

    • Related Report
      2016 Research-status Report
  • [Int'l Joint Research] The Sainsbury Laboratory(英国)

    • Related Report
      2016 Research-status Report
  • [Int'l Joint Research] Estacion Experimental de Aula Dei(スペイン)

    • Related Report
      2016 Research-status Report
  • [Journal Article] Imaging Amyloplasts in the Developing Endosperm of Barley and Rice.2019

    • Author(s)
      Matsushima, R., Hisano, H.
    • Journal Title

      Scientific Reports

      Volume: 9 Issue: 1 Pages: 3745-3745

    • DOI

      10.1038/s41598-019-40424-w

    • NAID

      120006777518

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Agrobacterium tumefaciens Enhances Biosynthesis of Two Distinct Auxins in the Formation of Crown Galls2019

    • Author(s)
      Mashiguchi Kiyoshi、Hisano Hiroshi、Takeda-Kamiya Noriko、Takebayashi Yumiko、Ariizumi Tohru、Gao Yangbin、Ezura Hiroshi、Sato Kazuhiro、Zhao Yunde、Hayashi Ken-ichiro、Kasahara Hiroyuki
    • Journal Title

      Plant and Cell Physiology

      Volume: 60 Issue: 1 Pages: 29-37

    • DOI

      10.1093/pcp/pcy182

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Selection of transformation-efficient barley genotypes based on TFA (transformation amenability) haplotype and higher resolution mapping of the TFA loci2017

    • Author(s)
      Hisano, H., Meints, B., Moscou, M.J., Cistue, L., Echávarri, B., Sato, K. and Hayes, P.M.
    • Journal Title

      Plant Cell Reports

      Volume: 36 Issue: 4 Pages: 611-620

    • DOI

      10.1007/s00299-017-2107-2

    • NAID

      120006425838

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Genomic regions responsible for amenability to Agrobacterium-mediated transformation in barley2016

    • Author(s)
      Hisano, H. and Sato, K.
    • Journal Title

      Scientific Reports

      Volume: 6 Issue: 1 Pages: 37505-37505

    • DOI

      10.1038/srep37505

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] Identification and application of TFA genomic regions that confer transformation amenability in barley.2018

    • Author(s)
      Hiroshi Hisano, Hiromi Munemori, Kazuhiro Sato
    • Organizer
      2nd International Barley Mutant Workshop
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 品種の壁を越える:オオムギの形質転換や再分化を可能にするゲノム領域の同定2018

    • Author(s)
      久野 裕
    • Organizer
      日本植物学会第82回大会・シンポジウム
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] 幹細胞化関連遺伝子を過剰発現する形質転換オオムギカルスにおいて発現変動する遺伝子の検出2018

    • Author(s)
      久野裕・宗森広美・関真秀・鈴木穣・佐藤和広.
    • Organizer
      第13回ムギ類研究会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 幹細胞化関連遺伝子を過剰発現するオオムギカルスにおける網羅的遺伝子発現解析2018

    • Author(s)
      久野裕・宗森広美・関真秀・鈴木穣・佐藤和広
    • Organizer
      第10回中国地域育種談話会
    • Related Report
      2018 Annual Research Report
  • [Presentation] オオムギの遺伝子改変技術の現状と将来展望2018

    • Author(s)
      久野裕
    • Organizer
      第1 回オオムギ資源開発研究セミナー
    • Related Report
      2018 Annual Research Report
  • [Presentation] 形質転換能遺伝子座に関わるオオムギ準同質遺伝子系統の開発2018

    • Author(s)
      久野 裕・宗森 広美・佐藤 和広
    • Organizer
      日本育種学会第133回講演会
    • Related Report
      2017 Research-status Report
  • [Presentation] オオムギの形質転換効率に関わる遺伝子単離に向けたDNAマーカー開発2017

    • Author(s)
      久野 裕・宗森 広美・元井 由加・新海 典夫・瀬々 潤・豊田 敦・佐藤 和広
    • Organizer
      日本育種学会第131回講演会
    • Place of Presentation
      名古屋市
    • Year and Date
      2017-03-29
    • Related Report
      2016 Research-status Report
  • [Presentation] Identification of TFA genomic regions that confer amenability to Agrobacterium-mediated transformation in barley2017

    • Author(s)
      Hiroshi Hisano
    • Organizer
      PAGXXV2017 (Plant and Animal Genome)
    • Place of Presentation
      San Diego, CA, U.S.A.
    • Year and Date
      2017-01-14
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] TFA genomic regions confer amenability to Agrobacterium-mediated transformation in barley2017

    • Author(s)
      Hisano, H. and Sato K.
    • Organizer
      PAGXXV2017 (Plant and Animal Genome)
    • Place of Presentation
      San Diego, CA, U.S.A.
    • Year and Date
      2017-01-14
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] 品種の壁を越える: オオムギの形質転換に必要なゲノム領域の探索と利用2017

    • Author(s)
      久野 裕
    • Organizer
      第35回日本植物細胞分子生物学会(さいたま)大会 シンポジウム
    • Related Report
      2017 Research-status Report
    • Invited
  • [Presentation] Baby boom1 ならびに Wuschel2 に制御されるオオムギ遺伝子の単離2017

    • Author(s)
      久野 裕・宗森 広美・西村 秀希・佐藤 和広
    • Organizer
      日本育種学会第132回講演会
    • Related Report
      2017 Research-status Report
  • [Presentation] オオムギの形質転換効率に関する遺伝学的解析2017

    • Author(s)
      久野裕・宗森広美・元井由加・佐藤和広
    • Organizer
      第9回中国地域育種談話会
    • Related Report
      2017 Research-status Report
  • [Presentation] オオムギの形質転換能に関わるゲノム領域の同定2017

    • Author(s)
      久野 裕・Patrick M. Hayes・佐藤 和広
    • Organizer
      第40回分子生物学会年会
    • Related Report
      2017 Research-status Report
  • [Presentation] 品種の壁を越える:オオムギの形質転換効率に関わる遺伝子座の同定とその利用2017

    • Author(s)
      久野 裕
    • Organizer
      第12回ムギ類研究会
    • Related Report
      2017 Research-status Report
  • [Presentation] 形質転換可能なオオムギ系統を作る方法2016

    • Author(s)
      久野 裕・安東 広美・元井 由加・Patrick M. Hayes・佐藤 和広
    • Organizer
      日本育種学会第130回講演会
    • Place of Presentation
      鳥取市
    • Year and Date
      2016-09-24
    • Related Report
      2016 Research-status Report
  • [Presentation] オオムギの形質転換効率に関わるゲノム領域の特定2016

    • Author(s)
      久野 裕・安東 広美・元井 由加・佐藤 和広
    • Organizer
      第34回日本植物細胞分子生物学会
    • Place of Presentation
      上田市
    • Year and Date
      2016-09-01
    • Related Report
      2016 Research-status Report
  • [Presentation] Identification of the genomic region responding to amenability of Agrobacterium-mediated transformation in barley2016

    • Author(s)
      Hisano, H., Motoi, Y. and Sato K.
    • Organizer
      12th International Barley Genetics Symposium
    • Place of Presentation
      Minneapolis, MN, U.S.A.
    • Year and Date
      2016-06-26
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Remarks] 岡山大学資源植物科学研究所 作物イノベーション研究チーム -オオムギ遺伝子改変班-

    • URL

      http://www.rib.okayama-u.ac.jp/bgm/

    • Related Report
      2018 Annual Research Report
  • [Patent(Industrial Property Rights)] 形質転換感受性のオオムギの作出方法2017

    • Inventor(s)
      佐藤和広、久野裕
    • Industrial Property Rights Holder
      佐藤和広、久野裕
    • Industrial Property Rights Type
      特許
    • Filing Date
      2017
    • Related Report
      2017 Research-status Report
    • Overseas
  • [Patent(Industrial Property Rights)] 形質転換感受性のオオムギの作出方法2016

    • Inventor(s)
      佐藤和広、久野裕
    • Industrial Property Rights Holder
      佐藤和広、久野裕
    • Industrial Property Rights Type
      特許
    • Filing Date
      2016-06-23
    • Related Report
      2016 Research-status Report

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Published: 2016-04-21   Modified: 2022-02-21  

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