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Development of culture method for activation of silent gene expression in actinomycetes

Research Project

Project/Area Number 16K18678
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Applied microbiology
Research InstitutionKochi University

Principal Investigator

Ulanova Dana  高知大学, 教育研究部総合科学系複合領域科学部門, 講師 (70610129)

Project Period (FY) 2016-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2018: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2017: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Fiscal Year 2016: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Keywords放線菌 / 天然化合物 / 生合成 / 遺伝子 / 休眠遺伝子 / 応用微生物 / 抗生物質
Outline of Final Research Achievements

Bacteria belonging to actinomycete group present a rich source of novel bioactive compounds. These compounds are often used in medicine, agriculture and other fields. However, most bioactive compounds which respective biosynthetic genes are found in actinomycetal genomes are not produced under laboratory conditions. This research aimed to search for such silent genes and respective compounds in marine actinomycetes and trigger their expression by optimization of cultivation conditions.
As the result, one potentially novel polyketide derivative has been isolated and its candidate biosynthetic gene cluster was found in the genome of the producer. Conditions necessary for compound production activation were analyzed and may be applied in future for cultivation of other actinomycete strains.

Academic Significance and Societal Importance of the Research Achievements

本研究で得られる成果を用いることにより、海洋放線菌だけではなく、陸上放線菌の休眠している生合成遺伝子の発現にも応用する予定であり、新規天然化合物の発見と新規創薬シード開発に繋がるものと期待される。

Report

(4 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • 2016 Research-status Report
  • Research Products

    (13 results)

All 2019 2018 2017 2016 Other

All Int'l Joint Research (4 results) Journal Article (1 results) (of which Peer Reviewed: 1 results) Presentation (6 results) (of which Int'l Joint Research: 2 results) Remarks (2 results)

  • [Int'l Joint Research] 微生物学研究所(チェコ)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] オランダ生態研究所(オランダ)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] 微生物学研究所(チェコ)

    • Related Report
      2017 Research-status Report
  • [Int'l Joint Research] 微生物学研究所(チェコ)

    • Related Report
      2016 Research-status Report
  • [Journal Article] Effects of trace metal ions on secondary metabolism and morphological development of streptomycetes2016

    • Author(s)
      1. Locatelli FM, Goo KS, and Ulanova D
    • Journal Title

      Metallomics

      Volume: 8 Issue: 5 Pages: 469-480

    • DOI

      10.1039/c5mt00324e

    • Related Report
      2016 Research-status Report
    • Peer Reviewed
  • [Presentation] Isolation of actinomycetes from deep-sea sediments of the Pacific Ocean2019

    • Author(s)
      Ulanova D
    • Organizer
      日本農芸化学会2019年度大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Isolation of Salinispora sp. from deep-sea sediments of the Shikoku Basin2018

    • Author(s)
      Ulanova D
    • Organizer
      第33回日本放線菌学会大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Secondary metabolite biosynthetic genes in extremophiles diversity and distribution patterns2018

    • Author(s)
      Ulanova D, Locatelli FM
    • Organizer
      17th International Symposium on Microbial Ecology
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 海底堆積物からの放線菌の単離と二次代謝産物の生合成遺伝子研究2018

    • Author(s)
      Ulanova D, Sakurai T
    • Organizer
      第32回海洋生物活性談話会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Analysis of secondary metabolic potential of actinomycetes from marine core samples2017

    • Author(s)
      Ulanova, D., Goo, KS, Bakal, T.
    • Organizer
      18th International Symposium on the Biology of Actinomycetes
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] Application of advanced NMR techniques for analysis of actinobacterial metabolism2016

    • Author(s)
      Ulanova D., Tsuda M.
    • Organizer
      第68 回日本生物工学会大会
    • Place of Presentation
      ANAクラウンプラザホテル富山
    • Year and Date
      2016-09-29
    • Related Report
      2016 Research-status Report
  • [Remarks] http://www.cc.kochi-u.ac.jp/~ulanova/index.html

    • Related Report
      2017 Research-status Report
  • [Remarks] http://www.cc.kochi-u.ac.jp/~ulanova/index.html

    • Related Report
      2016 Research-status Report

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Published: 2016-04-21   Modified: 2024-01-30  

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