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Searching for functional genes that caused adaptive differentiation of two varieties of the genus Thujopsis between the Pacific Ocean side and the Japan Sea side areas

Research Project

Project/Area Number 16K18723
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Forest science
Research InstitutionForest Research and Management Organization (2017)
Akita Prefectural University (2016)

Principal Investigator

Inanaga Michiko  国立研究開発法人森林研究・整備機構, 森林総合研究所林木育種センター, 研究員 (30757951)

Project Period (FY) 2016-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2017: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2016: ¥2,600,000 (Direct Cost: ¥2,000,000、Indirect Cost: ¥600,000)
Keywordsアスナロ属 / 局所適応 / トランスクリプトーム解析 / RNA-seq / 低温順化 / クロロフィル蛍光 / 森林遺伝学 / 生態学
Outline of Final Research Achievements

Genus Thujopsis is one of the conifer groups endemic in Japan, and the genus consists of two varieties, namely Thujopsis dolabrata var. dolabrata, which distributes mainly along the Pacific Ocean side of the Japanese archipelago, and var. hondai, mainly along the Japan Sea side. As they have quite different distribution ranges, these varieties may be genetically differentiated due to local adaptation. The purpose of this study is searching for genes differentiated between the varieties by transcriptome analysis. The gene expression analysis of leaf samples collected in early January found higher expression of the genes related to disease and stress resistance in var. hondai, while higher expressions of the genes related to flower regulation and flowering were found in var. dolabrata. Based on these results, the two varieties of T. dolabrata may have different response mechanisms to the environmental condition.

Report

(3 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • Research Products

    (3 results)

All 2018 2017

All Presentation (3 results)

  • [Presentation] アスナロ属の低温順化過程における遺伝子発現パターンの産地間比較2018

    • Author(s)
      稲永路子、高田克彦
    • Organizer
      第129回日本森林学会大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 石川県産ヒバ(クサアテ)1個体の低温順化過程における遺伝子発現解析2017

    • Author(s)
      稲永路子、高田克彦
    • Organizer
      森林遺伝育種学会第6回大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] クロロフィル蛍光測定を応用したヒバの耐凍性獲得過程の評価2017

    • Author(s)
      稲永路子、高田克彦
    • Organizer
      日本森林学会
    • Place of Presentation
      鹿児島大学(鹿児島県鹿児島市)
    • Related Report
      2016 Research-status Report

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Published: 2016-04-21   Modified: 2019-03-29  

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