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Structural basis for hepatitis B virus infection

Research Project

Project/Area Number 16K18866
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Physical pharmacy
Research InstitutionKeio University

Principal Investigator

Yokogawa Mariko  慶應義塾大学, 薬学部(芝共立), 助教 (60648020)

Project Period (FY) 2016-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2017: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2016: ¥2,860,000 (Direct Cost: ¥2,200,000、Indirect Cost: ¥660,000)
KeywordsHBV / 溶液NMR / B型肝炎ウイルス / NMR / 構造生物学 / B型肝炎ウィルス / X線結晶構造解析 / ウイルス / 膜タンパク質
Outline of Final Research Achievements

Chronic hepatitis B is a global health problem caused by the hepatitis B virus (HBV) infection, which leads to liver cancer and liver cirrhosis. There are two types of drugs for the treatment of HBV infection: nucleotide analogue and interferon. However, these drugs can hardly eliminate HBV completely from the infected cells. Aim of this study was to obtain structural basis for HBV infection useful for the treatment of HBV infection.
The preS, preS1, and preS2 regions of the surface protein of HBV, which are important for infection, were prepared in large quantities for structural analyses. Assignments of NMR signals derived from preS, preS1, and preS2 were successfully established, which can be used for residue specific analyses of the interaction with NTCP, the HBV receptor specifically expressed in liver. After the examination of some expression vectors, E. coli expression of NTCP was achieved.

Report

(3 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • Research Products

    (22 results)

All 2018 2017 2016

All Journal Article (7 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 7 results,  Open Access: 3 results,  Acknowledgement Compliant: 1 results) Presentation (15 results) (of which Int'l Joint Research: 6 results)

  • [Journal Article] Structural basis for the ethanol action on G-protein?activated inwardly rectifying potassium channel 1 revealed by NMR spectroscopy2018

    • Author(s)
      Toyama Yuki、Kano Hanaho、Mase Yoko、Yokogawa Mariko、Osawa Masanori、Shimada Ichio
    • Journal Title

      Proceedings of the National Academy of Sciences

      Volume: 115 Issue: 15 Pages: 3858-3863

    • DOI

      10.1073/pnas.1722257115

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Characterization of the multimeric structure of poly(A)-binding protein on a poly(A) tail2018

    • Author(s)
      Sawazaki Ryoichi、Imai Shunsuke、Yokogawa Mariko、Hosoda Nao、Hoshino Shin-ichi、Mio Muneyo、Mio Kazuhiro、Shimada Ichio、Osawa Masanori
    • Journal Title

      Scientific Reports

      Volume: 8 Issue: 1 Pages: 1455-1455

    • DOI

      10.1038/s41598-018-19659-6

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Nuclear Magnetic Resonance Approaches for Characterizing Protein-Protein Interactions2017

    • Author(s)
      Toyama Yuki、Mase Yoko、Kano Hanaho、Yokogawa Mariko、Osawa Masanori、Shimada Ichio
    • Journal Title

      Methods in Molecular Biology (invited review)

      Volume: 1684 Pages: 115-128

    • DOI

      10.1007/978-1-4939-7362-0_10

    • ISBN
      9781493973613, 9781493973620
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Dynamic regulation of GDP binding to G proteins revealed by magnetic field-dependent NMR relaxation analyses2017

    • Author(s)
      Yuki Toyama, Hanaho Kano, Yoko Mase, Mariko Yokogawa, Masanori Osawa, Ichio Shimada
    • Journal Title

      Nat. Commun.

      Volume: 8 Issue: 1 Pages: 14523-14523

    • DOI

      10.1038/ncomms14523

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Structural basis for the regulation of enzymatic activity of Regnase-1 by domain-domain interactions.2016

    • Author(s)
      Yokogawa M., Tsushima T., Noda NN., Kumeta H., Enokizono Y., Yamashita K., Standley DM., Takeuchi O., Akira S., and Inagaki F.
    • Journal Title

      Scientific Reports

      Volume: 6 Issue: 1 Pages: 22324-22324

    • DOI

      10.1038/srep22324

    • NAID

      120005818281

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] NMR Method for Characterizing Microsecond-to-Millisecond Chemical Exchanges Utilizing Differential Multiple-Quantum Relaxation in High Molecular Weight Proteins.2016

    • Author(s)
      Toyama Y., Osawa M., Yokogawa M., and Shimada I.
    • Journal Title

      J. Am. Chem. Soc.

      Volume: 138(7) Issue: 7 Pages: 2302-2311

    • DOI

      10.1021/jacs.5b12954

    • NAID

      40021421900

    • Related Report
      2016 Research-status Report
    • Peer Reviewed
  • [Journal Article] Nuclear magnetic resonance analysis of the conformational state of cancer mutant of fibroblast growth factor receptor 1 tyrosine kinase domain.2016

    • Author(s)
      Kobashigawa Y., Amano S., Yoza K., Himeno R., Amemiya S., Morioka H., Yokogawa M., Kumeta H., Schlessinger J., and Inagaki F.
    • Journal Title

      Genes to Cells

      Volume: 21(4) Issue: 4 Pages: 350-357

    • DOI

      10.1111/gtc.12345

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Presentation] B型肝炎ウイルスの粒子形成機構の解明2018

    • Author(s)
      横川 真梨子、石場 智彬、池田 寿子、藤田 浩平、横田 旭美、大澤 匡範
    • Organizer
      日本薬学会 第138年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 電位依存性カリウムイオンチャネルhERGの閉状態の安定化による、hERG開閉機構の構造生物学的解明2018

    • Author(s)
      松村 一輝、簗瀬 尚美、秋元 まどか、岩崎 菜々美、坂本 多穗、黒川 洵子、横川 真梨子、大澤 匡範
    • Organizer
      日本薬学会 第138年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Dynamic regulation of GDP binding to G proteins revealed by magnetic field-dependent NMR relaxation analyses2017

    • Author(s)
      Yuki Toyama, Hanaho Kano, Yoko Mase, Mariko Yokogawa, Masanori Osawa and Ichio Shimada
    • Organizer
      ENC 2017 - 58th Experimental Nuclear Magnetic Resonance Conference
    • Place of Presentation
      Asilomar, California(USA)
    • Year and Date
      2017-03-26
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] B型肝炎ウイルスの粒子形成機構の解明2017

    • Author(s)
      横川 真梨子、石場 智彬、池田 寿子、藤田 浩平、横田 旭美、大澤 匡範
    • Organizer
      生命科学系学会合同年次大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] ポリA上のPABP多量体による翻訳調節メカニズムの解明2017

    • Author(s)
      沢崎 綾一、今井 駿輔、横川 真梨子、細田 直、星野 真一、三尾 和弘、三尾 宗代、嶋田 一夫、大澤 匡範
    • Organizer
      生命科学系学会合同年次大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 電位依存性プロトンチャネルVSOP/Hv1のアラキドン酸による活性化促進機構の解明2017

    • Author(s)
      松葉 広昭、横川 真梨子、木村 友美、望月 綾野、川鍋 陽、岡村 康司、嶋田 一夫、大澤 匡範
    • Organizer
      生命科学系学会合同年次大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 緩和速度の磁場依存性解析によるGタンパク質へのGDP結合の動的制御機構の解明2017

    • Author(s)
      外山 侑樹,加納 花穂, 間瀬 瑤子, 横川 真梨子, 大澤匡範,嶋田一夫
    • Organizer
      第56回NMR討論会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Dynamic regulation of GDP binding to G proteins revealed by magnetic field-dependent NMR relaxation analyses2017

    • Author(s)
      Hanaho Kano, Yuki Toyama, Yoko Mase, Mariko Yokogawa, Masanori Osawa, Ichio Shimada
    • Organizer
      2017 Taiwan-Japan Biomedical Symposium on Magnetic Resonance
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Gタンパク質のファミリー選択的なK+チャネル活性制御機構の解明2017

    • Author(s)
      加納 花穂, 外山 侑樹, 岩橋 優太, 間瀬 瑶子, 横川 真梨子, 大澤 匡範, 嶋田 一夫
    • Organizer
      第17回日本蛋白質科学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Developments and applications of multiple quantum NMR methods to characterize functional dynamics of high molecular weight proteins2016

    • Author(s)
      Yuki Toyama, Hanaho Kano, Yoko Mase, Mariko Yokogawa, Masanori Osawa, Ichio Shimada
    • Organizer
      第54回日本生物物理学会
    • Place of Presentation
      つくば国際会議場(茨城県つくば市)
    • Year and Date
      2016-11-25
    • Related Report
      2016 Research-status Report
  • [Presentation] Structural basis for the regulation of enzymatic activity of Regnase1 by domain-domain interactions2016

    • Author(s)
      Mariko Yokogawa, Takashi Tsushima, Nobuo N Noda, Hiroyuki Kumeta, Yoshiaki Enokizono, Kazuo Yamashita, Daron M Standley, Osamu Takeuchi, Shizuo Akira, Fuyuhiko Inagaki
    • Organizer
      第42回内藤コンファレンス
    • Place of Presentation
      シャトレーゼガトーキングダムサッポロ(北海道札幌市)
    • Year and Date
      2016-10-04
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Structural Basis for the Regulation of Enzymatic Activity of Regnase-1 by Domain-Domain Interactions2016

    • Author(s)
      Mariko Yokogawa, Takashi Tsushima, Nobuo N. Noda, Hiroyuki Kumeta, Yoshiaki Enokizono, Kazuo Yamashita, Daron M. Standley, Osamu Takeuchi, Shizuo Akira, and Fuyuhiko Inagaki
    • Organizer
      The 27th International Conference on Magnetic Resonance in Biological Systems
    • Place of Presentation
      国立京都国際会館(京都府京都市)
    • Year and Date
      2016-08-21
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Structural Characterization of PABP Multimerization on Poly(A) Tail2016

    • Author(s)
      Ryoichi Sawazaki, Shunsuke Imai, Mariko Yokogawa, Yoko Usui, Takeru Sagae, Shin-ichi Hoshino, Ichio Shimada, Masanori Osawa
    • Organizer
      The 27th International Conference on Magnetic Resonance in Biological Systems
    • Place of Presentation
      国立京都国際会館(京都府京都市)
    • Year and Date
      2016-08-21
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] NMR method for characterizing microsecond-to-millisecond chemical exchanges utilizing differential multiple-quantum relaxation in high molecular weight proteins2016

    • Author(s)
      Yuki Toyama, Masanori Osawa, Mariko Yokogawa, and Ichio Shimada
    • Organizer
      The 27th International Conference on Magnetic Resonance in Biological Systems
    • Place of Presentation
      国立京都国際会館(京都府京都市)
    • Year and Date
      2016-08-21
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] NMR method for characterizing microsecond-to-millisecond chemical exchanges utilizing differential multiple-quantum relaxation in high molecular weight proteins2016

    • Author(s)
      外山侑樹, 大澤匡範, 横川真梨子, 嶋田一夫
    • Organizer
      第16回 東京大学生命科学シンポジウム
    • Place of Presentation
      東京大学(東京都文京区)
    • Year and Date
      2016-04-23
    • Related Report
      2016 Research-status Report

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Published: 2016-04-21   Modified: 2019-03-29  

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