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enome-wide DNA methylation profiling identifies primary central nervous system lymphomas as a distinct entity from systemic diffuse large B-cell lymphomas

Research Project

Project/Area Number 16K20019
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Neurosurgery
Research InstitutionYokohama City University

Principal Investigator

NAKAMURA Taishi  横浜市立大学, 医学部, 助教 (60771615)

Research Collaborator ICHIMURA Koichi  
YAMASHITA Satoshi  
Project Period (FY) 2016-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2017: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2016: ¥2,990,000 (Direct Cost: ¥2,300,000、Indirect Cost: ¥690,000)
KeywordsPCNSL / DLBCL / CpG island / DNA methylation / CpGアイランド / DNAメチル化 / 中枢神経系原発悪性リンパ腫 / びまん性大細胞型B細胞リンパ腫 / Methylation / epigenome
Outline of Final Research Achievements

Based on the notion that DNA methylation profiles better represent the underlying biology of cells, we performed a 450K methylation analysis in a large series of PCNSL and compared with that of systemic DLBCLs. Our results showed that PCNSL have distinct DNA methylation profiles compared with systemic DLBCLs, while a subset of systemic DLBCL shared a similar methylation profile with PCNSL, suggesting that PCNSL may have developed from those DLBCL that acquired hypermethylation and higher affinity in CNS. We propose that PCNSL originates from mature B cells outside CNS and belongs to a distinct lymphoma entity from the majority of systemic DLBCL. This report was accepted for publication in Acta Neuropathologica (IF 12.213 2016/2017) (Accepted: 24 December 2016 / Published online: 5 January 2017).

Report

(3 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • Research Products

    (2 results)

All 2017

All Journal Article (2 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 1 results,  Open Access: 1 results)

  • [Journal Article] Genome-wide DNA methylation profiles identifies primary central nervous system lymphomas as a distinct entity from systemic diffuse large B-cell lymphomas2017

    • Author(s)
      Nakamura T, Yamashita S, Fukumura K, Tanaka K, Nagane M, Narita Y, Mano H, Ushijima T, Ichimura K
    • Journal Title

      Acta Neuropathol

      Volume: 133 Issue: 2 Pages: 321-324

    • DOI

      10.1007/s00401-016-1664-8

    • Related Report
      2017 Annual Research Report 2016 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] CNS リンパ腫の遺伝子変異2017

    • Author(s)
      中村大志 市村幸一
    • Journal Title

      腫瘍内科= Clinical oncology

      Volume: 11 Pages: 441-447

    • NAID

      40021393762

    • Related Report
      2017 Annual Research Report

URL: 

Published: 2016-04-21   Modified: 2019-03-29  

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