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Is adipose differentiation-related alternative splicing the essential event for differentiation?

Research Project

Project/Area Number 16K21125
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Biological pharmacy
General medical chemistry
Research InstitutionRitsumeikan University

Principal Investigator

Masaki So  立命館大学, 薬学部, 助教 (70711977)

Project Period (FY) 2016-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2017: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2016: ¥2,600,000 (Direct Cost: ¥2,000,000、Indirect Cost: ¥600,000)
Keywords脂肪分化 / スプライシング / 大規模解析 / 網羅的解析 / 生物系薬学
Outline of Final Research Achievements

This study is designed to verify the essential roles of alternative splicing (AS) in the process of adipose differentiation and to establish the concept that RNA splicing is one of the adipose differentiation-modulators.
First, we extracted the genes that seemed their splicing patterns are fluctuating in the process of adipose differentiation, using open access RNA-seq data. Then, we performed a cluster analysis of gene expression patterns, and classifed the gene included in each clusters into its physiological functions. We inspected these “candidates” by RT-PCR, and obtained several genes that vary their splicing pattern during adipose differentiation.

Report

(3 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • Research Products

    (1 results)

All 2017

All Presentation (1 results)

  • [Presentation] スプライシングレポーターを用いたPKMスプライシングスイッチの生理的意義の解明2017

    • Author(s)
      大出寧香,倉はるか,鈴木健二,正木聡
    • Organizer
      フォーラム2017:衛生薬学・環境トキシコロジー
    • Related Report
      2017 Annual Research Report

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Published: 2016-04-21   Modified: 2019-03-29  

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