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Development of novel diagnostic and therapeutic approach for the diffuse large B cell lymphoma with CDKN2A deletion

Research Project

Project/Area Number 16K21284
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Hematology
General medical chemistry
Research InstitutionKyoto Prefectural University of Medicine

Principal Investigator

Chinen Yoshiaki  京都府立医科大学, 医学(系)研究科(研究院), 助教 (10757602)

Project Period (FY) 2016-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2017: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Fiscal Year 2016: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
KeywordsFISH法 / CDKN2A/B欠失 / B細胞性リンパ腫 / 染色体微小領域欠損 / CDKN2A / 難治性B細胞腫瘍
Outline of Final Research Achievements

Chromosomal microdeletions frequently cause the loss of prognostically relevant tumor suppressor genes in B cell lymphomas (BCLs). However, the detection of minute deletions has been mostly impossible by conventional methods due to their low resolution. We developed a novel method designated here as amplified-FISH (AM-FISH), which enables the detection of chromosomal microdeletion shorter than 50 kb in BCLs. In the AM-FISH, the 31 kb Fluorescein isothiocyanate (FITC)-conjugated DNA probe encoding only CDKN2A gene was first hybridized with chromosome, and then, was labeled with Alexa Fluor 488-conjugated anti-FITC secondary antibody to help increase sensitivity. CDKN2A signals were equally identifiable by AM-FISH and conventional FISH, and AM-FISH could detect tumor cells with CDKN2A deletion even in the clinical sample contaminated with normal cells to some extent. AM-FISH is a highly sensitive, specific and easy method for the diagnoses of various types of chromosomal microdeletions.

Academic Significance and Societal Importance of the Research Achievements

本研究によって、B細胞リンパ腫(BCL)の高度悪性化の誘因となるCDKN2A/2B遺伝子欠失症例が、簡便、迅速、安価にスクリーニング可能であることが示され、CDKN2A/2B遺伝子欠損をもつBCL患者群の予後予測や治療層別化など新たな治療戦略の構築に寄与するものと考えられた。また、診断・治療に染色体微小欠失の有無の鑑別が必要となるその他の疾患についても応用可能であり、血液悪性腫瘍以外の領域にも応用可能であることが示唆された。

Report

(4 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • 2016 Research-status Report
  • Research Products

    (13 results)

All 2019 2018 2017 2016

All Journal Article (5 results) (of which Peer Reviewed: 5 results,  Open Access: 3 results,  Acknowledgement Compliant: 1 results) Presentation (8 results) (of which Int'l Joint Research: 2 results)

  • [Journal Article] A novel method of amplified fluorescent in situ hybridization for detection of chromosomal microdeletions in B cell lymphoma.2019

    • Author(s)
      Mizuno Y, Chinen Y, Tsukamoto T, Takimoto-Shimomura T, Matsumura-Kimoto Y, Fujibayashi Y, Kuwahara-Ota S, Fujino T, Nishiyama D, Shimura Y, Kobayashi T, Horiike S, Taniwaki M, Kuroda J.
    • Journal Title

      Int J Hematol.

      Volume: 109 Issue: 5 Pages: 593-602

    • DOI

      10.1007/s12185-019-02617-x

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A novel method of amplified fluorescent in situ hybridization for detection of chromosomal microdeletions in B cell lymphoma2019

    • Author(s)
      Mizuno Y, Chinen Y, Tsukamoto T, Takimoto-Shimomura T, Matsumura-Kimoto Y, Fujibayashi Y, Kuwahara-Ota S, Fujino T, Nishiyama D, Shimura Y, Kobayashi T, Horiike S, Taniwaki M, Kuroda J
    • Journal Title

      International Journal of Hematology

      Volume: -

    • Related Report
      2016 Research-status Report
    • Peer Reviewed
  • [Journal Article] Prognostic impact of a past or synchronous second cancer in diffuse large B cell lymphoma.2018

    • Author(s)
      Tanba K, Chinen Y, Uchiyama H, Uoshima N, Shimura K, Fuchida S, Kiyota M, Nakao M, Shimura Y, Kobayashi T, Horiike S, Wada K, Shimazaki C, Kaneko H, Kobayashi Y, Taniwaki M, Kuroda J.
    • Journal Title

      Blood Cancer J.

      Volume: 8 Issue: 1 Pages: 1-5

    • DOI

      10.1038/s41408-017-0043-6

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Prognostic impact of a past or synchronous second cancer in diffuse large B cell lymphoma2018

    • Author(s)
      Kazuna Tanba, Yoshiaki Chinen, Hitoji Uchiyama, Nobuhiko Uoshima, Kazuho Shimura, Shinichi Fuchida, Miki Kiyota, Mitsushige Nakao, Yuji Shimura, Tsutomu Kobayashi, Shigeo Horiike, Katsuya Wada, Chihiro Shimazaki, Hiroto Kaneko, Yutaka Kobayashi, Masafumi Taniwaki, Junya Kuroda
    • Journal Title

      Blood Cancer Journal

      Volume: 1 Pages: 1-1

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Epigenetic repression of miR-375 is the dominant mechanism for constitutive activation of the PDPK1/RPS6KA3 signalling axis in multiple myeloma.2017

    • Author(s)
      Tatekawa S, Chinen Y, Ri M, Narita T, Shimura Y, Matsumura-Kimoto Y, Tsukamoto T, Kobayashi T, Kawata E, Uoshima N, Taki T, Taniwaki M, Handa H, Iida S, Kuroda J.
    • Journal Title

      British Journal of Haematology

      Volume: 印刷中 Issue: 4 Pages: 534-546

    • DOI

      10.1111/bjh.14707

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] 増幅FISH法によるB細胞リンパ腫のCDKN2A微小欠損の検出2018

    • Author(s)
      水野 芳美, 知念 良顕, 塚本 拓, 下村 とも子, 志村 勇司, 古林 勉, 堀池 重夫, 谷脇 雅史, 黒田 純也
    • Organizer
      第80回日本血液学会学術集会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Cyclin D1 transcript variant in mantle cell lymphoma and myeloma with chromosome 11q13 abnormality2017

    • Author(s)
      Yoshiaki Chinen, Taku Tsukamoto, Yayoi Kimoto, Tomoko Takimoto, Yoshimi Mizuno, Saori Maegata, Saeko Ota, Kazuna Tanba, Yuji Shimura, Tsutomu Kobayashi, Shigeo Horiike, Junya Kuroda
    • Organizer
      第79回日本血液学会総会
    • Related Report
      2017 Research-status Report
  • [Presentation] Prognostic Impact of Past History of Other Malignancies in Diffuse Large B Cell Lymphoma2017

    • Author(s)
      Kazuna Tanba, Yoshiaki Chinen, Hitoji Uchiyama, Nobuhiko Uoshima, Kazuho Shimura, Shin-ichi Fuchida, Miki Kiyota, Mitsushige Nakao, Yuji Shimura, Tsutomu Kobayashi, Shigeo Horiike, Katsuya Wada, Chihiro Shimazaki, Hiroto Kaneko, Yutaka Kobayashi, Masafumi Taniwaki, Junya Kuroda
    • Organizer
      American society of Hematology, 59th Annual Meeting and Exposition
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] The Abnormal Repression of Mir-375 Expression By Overlapping Epigenetic Dysregulations in Myelomas2016

    • Author(s)
      Shotaro Tatekawa, Yoshiaki Chinen, Yuji Shimura, Yayoi Matsumura-Kimoto, Hisao Nagoshi, Tsutomu Kobayashi, Eri Kawata, Tomoko Narita, Masaki Ri, Hiroshi Handa, Nobuhiko Uoshima, Shinsuke Iida, Junya Kuroda
    • Organizer
      American society of Hematology, 58th Annual Meeting and Exposition
    • Place of Presentation
      San Diego (USA)
    • Year and Date
      2016-12-03
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Novel tumor-specific CCND1 isoforms in mantle cell lymphoma and myeloma with 11q23 abnormality2016

    • Author(s)
      Yoshiaki Chinen, Shotaro Tatekawa, Saori Maegawa, Tomoko Takimoto, Hisao Nagoshi, Yuji Shimura, Mio Yamamoto-Sugitani, Tustomu Kobayashi, Shigeo Horiike, Masafumi Taniwaki, Junya Kuroda
    • Organizer
      第78回日本血液学会学術集会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Year and Date
      2016-10-13
    • Related Report
      2016 Research-status Report
  • [Presentation] The epigenetic dysregulation of miR-375 for PDPK1 overexpression/activation in multiple myeloma2016

    • Author(s)
      Shotaro Tatekawa, Yoshiaki Chinen, Yuji Shimura, Yayoi Matsumura-Kimoto, Hisao Nagoshi, Tsutomu Kobayashi, Eri Kawata, Tomoko Narita, Masaki Ri, Hiroshi Handa, Nobuhiko Uoshima, Shinsuke Iida, Junya Kuroda
    • Organizer
      第78回日本血液学会学術集会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Year and Date
      2016-10-13
    • Related Report
      2016 Research-status Report
  • [Presentation] The role of aberrant PDPK1-RSK2 signaling pathway activation in multiple myeloma2016

    • Author(s)
      Yoshiaki Chinen
    • Organizer
      第41回日本骨髄腫学会学術集会
    • Place of Presentation
      あわぎんホール(徳島県徳島市)
    • Year and Date
      2016-05-28
    • Related Report
      2016 Research-status Report
  • [Presentation] The epigenetic dysregulation of miR-375 for PDPK1 overexpression/activation in multiple myeloma2016

    • Author(s)
      Shotaro Tatekawa, Yoshiaki Chinen, Yuji Shimura, Hisao Nagoshi, Tutor Kobayashi, Yayoi Kimoto, Eri Kawata, Tomoko Narita, Masaki Ri, Hiroshi Handa, Nobuhiko Uoshima, Shinsuke Iida, Junya Kuroda
    • Organizer
      第41回日本骨髄腫学会学術集会
    • Place of Presentation
      あわぎんホール(徳島県徳島市)
    • Year and Date
      2016-05-28
    • Related Report
      2016 Research-status Report

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Published: 2016-04-21   Modified: 2020-03-30  

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