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Construction of multi-organ simultaneous parallel gene expression network in Cryptomeria japonica.

Research Project

Project/Area Number 16K21596
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Forest science
Wood science
Research InstitutionForest Research and Management Organization

Principal Investigator

MISHIMA KENTARO  国立研究開発法人森林研究・整備機構, 森林総合研究所林木育種センター, 主任研究員 等 (30438098)

Project Period (FY) 2016-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2017: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2016: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywordsスギ / 遺伝子発現 / マルチオルガン / マイクロアレイ
Outline of Final Research Achievements

In this study, we have sampled multi-organ (apical-shoot, needle-leaf, cambium) from single tree throughout a year, and then constructed a gene expression network using microarray analysis, which can examine the expression levels of several tens of thousands of genes at the same time. In gene expression data, there were gene groups that do not indicate fluctuation regardless of organ or time, on the other hand, two fluctuation gene expression trends were indicated. Firstly, gene expression pattern was divided into two groups as the cambium group and apical-shoot/needle-leaf group. These findings suggest that difference among two groups indicated in functional difference in tissue. Secondly, gene expression pattern in each group was split into the growing season and dormant season.

Report

(3 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • Research Products

    (1 results)

All 2017

All Presentation (1 results)

  • [Presentation] スギの複数器官における遺伝子発現の統合解析2017

    • Author(s)
      三嶋賢太郎、能勢美峰、栗田学、坪村美代子、平尾知士、平岡裕一郎、花岡創、井城泰一、大平峰子、高島有哉、松下通也、高橋誠
    • Organizer
      第6回森林遺伝育種学会
    • Related Report
      2017 Annual Research Report

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Published: 2016-04-21   Modified: 2019-03-29  

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