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Integrative analysis of metagenomics and metabolomics for eosinophilic gastrointestinal disorders in children

Research Project

Project/Area Number 16K21670
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Pediatrics
Collagenous pathology/Allergology
Research InstitutionNational Center for Child Health and Development

Principal Investigator

Shoda Tetsuo  国立研究開発法人国立成育医療研究センター, 生体防御系内科部, 医師研究員 (00724311)

Project Period (FY) 2016-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2017: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Fiscal Year 2016: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Keywords好酸球性消化管疾患 / 腸内細菌叢 / メタボローム / 腸内細菌 / アレルギー・ぜんそく
Outline of Final Research Achievements

Microbes may increase susceptibility to eosinophilic gastrointestinal disorders (EGID) by producing bioactive metabolites that affect immune activity and epithelial function. To uncover disease-associated microbial and metabolomics profile in pediatric EGID by next-generation sequencing analysis, a case-control study (EGID vs control, n=5 vs 10) was conducted. Several analyses, including principal coordinate analysis, cluster analysis and integrated analysis of both microbiome and metabolome, did not show significant differences between EGID and control. In this case-control study, a disease-associated microbial and metabolomics profile in pediatric EGID was not found.

Report

(3 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • Research Products

    (9 results)

All 2017 2016

All Journal Article (9 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 8 results,  Open Access: 3 results,  Acknowledgement Compliant: 1 results)

  • [Journal Article] Serum Biomarkers for the Diagnosis of Eosinophilic Esophagitis and Eosinophilic Gastroenteritis2017

    • Author(s)
      Shunji Ishihara, Tetsuo Shoda, et al.
    • Journal Title

      Internal Medicine

      Volume: 56 Issue: 21 Pages: 2819-2825

    • DOI

      10.2169/internalmedicine.8763-16

    • NAID

      130006191952

    • ISSN
      0918-2918, 1349-7235
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Factors Associated with Development of Food Allergy in Young Children after Liver Transplantation: A Retrospective Analysis of 10 Years' Experience.2017

    • Author(s)
      Mitsui M, Shoda T, Natsume O, Nomura I, Narita M, Fukuda A, Sakamoto S, Kasahara M, Ohya Y.
    • Journal Title

      J Allergy Clin Immunol Pract.

      Volume: 5 Issue: 6 Pages: 1698-1706

    • DOI

      10.1016/j.jaip.2017.04.013

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Gene Expression Patterns in Distinct Endoscopic Findings for Eosinophilic Gastritis in Children.2017

    • Author(s)
      Sato M, Shoda T, Shimizu H, Orihara K, Futamura K, Matsuda A, Yamada Y, Irie R, Yoshioka T, Shimizu T, Ohya Y, Nomura I, Matsumoto K, Arai K.
    • Journal Title

      The Journal of Allergy and Clinical Immunology: In Practice

      Volume: 5 Issue: 6 Pages: 1639-1649

    • DOI

      10.1016/j.jaip.2017.03.030

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Yogurt consumption in infancy is inversely associated with atopic dermatitis and food sensitization at 5 years of age: A hospital-based birth cohort study.2017

    • Author(s)
      Shoda T, Futamura M, Yang L, Narita M, Saito H, Ohya Y.
    • Journal Title

      J Dermatol Sci

      Volume: 86 Issue: 2 Pages: 90-6

    • DOI

      10.1016/j.jdermsci.2017.01.006

    • Related Report
      2017 Annual Research Report 2016 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Eosinophilic esophagitis versus proton pump inhibitor-responsive esophageal eosinophilia: Transcriptome analysis2017

    • Author(s)
      Shoda T, Matsuda A, Nomura I, Okada N, Orihara K, Mikami H, Ishimura N, Ishihara S, Matsumoto K, Kinoshita Y
    • Journal Title

      Journal of Allergy and Clinical Immunology

      Volume: - Issue: 6 Pages: 2010-2013

    • DOI

      10.1016/j.jaci.2016.11.028

    • Related Report
      2017 Annual Research Report 2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Factors Associated with Development of Food Allergy in Young Children after Liver Transplantation: A Retrospective Analysis of 10 Years' Experience2017

    • Author(s)
      Mitsui M, Shoda T, Natsume O, Nomura I, Narita M, Fukuda A, Sakamoto S, Kasahara M, Ohya Y
    • Journal Title

      J Allergy Clin Immunol Pract

      Volume: 印刷中

    • Related Report
      2016 Research-status Report
    • Peer Reviewed
  • [Journal Article] Gene expression patterns in distinct endoscopic findings for eosinophilic gastritis in children2017

    • Author(s)
      Sato M, Shoda T, Shimizu H, Orihara K, Futamura K, Matsuda A, Yamada Y, Yoshioka T, Shimizu T, Ohya Y, Nomura I, Matsumoto K, Arai K
    • Journal Title

      J Allergy Clin Immunol Pract

      Volume: 印刷中

    • Related Report
      2016 Research-status Report
    • Peer Reviewed
  • [Journal Article] Serum biomarkers for diagnosis of eosinophilic esophagitis and eosinophilic gastroenteritis.2017

    • Author(s)
      Ishihara S, Shoda T, Ishimura N, Ohta S, Ono J, Azuma Y, Okimoto E, Izuhara K, Nomura I, Matsumoto K, Kinoshita Y
    • Journal Title

      Intern Med

      Volume: 印刷中

    • NAID

      130006191952

    • Related Report
      2016 Research-status Report
    • Peer Reviewed
  • [Journal Article] 好酸球性食道炎の分子機構-食道での発現蛋白解析データを中心に-2016

    • Author(s)
      正田哲雄
    • Journal Title

      G.I.Research

      Volume: 24 Pages: 175-180

    • Related Report
      2016 Research-status Report

URL: 

Published: 2016-04-21   Modified: 2019-03-29  

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