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Epigenetics analysis of HTLV-1 provirus through international comparison(Fostering Joint International Research)

Research Project

Project/Area Number 16KK0206
Research Category

Fund for the Promotion of Joint International Research (Fostering Joint International Research)

Allocation TypeMulti-year Fund
Research Field Hematology
Research InstitutionKumamoto University

Principal Investigator

Katsuya Hiroo  熊本大学, エイズ学研究センター, 特任助教 (80632041)

Research Collaborator Satou Yorifumi  熊本大学, エイズ学研究センター, 教授
Bangham Charles  インペリアル大学, 医学部免疫学講座, 教授
Project Period (FY) 2016 – 2018
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥14,950,000 (Direct Cost: ¥11,500,000、Indirect Cost: ¥3,450,000)
KeywordsHTLV-1 / 成人T細胞白血病・リンパ腫 / レトロウイルス / 転写制御 / DNA-capture-seq / 成人T細胞白血病-リンパ腫 / HTLV-1関連脊髄症 / 転写 / 成人T細胞白血病 / ウィルス / 遺伝子
Outline of Final Research Achievements

We have developed the use of DNA probes for the capture of HTLV-1 fragments from a library prepared for next-generation sequence to efficiently analyze epigenetic features of the provirus. Using this approach, we found the novel enhancer region near the 3’LTR in HTLV-1. This enhancer region might contribute to keep HBZ expression constant, and thus maintain persistent HTLV-1 infection. DNA-capture-seq, furthermore, revealed that infected clones with defective-type provirus exhibited higher degree of clonal abundance than those with full-length type. This finding indicated that defective proviruses, which could not produce viral antigens, should allow the infected cell to escape from the host immune surveillance, resulting in clonal expansion of the infected cells.

Academic Significance and Societal Importance of the Research Achievements

HTLV-1の新たな転写制御メカニズムを見出した。ウイルス遺伝子であるHBZの恒常的発現の機序の一つである可能性がある。HBZはHTL-1感染細胞の増殖に関わることが知られており、今後のHTLV-1感染細胞の増殖制御に関わる研究につなげることができる。

Report

(4 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • 2016 Research-status Report
  • Research Products

    (28 results)

All 2018 2017 Other

All Int'l Joint Research (1 results) Journal Article (6 results) (of which Int'l Joint Research: 3 results,  Peer Reviewed: 6 results,  Open Access: 5 results,  Acknowledgement Compliant: 2 results) Presentation (20 results) (of which Int'l Joint Research: 5 results) Remarks (1 results)

  • [Int'l Joint Research] インペリアル大学(英国)2017

    • Related Report
      2018 Annual Research Report
  • [Journal Article] Phosphatidylinositol 3-kinase-δ (PI3K-δ) is a potential therapeutic target in adult T-cell leukemia-lymphoma2018

    • Author(s)
      Katsuya Hiroo、Cook Lucy B. M.、Rowan Aileen G.、Satou Yorifumi、Taylor Graham P.、Bangham Charles R. M.
    • Journal Title

      Biomarker Research

      Volume: 6 Issue: 1 Pages: 24-24

    • DOI

      10.1186/s40364-018-0138-7

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Dynamics and mechanisms of clonal expansion of HIV-1-infected cells in a humanized mouse model2017

    • Author(s)
      Satou Yorifumi、Katsuya Hiroo、Fukuda Asami、Misawa Naoko、Ito Jumpei、Uchiyama Yoshikazu、Miyazato Paola、Islam Saiful、Fassati Ariberto、Melamed Anat、Bangham Charles R. M.、Koyanagi Yoshio、Sato Kei
    • Journal Title

      Scientific Reports

      Volume: 7(1) Issue: 1 Pages: 6913-6913

    • DOI

      10.1038/s41598-017-07307-4

    • NAID

      120006364095

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Treatment advances and prognosis for patients with adult T-cell leukemia-lymphoma2017

    • Author(s)
      Katsuya Hiroo、Ishitsuka Kenji
    • Journal Title

      Journal of Clinical and Experimental Hematopathology

      Volume: 57 Issue: 3 Pages: 87-97

    • DOI

      10.3960/jslrt.17008

    • NAID

      130006286271

    • ISSN
      1346-4280, 1880-9952
    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Prognostic index for chronic- and smoldering-type adult T-cell leukemia-lymphoma2017

    • Author(s)
      Katsuya Hiroo、Shimokawa Mototsugu、Ishitsuka Kenji、Kawai Kazuhiro、Amano Masahiro、Utsunomiya Atae、Hino Ryosuke、Hanada Shuichi、Jo Tatsuro、Tsukasaki Kunihiro、Moriuchi Yukiyoshi、Sueoka Eisaburo、Yoshida Shinichiro、Suzushima Hitoshi、Miyahara Masaharu、Yamashita Kiyoshi、Eto Tetsuya、Suzumiya Junji、Tamura Kazuo
    • Journal Title

      Blood

      Volume: 130 Issue: 1 Pages: 39-47

    • DOI

      10.1182/blood-2017-01-757542

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] A prognostic index for chronic- and smoldering-type adult T-cell leukemia-lymphoma2017

    • Author(s)
      Katsuya H, Shimokawa M, Ishitsuka K, Kawai K, Amano M, Utsunomiya A, Hino R, Hanada S, Jo T, Tsukasaki K, Moriuchi Y, Sueoka E, Yoshida S, Suzushima H, Miyahara M, Yamashita K, Eto T, Suzumiya J, Tamura K.
    • Journal Title

      Blood

      Volume: -

    • NAID

      40021603060

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Treatment advances and prognosis for patients with adult T-cell leukemia-lymphoma2017

    • Author(s)
      Katsuya H, Ishitsuka K
    • Journal Title

      Journal of Clinical and Experimental Hematopathology

      Volume: -

    • NAID

      130006286271

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] The nature of HTLV-1 provirus in infected individuals analyzed by HTLV-1 DNA capture sequencing2018

    • Author(s)
      勝屋弘雄、イスラム サイフル、宮里パオラ、タンベンジー・ジェック・ヤング、岩瀬早織、松尾美沙希、佐藤知雄、野坂生郷、徳永雅仁、宇都宮與、山岸誠、内丸薫、渡邉俊樹、山野嘉久、佐藤賢文
    • Organizer
      第5回日本HTLV-1学会学術集会
    • Related Report
      2018 Annual Research Report
  • [Presentation] HTLV-1内に存在する新規エンハンサー領域の分子メカニズム解析2018

    • Author(s)
      松尾美沙希、上野孝治、宮里パオラ、勝屋弘雄、徳永雅仁、野坂生郷、宇都宮與)、藤澤順一、佐藤賢文
    • Organizer
      第5回日本HTLV-1学会学術集会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Molecular Characterization of a New HTLV-1 Enhancer2018

    • Author(s)
      松尾美沙希、上野孝治、宮里パオラ、勝屋弘雄、徳永雅仁、野坂生郷、宇都宮與)、藤澤順一、佐藤賢文
    • Organizer
      第66回日本ウイルス学会学術集会
    • Related Report
      2018 Annual Research Report
  • [Presentation] HTLV-1-infected Asymptomatic Carriers versus ATL PBMCs: A Single-Cell Transcriptional Profiling Approach2018

    • Author(s)
      Benjy Tan Jek Yang, Katsuya Hiroo, Miyazato Paola, Uchiyama Yoshikazu, Sakurai Yasushi, Satou Yorifumi
    • Organizer
      第66回日本ウイルス学会学術集会
    • Related Report
      2018 Annual Research Report
  • [Presentation] HTLV-1 RNAの転写後調整におけるZC3HAV1タンパク質の役割2018

    • Author(s)
      Paola Miyazato, Benjy Tan Jek Yang, Michiyo Tokunaga, Hiroo Katsuya, Misaki Matsuo, Junpei Ito, Yasuhiro Murakawa, Yorifumi Satou
    • Organizer
      第41回日本分子生物学会年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Targeted Enrichment: A Novel Approach to Analyze the Integrated HTLV-1 Provirus through Next-Generation Sequencing2017

    • Author(s)
      Paola Miyazato, Hiroo Katsuya, Asami Fukuda, Yoshikazu Uchiyama, Misaki Matsuo, Michiyo Tokunaga, Shinjiro Hino, Mitsuyoshi Nakao, Yorifumi Satou
    • Organizer
      第 18回国際ヒトレトロウイルス HTLV会議
    • Place of Presentation
      ホテルグランドアーク半蔵門 (東京都千代田区)
    • Year and Date
      2017-03-07
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Possible Involvement of YB-1 in the Abnormal Nuclear Shape of Adult T-cell Leukemia/ Lymphoma Cells2017

    • Author(s)
      Hiroo Katsuya, Misaki Kakoki, Takafumi Noguchi, Yuki Inada, Paola Miyazato, Misaki Matsuo, Hiroyuki Hata, Tokio Tani, Yorifumi Satou
    • Organizer
      第 18回国際ヒトレトロウイルス HTLV会議
    • Place of Presentation
      ホテルグランドアーク半蔵門 (東京都千代田区)
    • Year and Date
      2017-03-07
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Phosphatidylinositol 3-kinase-δ (PI3k-δ) is a potential therapeutic target in adult T-cell leukemia-lymphoma2017

    • Author(s)
      Hiroo Katsuya, Lucy B. M. Cook, Aileen G. Rowan, Graham P. Taylor, Charles R. M. Bangham
    • Organizer
      第 18回国際ヒトレトロウイルス HTLV会議
    • Place of Presentation
      ホテルグランドアーク半蔵門 (東京都千代田区)
    • Year and Date
      2017-03-07
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Highly sensitive viral RNA-seq is a powerful tool to analyze the viral transcripts in HTLV-1-infected individuals2017

    • Author(s)
      Yuki Inada, Hiroo Katsuya, Paola Miyazato, Benjy Tan Jek Yang, Saori Iwase, Misaki Kakoki, Misaki Matsuo, Islam Mohammad Saiful, Masahito Tokunaga, Hiroyuki Hata, Yoshihisa Yamano, Atae Utsunomiya, Yorifumi Satou
    • Organizer
      The 59th American Society of Hematology
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] Possible Involvement of YB-1 in Abnormal Nuclear Shape of Adult T-Cell Leukemia/Lymphoma Cell2017

    • Author(s)
      Misaki Kakoki, Hiroo Katsuya, Paola Miyazato, Takafumi Noguchi, Yuki Inada, Misaki Matsuo, Hiroyuki Hata, Tokio Tani and Yorifumi Satou
    • Organizer
      The 59th American Society of Hematology
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] 次世代シークエンスによるヒト化マウスHIV-1感染モデルにおけるウイルス感染細胞クローン動態解析2017

    • Author(s)
      佐藤賢文、勝屋弘雄、福田麻美、三沢尚子、伊東潤平、内山良一、宮里パオラ、Mohammad S Islam、Ariberto Fassati、Charles RM Bangham、小柳義夫、佐藤圭
    • Organizer
      第27回抗ウイルス療法学会学術集会
    • Related Report
      2017 Research-status Report
  • [Presentation] Integral transcriptomic and epigenetic analyses of HTLV-1 proviruses in infected cell2017

    • Author(s)
      宮里パオラ、タン ベンジー ジェック ヤン、徳永美知代、松尾美沙希、勝屋弘雄、稲田優紀、佐藤賢文
    • Organizer
      第4回日本HTLV-1学会学術集会
    • Related Report
      2017 Research-status Report
  • [Presentation] Phosphatidylinositol 3-kinase-δ (PI3k-δ) is a potential therapeutic target in adult T-cell leukemia-lymphoma2017

    • Author(s)
      Hiroo Katsuya, Lucy B. M. Cook, Aileen G. Rowan, Yorifumi Satou, Graham P. Taylor and Charles R. M. Bangham
    • Organizer
      第4回日本HTLV-1学会学術集会
    • Related Report
      2017 Research-status Report
  • [Presentation] HTLV-1新規エンハンサーの分子メカニズムおよび組み込み部位周辺宿主ゲノムとの機能的相互作用解析2017

    • Author(s)
      松尾美沙希、宮里パオラ、勝屋弘雄、稲田優紀、徳永雅仁、宇都宮與、野坂生郷、畑裕之、佐藤賢文
    • Organizer
      第4回日本HTLV-1学会学術集会
    • Related Report
      2017 Research-status Report
  • [Presentation] Possible involvement of YB-1 in abnormal nuclear shape of adult T-cell leukemia-Iymphoma cells2017

    • Author(s)
      Misaki Kakoki, Hiroo Katsuya, Takafumi Noguchi, Yuki Inada, Paola Miyazato, Misaki Matsuo, Benjy Tan Jek Yang, Islam Mohammad Saiful, Hiroyuki Hata, Tokio Tani, Yorifumi Satou
    • Organizer
      第4回日本HTLV-1学会学術集会
    • Related Report
      2017 Research-status Report
  • [Presentation] 治療後成人T細胞性白血病/リンパ腫患者におけるligation-mediated PCRと次世代シークエンスを用いた微小残存病変の検出2017

    • Author(s)
      勝屋弘雄
    • Organizer
      第79回日本血液学会学術集会
    • Related Report
      2017 Research-status Report
  • [Presentation] Possible involvement of YB-1 in abnormal nuclear shape of adult T-cell leukemia-Iymphoma cells2017

    • Author(s)
      Misaki Kakoki, Hiroo Katsuya, Takafumi Noguchi, Yuki Inada, Paola Miyazato, Misaki Matsuo, Masahito Tokunaga, Atae Utsunomiya, Hiroyuki Hata, Tokio Tani, Yorifumi Satou
    • Organizer
      第79回日本血液学会学術集会
    • Related Report
      2017 Research-status Report
  • [Presentation] Identification and molecular characterization of a new HTLV-1 enhancer2017

    • Author(s)
      松尾 美沙希、宮里 パオラ 、勝屋弘雄、稲田優紀、徳永 雅仁、宇都宮 與、野坂 生郷 、畑裕之、佐藤 賢文
    • Organizer
      第65回日本ウイルス学会学術集会
    • Related Report
      2017 Research-status Report
  • [Presentation] Highly sensitive viral RNA-seq is a powerful tool to analyze the viral transcripts in HTLV-1 infected individual2017

    • Author(s)
      稲田 優紀、勝屋 弘雄、宮里 パオラ、Benjy Tan Jek Yong、岩瀬 早織、鹿子木 実咲、松尾 美沙希、Islam Mohammad Saiful、徳永 まさとし、佐藤 知雄、畑 裕之、山野 嘉久、宇都宮 與、佐藤 賢文
    • Organizer
      第65回日本ウイルス学会
    • Related Report
      2017 Research-status Report
  • [Presentation] 転写調節メカニズムの解明へ向けたHTLV-1感染細胞のプロウイルストランスクリプトーム解析(Transcriptomic analysis of HTLV-1 proviruses in infected cells: hints to elucidate the mechanisms of transcriptional regulation)2017

    • Author(s)
      宮里パオラ、タン ベンジー ジェック ヤン、徳永美知代、勝屋弘雄、松尾美沙希、稲田優紀、伊東潤平、佐藤賢文
    • Organizer
      第40回日本分子生物学会年会
    • Related Report
      2017 Research-status Report
  • [Remarks] 熊本大学エイズ学研究センター 佐藤研究室WEBサイト

    • URL

      http://www.caids.kumamoto-u.ac.jp/satou/index.html

    • Related Report
      2018 Annual Research Report

URL: 

Published: 2017-03-15   Modified: 2020-03-30  

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