• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Elucidation of Molecular Mechanism Responsible for Peroxidase Activity of a Heme-Nucleic Acid Complex through the Nature of an Axial H2O ligand and Its Application to Design of Novel Catalysts

Research Project

Project/Area Number 16KT0048
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeMulti-year Fund
Section特設分野
Research Field Transition State Control
Research InstitutionUniversity of Tsukuba

Principal Investigator

Yamamoto Yasuhiko  筑波大学, 数理物質系, 教授 (00191453)

Project Period (FY) 2016-07-19 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥18,460,000 (Direct Cost: ¥14,200,000、Indirect Cost: ¥4,260,000)
Fiscal Year 2019: ¥2,860,000 (Direct Cost: ¥2,200,000、Indirect Cost: ¥660,000)
Fiscal Year 2018: ¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2017: ¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2016: ¥7,540,000 (Direct Cost: ¥5,800,000、Indirect Cost: ¥1,740,000)
Keywords四重鎖DNA / ヘム / G-カルテット / 酸化触媒作用 / テロメア / 機能性核酸 / 触媒機構 / 軸配位子 / 水分子
Outline of Final Research Achievements

The molecular mechanism of the peroxidase activity of a complex composed of a G-quadruplex DNA formed from guanine-rich DNA and heme, found as prosthetic groups of various hemoproteins abundant in nature, has been elucidated. A water molecule (H2O) is located at the interface between the heme and DNA in the complex and is coordinated to the heme Fe atom. We found that the axial H2O in the complex is capable of being an electron-donating ligand which increases the Lewis basicity of the heme Fe atom to facilitate heterolytic O-O bond cleavage of Fe-bound peroxide (H2O2) to promote the formation of a high-valent iron(IV)oxo porphyrin π-cation radical.

Academic Significance and Societal Importance of the Research Achievements

ヘム核酸複合体の酸化触媒作用の遷移状態が軸配位子H2Oの電子的性質により調節される機構の解明を通して、H2Oの新しい機能が発見された。当該H2Oは、電子的性質が特異であるだけでなく、ヘム核酸複合体のヘムと四重鎖DNAの接触界面で孤立しているため、その運動性も特異である。これらの知見は、H2Oを利用する新しい反応の発見に役立つことが期待される。また、ヘムが核酸の補欠分子族として機能することから、ヘムタンパク質の機能を変えずにタンパク質部分を核酸で置換することが可能であることが示された。

Report

(5 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Research-status Report
  • 2017 Research-status Report
  • 2016 Research-status Report
  • Research Products

    (85 results)

All 2020 2019 2018 2017 2016 Other

All Int'l Joint Research (2 results) Journal Article (15 results) (of which Peer Reviewed: 15 results,  Open Access: 3 results,  Acknowledgement Compliant: 2 results) Presentation (65 results) (of which Int'l Joint Research: 15 results,  Invited: 6 results) Book (1 results) Remarks (2 results)

  • [Int'l Joint Research] Simon Fraser University(カナダ)

    • Related Report
      2018 Research-status Report
  • [Int'l Joint Research] Simon Fraser Univsrsity(Canada)

    • Related Report
      2017 Research-status Report
  • [Journal Article] Characterization of Structure and Catalytic Activity of a Complex between Heme and an All Parallel-Stranded Tetrameric G-Quadruplex Formed from DNA/RNA Chimera Sequence d(TTA)r(GGG)dT2020

    • Author(s)
      Hayasaka Kosuke、Shibata Tomokazu、Sugahara Aya、Momotake Atsuya、Matsui Toru、Neya Saburo、Ishizuka Takumi、Xu Yan、Yamamoto Yasuhiko
    • Journal Title

      Bulletin of the Chemical Society of Japan

      Volume: 93 Issue: 5 Pages: 621-629

    • DOI

      10.1246/bcsj.20200013

    • NAID

      130007842975

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Specific Binding of an Anionic Phthalocyanine Derivative to G-Quadruplex DNAs2020

    • Author(s)
      Uchiyama Mami、Momotake Atsuya、Kobayashi Nagao、Yamamoto Yasuhiko
    • Journal Title

      Chemistry Letters

      Volume: 49 Issue: 5 Pages: 530-533

    • DOI

      10.1246/cl.200110

    • NAID

      130007840180

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Multimodal Multiphoton Imaging of the Lipid Bilayer by Dye-Based Sum-Frequency Generation and Coherent Anti-Stokes Raman Scattering2020

    • Author(s)
      Mizuguchi Takaha、Momotake Atsuya、Hishida Mafumi、Yasui Masato、Yamamoto Yasuhiko、Saiki Toshiharu、Nuriya Mutsuo
    • Journal Title

      Analytical Chemistry

      Volume: 92 Issue: 8 Pages: 5656-5660

    • DOI

      10.1021/acs.analchem.0c00673

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Monitoring the morphological evolution of giant vesicles by azo dye-based sum-frequency generation (SFG) microscopy2020

    • Author(s)
      Momotake Atsuya、Mizuguchi Takaha、Hishida Mafumi、Yamamoto Yasuhiko、Yasui Masato、Nuriya Mutsuo
    • Journal Title

      Colloids and Surfaces B: Biointerfaces

      Volume: 186 Pages: 110716-110716

    • DOI

      10.1016/j.colsurfb.2019.110716

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Identification of Intermediates in Peroxidase Catalytic Cycle of a DNAzyme Possessing Heme2019

    • Author(s)
      Shinomiya Ryosuke、Araki Haruka、Momotake Atsuya、Kotani Hiroaki、Kojima Takahiko、Yamamoto Yasuhiko
    • Journal Title

      Bulletin of the Chemical Society of Japan

      Volume: 92 Issue: 10 Pages: 1729-1736

    • DOI

      10.1246/bcsj.20190157

    • NAID

      130007728639

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Structures and Catalytic Activities of Complexes between Heme and All Parallel-Stranded Monomeric G-Quadruplex DNAs2018

    • Author(s)
      Yamamoto Yasuhiko、Araki Haruka、Shinomiya Ryosuke、Hayasaka Kosuke、Nakayama Yusaku、Ochi Kentaro、Shibata Tomokazu、Momotake Atsuya、Ohyama Takako、Hagihara Masaki、Hemmi Hikaru
    • Journal Title

      Biochemistry

      Volume: 57 Issue: 41 Pages: 5938-5948

    • DOI

      10.1021/acs.biochem.8b00792

    • Related Report
      2018 Research-status Report
    • Peer Reviewed
  • [Journal Article] Characterization of Catalytic Activities and Heme Coordination Structures of Heme?DNA Complexes Composed of Some Chemically Modified Hemes and an All Parallel-Stranded Tetrameric G-Quadruplex DNA Formed from d(TTAGGG)2018

    • Author(s)
      Shinomiya Ryosuke、Katahira Yuya、Araki Haruka、Shibata Tomokazu、Momotake Atsuya、Yanagisawa Sachiko、Ogura Takashi、Suzuki Akihiro、Neya Saburo、Yamamoto Yasuhiko
    • Journal Title

      Biochemistry

      Volume: 57 Issue: 41 Pages: 5930-5937

    • DOI

      10.1021/acs.biochem.8b00793

    • Related Report
      2018 Research-status Report
    • Peer Reviewed
  • [Journal Article] An Intramolecular Antiparallel G-quadruplex Formed by Human Telomere RNA2018

    • Author(s)
      Chao-Da Xiao, Tomokazu Shibata, Yasuhiko Yamamoto, and Yan Xu
    • Journal Title

      Chemical Communications

      Volume: 54 Issue: 32 Pages: 3944-3946

    • DOI

      10.1039/c8cc01427b

    • Related Report
      2018 Research-status Report 2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] Synergistic Effect of Distal Polar Interactions in Myoglobin and Their Structural Consequences2018

    • Author(s)
      Watanabe Miho、Kanai Yuki、Nakamura Shunpei、Nishimura Ryu、Shibata Tomokazu、Momotake Atsuya、Yanagisawa Sachiko、Ogura Takashi、Matsuo Takashi、Hirota Shun、Neya Saburo、Suzuki Akihiro、Yamamoto Yasuhiko
    • Journal Title

      Inorganic Chemistry

      Volume: 57 Issue: 22 Pages: 14269-14279

    • DOI

      10.1021/acs.inorgchem.8b02302

    • Related Report
      2018 Research-status Report
    • Peer Reviewed
  • [Journal Article] A Nuclear Resonance Vibrational Spectroscopic Study of Oxy Myoglobins Reconstituted with Chemically Modified Heme Cofactors: Insights into the Fe?O2 Bonding and Internal Dynamics of the Protein2018

    • Author(s)
      Ohta Takehiro、Shibata Tomokazu、Kobayashi Yasuhiro、Yoda Yoshitaka、Ogura Takashi、Neya Saburo、Suzuki Akihiro、Seto Makoto、Yamamoto Yasuhiko
    • Journal Title

      Biochemistry

      Volume: 57 Issue: 48 Pages: 6649-6652

    • DOI

      10.1021/acs.biochem.8b00829

    • Related Report
      2018 Research-status Report
    • Peer Reviewed
  • [Journal Article] NMR of Paramagnetic Compounds2018

    • Author(s)
      Yasuhiko Yamamoto and Tomokazu Shibata
    • Journal Title

      Experimental Approaches of NMR Spectroscopy, Methodology and Application to Life Science and Materials Science

      Pages: 491-518

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] Characterization of Heme Orientational Disorder in a Myoglobin Reconstituted with a Trifluoromethyl-Group-Substituted Heme Cofactor2017

    • Author(s)
      1.Yuki Kanai, Ayaka Harada, Tomokazu Shibata, Ryu Nishimura, Kosuke Namiki, Miho Watanabe, Shunpei Nakamura, Fumiaki Yuymoto, Toshiya Senda, Akihiro Suzuki, Saburo Neya, and Yasuhiko Yamamoto
    • Journal Title

      Biochemistry

      Volume: 56 Issue: 34 Pages: 4500-4508

    • DOI

      10.1021/acs.biochem.7b00457

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] Effects of Heme Electronic Structure and Distal Polar Interaction on Functional and Vibrational Properties of Myoglobin2016

    • Author(s)
      Y. Kanai, R. Nishimura, K. Nishiyama, T. Shibata, S. Yanagisawa, T. Ogura, T. Matsuo, S. Hirota, S. Neya, A. Suzuki, Y. Yamamoto
    • Journal Title

      Inorg. Chem.

      Volume: 55 Issue: 4 Pages: 1613-1622

    • DOI

      10.1021/acs.inorgchem.5b02520

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Ferrous Heme Iron in Deoxy Myoglobin Reconstitutedwith Trifluoromethyl Group-Substituted Heme Cofactors2016

    • Author(s)
      T. Shibata, Y. Kanai, R. Nishimura, L. Xu, Y. Moritaka, A. Suzuki, S. Neya, M. Nakamura, and Y. Yamamoto
    • Journal Title

      Inorganic Chemistry

      Volume: 55 Issue: 23 Pages: 12128-12136

    • DOI

      10.1021/acs.inorgchem.6b01360

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Characterization of the interaction between heme and a parallel G-quadruplexDNA formed from d(TTGAGG)2016

    • Author(s)
      T. Shibata, Y. Nakayama, Y. Katahira, H. Tai, Y.Moritaka, Y. Nakano, and Y. Yamamoto
    • Journal Title

      Biochim. Biophys. Acta

      Volume: - Issue: 5 Pages: 1264-1270

    • DOI

      10.1016/j.bbagen.2016.11.005

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] メソ位にトリフルオロメチル基を導入したヘムをもつミオグロビンの研究2020

    • Author(s)
      村田莉恵、百武篤也、山本泰彦、鈴木秋弘、松尾貴史、廣田俊、根矢三郎
    • Organizer
      日本化学会第100春季年会 (2020)
    • Related Report
      2019 Annual Research Report
  • [Presentation] 四重鎖DNAとフタロシアニン誘導体の複合体2020

    • Author(s)
      内山真見、柴田友和、百武篤也、池上崇久、松井亨、山本泰彦
    • Organizer
      日本化学会第100春季年会 (2020)
    • Related Report
      2019 Annual Research Report
  • [Presentation] カチオン性共重合体によるヘム-DNA 複合体のペルオキシダーゼ活性の増大2020

    • Author(s)
      荒木はるか、百武篤也、山本泰彦、落合拓郎、嶋田直彦、丸山厚
    • Organizer
      日本化学会第100春季年会 (2020)
    • Related Report
      2019 Annual Research Report
  • [Presentation] ヒトテロメア関連塩基配列のDNA が2 分子で形成する平行型四重鎖DNA およびそのヘムとの複合体の研究2020

    • Author(s)
      岡本千奈、篠宮僚介、山田果央、百武篤也、山本泰彦
    • Organizer
      日本化学会第100春季年会 (2020)
    • Related Report
      2019 Annual Research Report
  • [Presentation] ヘム-DNA 複合体のペルオキシダーゼ活性におけるPush 効果とPull 効果の相関関係の解析2020

    • Author(s)
      萩原翔太、篠宮僚介、百武篤也、鈴木秋弘、根矢三郎、山本泰彦
    • Organizer
      日本化学会第100春季年会 (2020)
    • Related Report
      2019 Annual Research Report
  • [Presentation] ヘム-DNA 複合体のイミダゾール付加物の解析2020

    • Author(s)
      中島優輔、百武篤也、山本泰彦
    • Organizer
      日本化学会第100春季年会 (2020)
    • Related Report
      2019 Annual Research Report
  • [Presentation] Deoxyribozyme Possessing Heme2019

    • Author(s)
      Y. Yamamoto, H. Araki, K. Hayasaka, S. Nakamura,T. Shibata, A. Momotake, and H. Hemmi
    • Organizer
      61st Experimental Nuclear Magnetic Resonance Conference
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Structures and Catalytic Activities of DNA Complexes Consisting of Chemically Modified Heme and Tetrameric G-Quadruplex DNA2019

    • Author(s)
      R. Shinomiya, A. Momotake, Y. Katahira, H. Araki, T. Shibata, S. Yanagisawa, T. Ogura, A. Suzuki, S. Neya, and Y. Yamamoto
    • Organizer
      15th International Symposium on Applied Bioinorganic Chemistry (ISABC15)
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Heme-DNAzyme2019

    • Author(s)
      Y. Yamamoto, R. Shinomiya, H. Araki, T. Shibata, A. Momotake, S. Yanagisawa, T. Ogura, A. Suzuki, S. Neya, and H. Hemmi
    • Organizer
      Commemorative International Symposium of the Japan Society of Nucleic Acids Chemistry
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Heme Meets DNA.2019

    • Author(s)
      Y. Yamamoto, R. Shinomiya, H. Kotani, H. Araki, A. Momotake, T. Shibata, S. Yanagisawa, T. Ogura, H. Hemmi, A. Suzuki, S. Neya, and T. Kojima
    • Organizer
      19th International Conference on Biological Inorganic Chemistry (ICBIC-19)
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] DNAzyme Possessing Heme2019

    • Author(s)
      Y. Yamamoto, R. Shinomiya, H. Araki, T. Shibata, A. Momotake, S. Yanagisawa, T. Ogura, A. Suzuki, and S. Neya
    • Organizer
      The 46th International Symposium on Nucleic Acids Chemistry
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Enhancement of Peroxidase Activity of Heme-DNAzyme through Interaction with Cationic Copolymers2019

    • Author(s)
      H. Araki, A. Momotake, Y. Yamamoto, T. Ochiai, N. Shimada, and A. Maruyama
    • Organizer
      The 46th International Symposium on Nucleic Acids Chemistry
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Complexes between G-quadruplex DNA and Phthalocyanines2019

    • Author(s)
      M. Uchiyama, T. Shibata, A. Momotake, T. Ikeue, and Y. Yamamoto
    • Organizer
      The 46th International Symposium on Nucleic Acids Chemistry
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Electronic Control of Myoglobin Function2019

    • Author(s)
      T. Sugita, T. Matsuo, S. Hirota, S. Yanagisawa, T. Ogura, O. Shoji, Y. Watanabe, A. Suzuki, S. Neya, A. Momotake, and Y. Yamamoto
    • Organizer
      17th International Symposium on Blood Substitutes & Oxygen Therapeutics (XVII-ISBS-2019)
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] ヘムをもつ DNA 酵素2019

    • Author(s)
      山本泰彦、 篠宮僚介、小谷弘明、 荒木はるか、柴田友和、 百武篤也、 柳澤幸子、小倉尚志、逸見光、鈴木秋弘、根矢三郎、小島隆彦
    • Organizer
      第46回生体分子科学討論会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 非線形光学イメージングに向けた無蛍光性分子プローブの開発と応用2019

    • Author(s)
      百武篤也、水口高翔、塗谷睦生、安井正人、山本泰彦
    • Organizer
      第46回生体分子科学討論会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 四重鎖 DNA の形成様式がヘムをもつ DNA 酵素の性質に与える影響2019

    • Author(s)
      荒川和基、山田果央、片平裕弥、越智健太郎、中山優作、荒木はるか、篠宮僚介、百武篤也、山本泰彦
    • Organizer
      第46回生体分子科学討論会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 3'末端に I-カルテットをもつ四重鎖 DNA とヘムの複合体の研究2019

    • Author(s)
      菅原綾、篠宮僚介、木下真志、柴田友和、百武篤也、山本泰彦、 柳澤幸子、小倉尚志、鈴木秋弘、根矢三郎
    • Organizer
      第46回生体分子科学討論会
    • Related Report
      2019 Annual Research Report
  • [Presentation] ヘム鉄の軸配位子としてイミダゾールをもつミオグロビンの研究2019

    • Author(s)
      杉田達郎、百武篤也、山本泰彦、松尾貴史、廣田俊、鈴木秋弘、根矢三郎、荘司長三、渡辺芳人
    • Organizer
      第46回生体分子科学討論会
    • Related Report
      2019 Annual Research Report
  • [Presentation] ヘムをもつDNA 酵素の酸化触媒機構2019

    • Author(s)
      山本泰彦、篠宮僚介、小谷弘明、荒木はるか、柴田友和、百武篤也、柳澤幸子、小倉尚志、鈴木秋弘、根矢三郎、小島隆彦
    • Organizer
      第13回バイオ関連化学シンポジウム2019
    • Related Report
      2019 Annual Research Report
  • [Presentation] Structural characterization of deoxyribozyme possessing heme2019

    • Author(s)
      Y. Yamamoto, Y. Suzuki, Y. Nakajima, T. Shibata, A. Momotake, S. Neya, and A. Suzuki
    • Organizer
      第58回NMR討論会(2019)
    • Related Report
      2019 Annual Research Report
  • [Presentation] 四重鎖DNAとヘムの複合体の酸化触媒機構2019

    • Author(s)
      菅原綾、篠宮僚介、小谷弘明、荒木はるか、柴田友和、百武篤也、柳澤幸子、小倉尚志、鈴木秋弘、根矢三郎、小島隆彦、山本泰彦
    • Organizer
      第52回酸化反応討論会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 四重鎖DNAの形成様式がヘムをもつDNA酵素の性質に与える影響2019

    • Author(s)
      山田果央、荒川和基、篠宮僚介、荒木はるか、柴田友和、百武篤也、山本泰彦
    • Organizer
      日本化学会 第99春季年会 (2019)
    • Related Report
      2018 Research-status Report
  • [Presentation] ヘムをもつDNA酵素のヘム鉄に軸配位子として結合する水分子の性質2019

    • Author(s)
      山本泰彦、篠宮僚介、荒木はるか、柴田友和、百武篤也、柳澤幸子、小倉尚志、鈴木秋弘、根矢三郎、逸見光
    • Organizer
      日本化学会 第99春季年会 (2019)
    • Related Report
      2018 Research-status Report
  • [Presentation] ヘムをもつDNA酵素におけるペルオキシダーゼ活性発現機構の解明2019

    • Author(s)
      篠宮僚介、百武篤也、柳澤幸子、鈴木秋弘、根矢三郎、小谷弘明、小島隆彦、Sen Dipankar、山本泰彦
    • Organizer
      日本化学会 第99春季年会 (2019)
    • Related Report
      2018 Research-status Report
  • [Presentation] Redox-catalyzing Deoxyribozymes Composed of Heme and DNAs2018

    • Author(s)
      Y. Yamamoto, H. Araki, R. Shinomiya, K. Hayasaka, T. Shibata, A. Momotake, S. Yanagisawa, T. Ogura, H. Hemmi, A. Suzuki, and S. Neya
    • Organizer
      9th Asian Biological Inorganic Chemistry Conference (AsBiC9)
    • Related Report
      2018 Research-status Report
  • [Presentation] Deoxyribozymes Composed of Heme and G-quadruplex DNAs2018

    • Author(s)
      Y. Yamamoto, H. Araki, M. Uchiyama, K. Hayasaka, R. Shinomiya, T. Shibata, A. Momotake, M. Hagihara, and H. Hemmi
    • Organizer
      Advances in Noncanonical Nucleic Acids 2018 (ANNA2018)
    • Related Report
      2018 Research-status Report
  • [Presentation] ヒトテロメア類似塩基配列の四重鎖DNAとヘムとの複合体の構造と機能の解析2018

    • Author(s)
      荒木はるか、篠宮僚介、柴田友和、逸見光、萩原正規、小倉尚志、柳澤幸子、鈴木秋弘、根矢三郎、Sen Dipankar、山本泰彦
    • Organizer
      第12回バイオ関連化学シンポジウム2018
    • Related Report
      2018 Research-status Report
  • [Presentation] Structure-function investigation of deoxyribozymes composed of heme and G-quadruplex DNAs2018

    • Author(s)
      Y. Yamamoto, H. Araki, K. Hayasaka, R. Shinomiya, Y. Nakayama, K. Ochi, T. Shibata, A. Momotake, M. Hagihara, D. Sen, and H. Hemmi
    • Organizer
      第57回NMR討論会(2018)
    • Related Report
      2018 Research-status Report
  • [Presentation] キメラ塩基配列d(TTA)r(GGG)d(T)の四重鎖とヘムの複合体2018

    • Author(s)
      早坂 公佑、柴田 友和、松井 亨、山本 泰彦、逸見 光、石塚 匠、徐 岩
    • Organizer
      第20回 RNA学会年会 (RNA2018 OSAKA)
    • Related Report
      2018 Research-status Report
  • [Presentation] ヘムの化学修飾がミオグロビンの酸化還元電位に与える影響2018

    • Author(s)
      中村 朝香、中村 俊平、柴田 友和、山本 泰彦、鈴木 秋弘、根矢 三郎、三重 安弘
    • Organizer
      第45回生体分子科学討論会
    • Related Report
      2018 Research-status Report
  • [Presentation] Characterization of Peroxidase Activities and Structures of Complexes between Chemically Modified Hemes and G-quadruplex DNA Formed from d(TTAGGG)2018

    • Author(s)
      R. Shinomiya, T. Shibata, S. Yanagisawa, T. Ogura, S. Neya, A. Suzuki, and Y. Yamamoto
    • Organizer
      43rd International Conference on Coordination Chemistry (ICCC2018)
    • Related Report
      2018 Research-status Report
  • [Presentation] Characterization of Catalytic Activities and Heme Coordination Structures of Heme-DNA complexes Composed of Chemically-modified Hemes and an All Parallel G-quadruplex DNA [d(TTAGGG)]42018

    • Author(s)
      R. Shinomiya, T. Shibata, S. Yanagisawa, T. Ogura, S. Neya, A. Suzuki, and Y. Yamamoto
    • Organizer
      Tsukuba Global Science Week 2018 (TGSW2018)
    • Related Report
      2018 Research-status Report
  • [Presentation] Characterization of G-quadruplex formed from Chimeric Sequence d(TTA)r(GGG)d(T) and its Complex with Heme2018

    • Author(s)
      K. Hayasaka, T. Shibata, T. Matsui, Y. Yamamoto, H. Hemmi, T. Ishizuka, and Y. Xu
    • Organizer
      Tsukuba Global Science Week 2018 (TGSW2018)
    • Related Report
      2018 Research-status Report
  • [Presentation] Structural Characterization of G-Quadruplex DNAs Formed from Human Telomere-Related Sequences and Their Complexes with Heme2017

    • Author(s)
      Y. Yamamoto, K. Ochi, T. Shibata, H. Hemmi, and M. Hagihara
    • Organizer
      58th Experimental Nuclear Magnetic Resonance Conference (ENC)
    • Place of Presentation
      Asilomar Conference Center (California, USA)
    • Year and Date
      2017-03-26
    • Related Report
      2016 Research-status Report
  • [Presentation] DNA塩基配列がヘム-DNA複合体の構造と機能に与える影響2017

    • Author(s)
      片平祐弥,柴田友和, 松井亨, 守橋健二, 渡部明莉, 中尾知美, 柳澤幸子, 小倉尚志, 山本泰彦
    • Organizer
      日本化学会 第97春季年会(2017)
    • Place of Presentation
      慶応義塾大学日吉キャンパス(神奈川県横浜市)
    • Year and Date
      2017-03-16
    • Related Report
      2016 Research-status Report
  • [Presentation] 種々のフッ素化ヘムと四重鎖DNA[d(TTAGGG)]4の複合 体の機能と構造2017

    • Author(s)
      篠宮僚介, 片平祐弥, 柴田友和, 小倉尚志, 柳澤幸 子, 中尾知美, 鈴木秋弘, 山本泰彦
    • Organizer
      日本化学会 第97春季年会(2017)
    • Place of Presentation
      慶応義塾大学日吉キャンパス(神奈川県横浜市)
    • Year and Date
      2017-03-16
    • Related Report
      2016 Research-status Report
  • [Presentation] ヘムの系統的化学修飾および遠位アミノ酸置換がミオグロビンの機能に与える影響2017

    • Author(s)
      渡邉美帆, 金井佑生, 西村龍, 柴田友和, 松尾貴史, 廣田俊, 柳澤幸子, 小倉尚志, 鈴木秋弘, 根矢三郎, 山本泰彦
    • Organizer
      日本化学会 第97春季年会(2017)
    • Place of Presentation
      慶応義塾大学日吉キャンパス(神奈川県横浜市)
    • Year and Date
      2017-03-16
    • Related Report
      2016 Research-status Report
  • [Presentation] デオキシミオグロビンとデオキシ西洋わさびペルオキシダーゼにおけるヘムの電子状態の比較2017

    • Author(s)
      並木孝介, 柴田友和, 鈴木秋弘, 根矢三郎, 山本泰彦
    • Organizer
      日本化学会 第97春季年会(2017)
    • Place of Presentation
      慶応義塾大学日吉キャンパス(神奈川県横浜市)
    • Year and Date
      2017-03-16
    • Related Report
      2016 Research-status Report
  • [Presentation] ヘムと四重鎖DNAの複合体の構造解析2017

    • Author(s)
      越智健太郎, 山本泰彦, 柴田友和, 萩原正規, 逸見光
    • Organizer
      日本化学会 第97春季年会(2017)
    • Place of Presentation
      慶応義塾大学日吉キャンパス(神奈川県横浜市)
    • Year and Date
      2017-03-16
    • Related Report
      2016 Research-status Report
  • [Presentation] Characterization of peroxidase cycle through a change in electron density of heme atom2017

    • Author(s)
      1.Kosuke Namiki, Tomokazu Shibata, Saburo Neya, Akihiro Suzuki, and Yasuhiko Yamamoto
    • Organizer
      6th Georgian Bay International Conference on Bioinorganic Chemistry
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] Heme-DNA Complexes2017

    • Author(s)
      Yasuhiko Yamamoto, Tomokazu Shibata, Yuya Katahira, Kentaro Ochi, Yusaku Nakayama, Hulin Tai, Akari Watanabe, Tomomi Nakao, Sachiko Yanagisawa, Takashi Ogura, Hikaru Hemmi, Masaki Hagihara, Akihiro Suzuki, and Saburo Neya
    • Organizer
      14th International Symposium on Applied Bioinorganic Chemistry(ISABC14)
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] ミオグロビンにおけるヘム配向の決定機構の解明2017

    • Author(s)
      中村俊平、金井佑生、原田彩佳、柴田友和、西村龍、並木孝介、渡邉美帆、湯本史明、千田俊哉、鈴木秋弘、根矢三郎、山本泰彦
    • Organizer
      第44回生体分子科学討論会
    • Related Report
      2017 Research-status Report
  • [Presentation] ヘムの電子構造および遠位アミノ酸変異がミオグロビンの機能調節に与える影響2017

    • Author(s)
      渡邉美帆、金井佑生、西村龍、柴田友和、松尾貴史、廣田俊、柳澤幸子、小倉尚志、鈴木秋弘、根矢三郎、山本泰彦
    • Organizer
      錯体化学会 第67回討論会
    • Related Report
      2017 Research-status Report
  • [Presentation] ミオグロビンのオキシ体における共鳴混成体の解析2017

    • Author(s)
      長谷川和康、齋藤真器名、瀬戸誠、小林康浩、太田雄大、柳澤幸子、小倉尚志、山本泰彦、柴田友和、根矢三郎、鈴木秋弘
    • Organizer
      錯体化学会 第67回討論会
    • Related Report
      2017 Research-status Report
  • [Presentation] Heme as a Prosthetic Group of DNAzymes2017

    • Author(s)
      Yasuhiko Yamamoto
    • Organizer
      The First University of Tsukuba and University of Grenoble-Alpes Joint Symposium
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] ヘム軸配位子ヒスチジンの電子構造における共鳴がミオグロビンの外部配位子識別に与える影響2017

    • Author(s)
      山本泰彦、田口耕太朗、鳥澤真鈴、渡邉美帆、西村龍、柴田友和、鈴木秋弘、根矢三郎、逸見光
    • Organizer
      第56回 NMR討論会(2017)
    • Related Report
      2017 Research-status Report
  • [Presentation] 四重鎖DNAとヘムが拓く物質科学2017

    • Author(s)
      山本泰彦
    • Organizer
      エネルギー物質科学研究センター(TREMS)スタートアップミーティング
    • Related Report
      2017 Research-status Report
    • Invited
  • [Presentation] 四重鎖DNAとヘムの相互作用が拓く物質科学2017

    • Author(s)
      山本泰彦
    • Organizer
      第一回プレ戦略研究会「次世代物質・デバイス戦略開発拠点」
    • Related Report
      2017 Research-status Report
    • Invited
  • [Presentation] Characterization of Complexes between heme and G-Quadruplex DNAs Formed from Human Telomere-Related Sequences2017

    • Author(s)
      Tomokazu Shibata, Kentaro Ochi, Haruka Araki, Yusaku Nakayama, Ryosuke Shinomiya, Sachiko Yanagisawa, Takashi Ogura, Hikaru Hemmi, Dipankar Sen, and Yasuhiko Yamamoto
    • Organizer
      The second international symposium on biofunctional chemistry(ISBC2017)
    • Related Report
      2017 Research-status Report
  • [Presentation] Characterization of Peroxidase Activities and Structures of Complexes, between Chemically Modified Hemes and All Parallel G-Quadruplex DNA, formed from d(TTAGGG)2017

    • Author(s)
      Ryosuke Shinomiya, Tomokazu Shibata, Sachiko Yanagisawa, Takashi Ogura, Akihiro Suzuki, Saburo Neya, Dipankar Sen, and Yasuhiko Yamamoto
    • Organizer
      The second international symposium on biofunctional chemistry(ISBC2017)
    • Related Report
      2017 Research-status Report
  • [Presentation] ヘムタンパク質の電子論2017

    • Author(s)
      山本泰彦
    • Organizer
      生命の機能とかたち、連携セミナーシリーズ第4回
    • Related Report
      2017 Research-status Report
    • Invited
  • [Presentation] Characterization of Complexes between Heme and G-quadruplex DNAs2017

    • Author(s)
      Yasuhiko Yamamoto Tomokazu Shibata, Yusaku Nakayama Ryosuke Shinomiya and Haruka Araki
    • Organizer
      2018 Joint Symposium on Energy Materials Science and Technology (Workshop of Pre-Strategic Initiatives)
    • Related Report
      2017 Research-status Report
    • Invited
  • [Presentation] Characterization of Peroxidase Activities and Heme Coordination Structures of Complexes between Chemically Modified Hemes and G-quadruplex DNA formed from d(TTAGGG)2017

    • Author(s)
      Ryosuke Shinomiya, Tomokazu Shibata, Takashi Ogura, Sachiko Yanagisawa, Akihiro Suzuki, Saburo Neya, Dipankar Sen, and Yasuhiko Yamamoto
    • Organizer
      2018 Joint Symposium on Energy Materials Science and Technology (Workshop of Pre-Strategic Initiatives)
    • Related Report
      2017 Research-status Report
  • [Presentation] Characterization of Heme Orientational Disorder in a Myoglobin Reconstituted with a fluorinated Heme Cofactor2017

    • Author(s)
      Shunpei Nakamura, Yuki Kanai, Ayaka Harada, Tomokazu Shibata, Ryu Nishimura, Fumiaki Yumoto, Toshiya Senda, Akihiro Suzuki, Saburo Neya, and Yasuhiko Yamamoto
    • Organizer
      2018 Joint Symposium on Energy Materials Science and Technology (Workshop of Pre-Strategic Initiatives)
    • Related Report
      2017 Research-status Report
  • [Presentation] 化学修飾ヘムと四重鎖DNA [d(TTAGGG)]4 の複合体のペルオキシダーゼ活性およびヘム配位構造の解析2017

    • Author(s)
      篠宮僚介, 柴田友和, 小倉尚志, 柳澤 幸子, 鈴木秋弘, 根矢三郎, Sen Dipankar, 山本泰彦
    • Organizer
      日本化学会 第98春季年会 (2018)
    • Related Report
      2017 Research-status Report
  • [Presentation] ヒトテロメア類似塩基配列の四重鎖DNAとヘム複合体のNMR分光法による構造解析2017

    • Author(s)
      山本泰彦, 荒木はるか, 中山優作, 越智健太郎, 柴田友和, 逸見光, 萩原正規、Sen Dipankar
    • Organizer
      日本化学会 第98春季年会 (2018)
    • Related Report
      2017 Research-status Report
  • [Presentation] ヒトテロメア類似塩基配列の四重鎖DNAとヘム複合体のペルオキシダーゼ活性と構造の関係の解析2017

    • Author(s)
      荒木はるか, 中山優作, 越智健太郎, 篠宮僚介, 柴田友和, 逸見光, 萩原正規, 小倉尚志, 柳澤幸子, 鈴木秋弘, 根矢三郎、Sen Dipankar, 山本泰彦
    • Organizer
      日本化学会 第98春季年会 (2018)
    • Related Report
      2017 Research-status Report
  • [Presentation] Characterization of Complexes between Hemes and Parallel G-Quadruplex DNAs2016

    • Author(s)
      Y. Yamamoto, T. Shibata, Y. Katahira, Y. Nakayama, H. Tai, T. Matsui, K. Morihashi, A. Watanabe, T. Nakao, S. Yanagisawa, T. Ogura, A. Suzuki, S. Neya
    • Organizer
      8th Asian Bioligical Inorganic Chemistry Conference(AsBIC 8)
    • Place of Presentation
      The University of Auckland (Auckland, New Zealand)
    • Year and Date
      2016-12-04
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] ヘムと四重鎖DNAの複合体の構造解析2016

    • Author(s)
      越智健太郎, 柴田友和, 逸見光, 萩原正規, 山本泰彦
    • Organizer
      第55回NMR討論会(2016)
    • Place of Presentation
      広島国際会議場(広島県広島市)
    • Year and Date
      2016-11-16
    • Related Report
      2016 Research-status Report
  • [Presentation] Structural characterization of Catalytic DNAs Composed of Heme and Parallel G-quadruplexes2016

    • Author(s)
      Katahira, T. Shibata, T. Matsui, K. Morihashi, A. Watanabe, T. Nakao, S. Yanagisawa, T. Ogura, and Y. Yamamoto
    • Organizer
      第43回国際核酸化学シンポジウム(ISNAC 2016)
    • Place of Presentation
      熊本大学工学部百周年記念館(熊本県熊本市)
    • Year and Date
      2016-09-27
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Effects of DNA Sequence Alteration on Structure of a Complex between Heme and All-Parallel G-Quadruplex2016

    • Author(s)
      T. Shibata, Y. Nakano, Y. Moritaka, Y. Nakayama, Y. Katahira, H. Tai, and ○Y. Yamamoto
    • Organizer
      第43回国際核酸化学シンポジウム(ISNAC 2016)
    • Place of Presentation
      熊本大学工学部百周年記念館(熊本県熊本市)
    • Year and Date
      2016-09-27
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] ヘムと平行型四重鎖DNAの複合体の構造および機能の解析2016

    • Author(s)
      柴田 友和,片平 祐弥,山本 泰彦
    • Organizer
      第17回若手NMR研究会
    • Place of Presentation
      箱根高原ホテル(神奈川県足柄下郡箱根町)
    • Year and Date
      2016-09-10
    • Related Report
      2016 Research-status Report
  • [Presentation] ヘムと四重鎖DNAの複合体の触媒機能測定と構造解析2016

    • Author(s)
      山本 泰彦,片平 祐弥,中山 優作,柴田 友和,渡部 明莉,中尾 知美,柳澤 幸子,小倉 尚志,鈴木 秋弘,根矢 三郎
    • Organizer
      第10回バイオ関連化学シンポジウム
    • Place of Presentation
      石川県立音楽堂(石川県金沢市)
    • Year and Date
      2016-09-07
    • Related Report
      2016 Research-status Report
  • [Presentation] Structural and Functional Characterization of Complexes between Heme and G-quadruplex DNAs Formed from Human Telomere-related Sequences2016

    • Author(s)
      T. Shibata, Y. Katahira, H. Hemmi, and Y. Yamamoto
    • Organizer
      The 27th International Conference on Magnetic Resonance in Biological Systems(ICMRBS2016)
    • Place of Presentation
      京都国際会館(京都府京都市)
    • Year and Date
      2016-08-21
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Book] Experimental Approaches of NMR Spectroscopy, Methodology and Application to Life Science and Materials Science2018

    • Author(s)
      Akira Naito, Tetsuo Asakura, Ichio Shimada, Kiyonori Takegoshi, and Yasuhiko Yamamoto
    • Total Pages
      636
    • Publisher
      Springer
    • ISBN
      9789811059650
    • Related Report
      2017 Research-status Report
  • [Remarks] 筑波大学 数理物質系 生物無機化学研究室

    • URL

      http://www.chem.tsukuba.ac.jp/yamamoto/

    • Related Report
      2019 Annual Research Report 2018 Research-status Report 2017 Research-status Report
  • [Remarks] http://www.chem.tsukuba.ac.jp/yamamoto/

    • Related Report
      2016 Research-status Report

URL: 

Published: 2016-07-20   Modified: 2023-03-08  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi