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Physical and mathematical approaches to the deformation of vesicles---from contact to adhesion, fusion and budding

Research Project

Project/Area Number 16KT0128
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section特設分野
Research Field Mathematical Sciences in Search of New Cooperation
Research InstitutionTohoku University

Principal Investigator

Takagi Izumi  東北大学, 理学研究科, 名誉教授 (40154744)

Co-Investigator(Kenkyū-buntansha) 今井 正幸  東北大学, 理学研究科, 教授 (60251485)
Project Period (FY) 2016-07-19 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2018: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2017: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2016: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Keywordsベシクルの形状 / 幾何学的変分問題 / 面積差弾性エネルギー / 反応拡散方程式 / ベシクルの形態変換 / 面積差弾性エネルギーモデル / 非等方非一様場におけるパターン / Willmore汎函数 / 面積差弾性モデル / 幾何学的変分法 / 束縛条件附変分問題 / Willmore 汎函数 / 束縛条件附き変分問題 / ベシクル / 接触と融合 / 出芽 / 分岐図
Outline of Final Research Achievements

A vesicle is a lipid bilayer forming a spherical or toroidal shell. Its shape is determined as a closed surface which minimizes the sum of the bending energy and area-difference elastic energy, among surfaces having the prescribed surface area and enclosing volume. We found that the Euler-Lagrange equation is an integro-differential equation, which makes mathematical analysis of this model quite difficult. The rigorous analysis of the shape equation for axially symmetric surfaces remains open due to this difficulty. In addition, we considered reaction-diffusion equations with variable coefficients arising from models of two-phase vesicles as well as mechano-chemical models of biological pattern formation. We proved the existence and stability of steady-state solutions for some of such equations; however, we could not study the interaction between the (visco-)elastic deformation of membrane and the chemical patterning within the research period.

Academic Significance and Societal Importance of the Research Achievements

脂質の二重膜がつくる小胞がベシクルであるが,生体膜で囲まれた細胞の形状を決めるメカニズムは,ベシクルの形状を支配するものと本質的には変わらないことが知られており,ベシクルに関する知見は細胞の構造を理解する上で有益である.特に,多成分ベシクルでは,相分離が弾性エネルギー係数に影響を及ぼし形状を変化させる.これは生物の形態形成の仕組みと共通する部分があると考えられる.

Report

(5 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Research-status Report
  • 2017 Research-status Report
  • 2016 Research-status Report
  • Research Products

    (18 results)

All 2020 2019 2018 2017 Other

All Int'l Joint Research (2 results) Journal Article (7 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 7 results) Presentation (8 results) (of which Int'l Joint Research: 8 results,  Invited: 5 results) Remarks (1 results)

  • [Int'l Joint Research] ハイデルベルグ大学(ドイツ)

    • Related Report
      2019 Annual Research Report
  • [Int'l Joint Research] Heidelberg University(ドイツ)

    • Related Report
      2018 Research-status Report
  • [Journal Article] Hysteresis-driven pattern formation in reaction-diffusion-ODE systems2020

    • Author(s)
      Alexandra Koethe, Anna Marciniak-Czochra, Izumi Takagi
    • Journal Title

      Discrete and Continuous Dynamical Systems, Set. A

      Volume: 40 Issue: 6 Pages: 3495-3627

    • DOI

      10.3934/dcds.2020170

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Reproduction of vesicles coupled with a vesicle surface-confined enzymatic polymerization2019

    • Author(s)
      Minoru Kurisu, Harutaka Aoki, Takehiro Jimbo, Yuka Sakuma, Masayuki Imai, Sandra Serrano-Luginbuehl, and Peter Walde
    • Journal Title

      Communications Chemistry

      Volume: 2 Pages: 117-117

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Locator function for concentration points in a spatially heterogeneous semilinear Neumann problem,2019

    • Author(s)
      I. Takagi and H. Yamamoto
    • Journal Title

      Indiana University Mathematics Journal

      Volume: 68 Issue: 1 Pages: 63-103

    • DOI

      10.1512/iumj.2019.68.7560

    • Related Report
      2018 Research-status Report
    • Peer Reviewed
  • [Journal Article] Locator function for concentration points in a spatially heterogeneous semilinear Neumann problem,2019

    • Author(s)
      Izumi Takagi and Hiroko Yamamoto
    • Journal Title

      Indiana University Mathematics Journal

      Volume: 掲載決定

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] Molecular mechanism of vesicle division induced by coupling between lipid geometry and membrane curvatures2018

    • Author(s)
      Naohito Urakami, Takehiro Jimbo, Yuka Sakuma, and Masayuki Imai
    • Journal Title

      Soft Matter

      Volume: 14 Pages: 3018-3027

    • Related Report
      2018 Research-status Report
    • Peer Reviewed
  • [Journal Article] Molecular mechanism of vesicle division induced by coupling between lipid geometry and membrane curvatures2018

    • Author(s)
      Urakami Naohito、Jimbo Takehiro、Sakuma Yuka、Imai Masayuki
    • Journal Title

      Soft Matter

      Volume: 14 Issue: 16 Pages: 3018-3027

    • DOI

      10.1039/c7sm02188g

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] Migration of Phospholipid Vesicles Can Be Selectively Driven by Concentration Gradients of Metal Chloride Solutions2017

    • Author(s)
      Atsuji Kodama, Yuka Sakuma, Masayuki Imai, Toshihiro Kawakatsu, Nicolas Puff, and Miglena I. Angelova
    • Journal Title

      Langmuir

      Volume: 33 Issue: 40 Pages: 10698-10706

    • DOI

      10.1021/acs.langmuir.7b02617

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Presentation] Formation of stable patterns for a reaction-diffusion-ODE system in a spatially heterogeneous environment2020

    • Author(s)
      Conghui Zhang
    • Organizer
      The 21st Northeastern Symposium on Mathematical Analysis
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Morphology of vesicle aggregates2019

    • Author(s)
      Kei Murakami, Takuma Kono,Ryuta Ebihara, Yuka Sakuma, Masayuki Imai, Primoz Ziherl
    • Organizer
      Mini Conference on Physical Chemistry of Molecular Assembly, Tokyo
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Concentration phenomenon in stationary solutions of a spatially heterogeneous reaction-diffusion equation2018

    • Author(s)
      Hiroko Yamamoto
    • Organizer
      The 12th AIMS Conference on Dynamical systems, Differential Equations and Applications
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] Morphology of a Model Multicellular Organism2018

    • Author(s)
      T. Kono, R. Ebihara, K. Murakami, Y. Sakuma, M. Imai and P. Ziherl
    • Organizer
      Nano-structured soft matter
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] Steady States of the FitzHugh-Nagumo equations with non-diffusive activator and diffusive inhibitor2018

    • Author(s)
      Izumi Takagi
    • Organizer
      The Third Hale Conference on the Dynamics of Differential Equations
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Patterns generated by FitzHugh-Nagumo equations with nondiffusive activator and diffusive inhibitor2017

    • Author(s)
      Izumi Takagi
    • Organizer
      Stepping Stone Symposium on Theoretical and Numerical Analysis of PDEs 2017
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Self-reproduction of vesicles: membrane physics approach2017

    • Author(s)
      M. Imai, Y. Sakuma, T. Jimbo, T. Kawakatsu, and N. Urakami
    • Organizer
      The Origin of Life - Synergy among the RNA, Protein and Lipid Worlds
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Morphologies in Vesicle-Vesicle Adhesion2017

    • Author(s)
      M. Imai
    • Organizer
      Association in Solution IV
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Remarks] ベシクルの変形の物理と数理

    • URL

      http://morphos.jp/vesicle/

    • Related Report
      2017 Research-status Report

URL: 

Published: 2016-07-20   Modified: 2023-03-08  

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