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Molecular mechanisms of induction and suppression of mutations accompanied with bypass of DNA damages

Research Project

Project/Area Number 17013041
Research Category

Grant-in-Aid for Scientific Research on Priority Areas

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionKyoto University

Principal Investigator

OHMORI Haruo  Kyoto University, ウイルス研究所, 准教授 (10127061)

Project Period (FY) 2005 – 2009
Project Status Completed (Fiscal Year 2009)
Budget Amount *help
¥48,500,000 (Direct Cost: ¥48,500,000)
Fiscal Year 2009: ¥9,700,000 (Direct Cost: ¥9,700,000)
Fiscal Year 2008: ¥9,700,000 (Direct Cost: ¥9,700,000)
Fiscal Year 2007: ¥9,700,000 (Direct Cost: ¥9,700,000)
Fiscal Year 2006: ¥9,700,000 (Direct Cost: ¥9,700,000)
Fiscal Year 2005: ¥9,700,000 (Direct Cost: ¥9,700,000)
KeywordsDNA損傷バイパス / YファミリーDNAポリメラーゼ / 突然変異誘発 / 分子間相互作用 / 結合認識配列 / 細胞周期チェックポイント / 結合モチーフ配列 / REV3 / REV7 / MAD2 / DAN損傷バイパス / DNAポリメラーゼ / PCNA / Polκ / Polη / Polζ / DNA損傷 / 損傷バイパス合成 / タンパク間相互作用 / MAD2L2 / 損傷バイパス / 突然変異 / 発がん / ベンゾピレン / 皮膚ガン / 肺がん / 免疫遺伝子 / 体細胞超変異 / ピエシリン
Research Abstract

Mammalians have multiple DNA polymerases for translesion DNA synthesis (TLS), which show different specificities for lesions to bypass. In order to investigate how a TLS DNA polymerase appropriate for bypassing a given DNA lesion is recruited, we studied on the interactions of human Polκ, Polη or Polι with other proteins. Polκ, Polη and Polι each interact with a C-terminal region of REV1 (REV1-CTD). We found 1) interaction of Polk with REV1-CTD is necessary for its functions, 2) the interaction of Polη is not required for the enzyme to bypass UV-induced lesions, but it may be required for the enzyme to bypass other lesions. Polη interacts with PCNA and also with Rad6-Rad18 complex that ubiquitinates PCNA in DNA-damaged cells. Therefore, Polη likely has a priority to bind Ub-PCNA when Rad6-Rad18 complex modifies PCNA in a stalled replication fork. When Polη cannot bypass the lesion in the stalled replication fork, switching from Polη to another TLS DNA polymerase may occur through their interactions with REV1-CTD.

Report

(6 results)
  • 2009 Annual Research Report   Final Research Report ( PDF )
  • 2008 Annual Research Report
  • 2007 Annual Research Report
  • 2006 Annual Research Report
  • 2005 Annual Research Report
  • Research Products

    (33 results)

All 2010 2009 2008 2007 2006 2005 Other

All Journal Article (22 results) (of which Peer Reviewed: 11 results) Presentation (8 results) Remarks (3 results)

  • [Journal Article] Overlapping in short motif sequences for binding to human REV7 and MAD2 proteins.2010

    • Author(s)
      T Hanafusa, T Habu, J Tomida, E Ohashi, Y Murakumo, H Ohmori.
    • Journal Title

      Genes Cells 15

      Pages: 281-296

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Overlapping in short motif sequences for binding to human REV7 and MAD2 proteins2010

    • Author(s)
      T.Hanafusa, et al.
    • Journal Title

      Genes Cells 15

      Pages: 281-296

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Separate roles of structured and unstructured regions of Y-family DNA polymerases.2009

    • Author(s)
      H Ohmori, T Hanafusa, E Ohashi, C Vaziri.
    • Journal Title

      Adv. Prot. Chem. Struct. Biol. 78

      Pages: 99-146

    • Related Report
      2009 Final Research Report
  • [Journal Article] Structural basis for novel interactions between human translesion synthesis polymerases and proliferating cell nuclear antigen.2009

    • Author(s)
      A Hishiki, H Hashimoto, T Hanafusa, K Kamei, E Ohashi, T Shimizu, H Ohmori, M Sato.
    • Journal Title

      J. Biol. Chem. 284

      Pages: 10552-10569

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Identification of a novel REV1 -interacting motif necessary for DNA polymeraseκfunction.2009

    • Author(s)
      E Ohashi, T Hanafusa, K Kamei, I Song, J Tomida, H Hashimoto, C Vaziri, H Ohmori.
    • Journal Title

      Genes Cells 14

      Pages: 101-111

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Separate roles of structured and unstructured regions of Y-family DNA polymerases2009

    • Author(s)
      H.Ohmori, T.Hanafusa, E.Ohashi, C.Vaziri
    • Journal Title

      Adv.Prot.Chem.Struct.Biol 78

      Pages: 99-146

    • Related Report
      2009 Annual Research Report
  • [Journal Article] Interaction with DNA polymerase η is required for nuclear accumulation of REV1 and suppression of spontaneous mutations in human cells.2009

    • Author(s)
      J.Akagi, et al.
    • Journal Title

      DNA Repair 8

      Pages: 585-599

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Identification of a novel REV1-interacting motifnecessary for DNA polymerase κ function2009

    • Author(s)
      Ohashi, et.al.
    • Journal Title

      Genes to Cells 19

      Pages: 101-111

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Interaction with DNA polymerase h is required fornuclear accumulation of REV1 and suppression of2009

    • Author(s)
      Akagi, et.al.
    • Journal Title

      DNA Repair 8

      Pages: 585-599

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Structural basis for novel interactions between humantranslesion synthesis polymerases and proliferating cell2009

    • Author(s)
      Hishiki, et.al.
    • Journal Title

      Journal of Biological Chemistry 284

      Pages: 10552-10560

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] DNA damage-induced ubiquitylation of RFC2 subunit of Replication Factor C complex.2008

    • Author(s)
      Tomida J., et. al.
    • Journal Title

      J. Biological Chemistry 283

      Pages: 9071-9079

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Integrating S-phase checkpoint signaling with trans-lesion synthesis of bulky DNA adducts2007

    • Author(s)
      Barkley LR, Ohmori H, Vaziri C.
    • Journal Title

      Cell Biochemistry and Biophysics 47

      Pages: 393-408

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Translesion DNA synthesis across mono ADP-rybosylated dG by Y-family DNA polymerases2007

    • Author(s)
      Kawanishi M., et. al.
    • Journal Title

      New Developments in Mutation Research

      Pages: 133-148

    • Related Report
      2007 Annual Research Report
  • [Journal Article] Integrating S-phase checkpoint signaling with trans-lesion synthesis of bulky DNA addcuts2007

    • Author(s)
      Barkley LM, Ohmori H, Vaziri C
    • Journal Title

      Cell Biochemistry and Biophysics (in press)

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Translesion DNA synthesis across mono ADP-ribosylated dG by Y-family DNA polymerases2007

    • Author(s)
      Kawanishi M, Matsukawa K, Ohashi E, Takamura T, 他7名
    • Journal Title

      New Developments in Mutation Research (in press)

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Rad18 regulates DNA polymerase k and is required for recovery from S-phase checkpoint-mediated arrest.2006

    • Author(s)
      Bi X, Barkley LR, Slater DM, Tateishi S, Yamaizumi M, Ohmori
    • Journal Title

      Molecular and Cellular Biology 26

      Pages: 3257-3540

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Rad18 regulates DNA polymerase kappa and is required for recoevery from S-phase checkpoint-mediated arrest2006

    • Author(s)
      X.Bi et al.
    • Journal Title

      Molecular and Cellualar Biology 26(in press)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Translesion DNA synthesis across mono ADP-ribosylated dG by Y-family DNA polymerases2006

    • Author(s)
      M.Kawanishi et al.
    • Journal Title

      Developments in Mutation Research (in press)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] DNA Polymeraseκis specifically required for recovery from the benzo[a]pyrene-dihydrodiol epoxide (BPDE)-induced S-phase checkpoint.2005

    • Author(s)
      X Bi, DM Slater, H Ohmori, C Vaziri C.
    • Journal Title

      J. Biol. Chem. 280

      Pages: 22343-22355

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Normal immunoglobulin gene somatic hypremutation in Polk-Poli double deficient mice.2005

    • Author(s)
      T.Shimizu et al.
    • Journal Title

      Immunological Letters 9

      Pages: 259-264

    • Related Report
      2005 Annual Research Report
  • [Journal Article] DNA polymerase kappa is specifically required for recovery from the benzo[a]pyrene-dihydrodiol epoxide2005

    • Author(s)
      X.Bi et al.
    • Journal Title

      J.Biological Chemistry 280

      Pages: 22343-22355

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Error-prone and inefficient replication across 8-hydroxyguanine (8-oxoguanine) in human and mouse ras gene2005

    • Author(s)
      P.Jaloszynski et al.
    • Journal Title

      Genes to Cells 10

      Pages: 543-550

    • Related Report
      2005 Annual Research Report
  • [Presentation] ヒト及び酵母におけるREV7とMAD2の結合モチーフ配列の部分的オーバーラッピング2009

    • Author(s)
      花房朋、土生敏行、村雲芳樹、冨田純也、大橋英治、大森治夫
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2009-12-09
    • Related Report
      2009 Annual Research Report
  • [Presentation] Lesion-bypass DNA polymerases2008

    • Author(s)
      Ohmori H.
    • Organizer
      The 9th AEARU workshop on Molecular Biology and Biochemistry
    • Place of Presentation
      Hong Kong
    • Year and Date
      2008-03-26
    • Related Report
      2007 Annual Research Report
  • [Presentation] REV7タンパク質とMAD2タンパク質の結合モチーフ配列のオーバーラッピング2008

    • Author(s)
      花房朋, 村雲芳樹, 原幸大, 橋本博, 大橋英治, 大森治夫
    • Organizer
      第31回日本分子生物学会年会及び第81回日本生化学会大会
    • Place of Presentation
      神戸
    • Related Report
      2009 Final Research Report
  • [Presentation] Overlapping of human REV7- and MAD2-binding motif sequences2008

    • Author(s)
      Hanafusa, et.al.
    • Organizer
      The 6th 3R symposium
    • Place of Presentation
      静岡県掛川市ヤマハリゾート
    • Related Report
      2008 Annual Research Report
  • [Presentation] Protein-protein interactions during translesion DNA synthesis2007

    • Author(s)
      大森治夫
    • Organizer
      第30回日本分子生物学会年会及び第80回日本生化学会大会
    • Place of Presentation
      横浜
    • Related Report
      2009 Final Research Report
  • [Presentation] Interactions between hREV1 and three Y-family DNA polymerases.2006

    • Author(s)
      大橋英治, 花房朋亀井恵二郎、大森治夫
    • Organizer
      20th IUBMB International Congress of Biochemistry and Molecular Biology and 11th FAOBMB Congress.
    • Place of Presentation
      京都
    • Related Report
      2009 Final Research Report
  • [Presentation] Interactions between hREV1 and three Y-family DNA polymerases.2005

    • Author(s)
      大橋英治, 花房朋亀井恵二郎、大森治夫
    • Organizer
      The 22nd Radiation Biology Center, International symposium
    • Place of Presentation
      京都
    • Related Report
      2009 Final Research Report
  • [Presentation] Interactions between hREV1 and three Y-family DNA polymerases.2005

    • Author(s)
      大橋英治, 花房朋亀井恵二郎、大森治夫
    • Organizer
      The 5th 3R symposium
    • Place of Presentation
      兵庫
    • Related Report
      2009 Final Research Report
  • [Remarks]

    • URL

      http://www.virus.kyoto-u.ac.jp/Lab/ohmori.html

    • Related Report
      2009 Final Research Report
  • [Remarks]

    • URL

      http://www.virus.kyoto-u.ac.jp/Lab/ohmori.html

    • Related Report
      2009 Annual Research Report
  • [Remarks]

    • URL

      http://www.virus.kyoto-u.ac.jp/Lab/ohmori/html

    • Related Report
      2007 Annual Research Report

URL: 

Published: 2005-04-01   Modified: 2018-03-28  

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