| Budget Amount *help |
¥70,100,000 (Direct Cost: ¥70,100,000)
Fiscal Year 2009: ¥14,500,000 (Direct Cost: ¥14,500,000)
Fiscal Year 2008: ¥14,500,000 (Direct Cost: ¥14,500,000)
Fiscal Year 2007: ¥13,300,000 (Direct Cost: ¥13,300,000)
Fiscal Year 2006: ¥13,300,000 (Direct Cost: ¥13,300,000)
Fiscal Year 2005: ¥14,500,000 (Direct Cost: ¥14,500,000)
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| Research Abstract |
We have developed a genome comparison algorithm, named Murasaki, makes it possible to identify well-conserved regions within multiple large sequences on the scale of several hundred megabases in few minutes using a single CPU. Murasaki can perform a sensitive alignment of eight mammalian genomes (human, chimp, rhesus, orangutan, mouse, rat, dog, and cow) in 21 hours CPU time (42 minutes wall time). This is the first single-pass comparison algorithm for multiple mammalian genomes.
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