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Elucidation of molecular mechanisms of neurological diseases based on genome analysis

Research Project

Project/Area Number 17019006
Research Category

Grant-in-Aid for Scientific Research on Priority Areas

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionThe University of Tokyo

Principal Investigator

TSUJI Shoji  The University of Tokyo, 医学部附属病院, 教授 (70150612)

Co-Investigator(Kenkyū-buntansha) ONODERA Osamu  新潟大学, 大学院・医学系研究科, 准教授 (20303167)
MURAYAMA Shigeo  東京都高齢者研究福祉振興財団, 東京都老人総合研究所臨床科学研究グループ, 参事研究員 (50183653)
後藤 順  東京大学, 医学部附属病院, 講師 (10211252)
高橋 祐二  東京大学, 医学部附属病院, 助教 (00372392)
百瀬 義雄 (百瀬 義男)  東京大学, 医学部附属病院, 特任助教 (30359624)
Co-Investigator(Renkei-kenkyūsha) GOTO Jun  東京大学, 医学部附属病院, 講師 (10211252)
TAKAHASHI Yuji  東京大学, 医学部附属病院, 助教 (00372392)
Project Period (FY) 2005 – 2009
Project Status Completed (Fiscal Year 2009)
Budget Amount *help
¥781,600,000 (Direct Cost: ¥781,600,000)
Fiscal Year 2009: ¥156,400,000 (Direct Cost: ¥156,400,000)
Fiscal Year 2008: ¥156,200,000 (Direct Cost: ¥156,200,000)
Fiscal Year 2007: ¥161,700,000 (Direct Cost: ¥161,700,000)
Fiscal Year 2006: ¥163,400,000 (Direct Cost: ¥163,400,000)
Fiscal Year 2005: ¥143,900,000 (Direct Cost: ¥143,900,000)
Keywordsゲノム / 脳神経疾患 / 遺伝子 / 遺伝学 / 脳・神経 / 分子遺伝学 / 多型解析 / 神経変性疾患 / 脊髄小脳変性症 / 脳血管障害 / 連鎖漢籍 / 相関解析 / 連鎖解析
Research Abstract

This study has focused on elucidation of molecular mechanisms of neurological diseases based on genome analysis, and, eventually, to develop disease-modifying therapy for neurological diseases. This study focused on the broad range of neurological diseases ranging from single gene diseases to polygenic diseases. To facilitate the linkage study for familial diseases, a high throughput linkage analysis system (SNP HiTLink) employing SNP microarrays has been developed and applied for many diseases. Regarding single gene diseases, we have discovered the causative gene for cerebral autosomal recessive arteriopathy with subcortical infarcts and leukoencephalopathy (CARASIL). For sporadic diseases, we have identified a strong disease suseceptibility gene for Parkinson disease. The result emphasizes the paradigm shift from common disease-common variants hypothesis to common disease-multiple rare variants hypothesis.

Report

(6 results)
  • 2009 Annual Research Report   Final Research Report ( PDF )
  • 2008 Annual Research Report
  • 2007 Annual Research Report
  • 2006 Annual Research Report
  • 2005 Annual Research Report
  • Research Products

    (37 results)

All 2010 2009 2008 2007 2006 2005 Other

All Journal Article (33 results) (of which Peer Reviewed: 20 results) Presentation (1 results) Remarks (2 results) Patent(Industrial Property Rights) (1 results)

  • [Journal Article] Familial Ischemic Cerebral Small-Vessel Disease, Alopecia, and Spondylosis Caused by Mutations in the HTRA1 Gene2009

    • Author(s)
      Hara K, Shiga A, Fukutake T, Nozaki H, Miyashita A, Yokoseki A, Kawata H, Koyama A, Arima K, Takahashi T, Ikeda M, Shiota H, Tamura M, Shimoe Y, Hirayama M, Arisato T, Yanagawa S, Tanaka A, Nakano I, Ikeda S, Yoshida Y, Yamamoto T, Ikeuchi T, Kuwano R, Nishizawa M, Tsuji S, Onodera O.
    • Journal Title

      New Engl J Med 360

      Pages: 1729-1739

    • Related Report
      2009 Final Research Report
  • [Journal Article] Association of HTRA1 mutations and familial ischemic cerebral small-vessel disease2009

    • Author(s)
      Hara K, Shiga A, Fukutake T, et al.
    • Journal Title

      New Engl.J.Med. 360

      Pages: 1729-1739

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Multicenter Analysis of Glucocerebrosidase Mutations in Park inson's Disease2009

    • Author(s)
      Sidransky E, Nalls MA, Aasly JO, et al.
    • Journal Title

      New Engl.J.Med. 361

      Pages: 1651-1661

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] SNP haplotype mapping in a small ALS family2009

    • Author(s)
      Krueger KA, Tsuji S, Fukuda Y, et al.
    • Journal Title

      PLoS One 4

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Determination of editors at the novel A-to-I editing positions2008

    • Author(s)
      Nishimoto Y, Yamashita T, Hideya ma T, Tsuji S, Suzuki N, Kwak S
    • Journal Title

      Neurosci Res. 61

      Pages: 201-206

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Familial cases presenting very early onset autosomal dominant Alzheimer' s disease with D43T in presenilin-1 gene : Implication for genotype-phenotype correlation2008

    • Author(s)
      Arai , N, Kishino, A, Takahashi, Y, Ida, M., Goto, J, Tsuji, S.
    • Journal Title

      Neurogenetics 9

      Pages: 65-67

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Development of high-throughput microarray-based resequencing system for neurologica1 disorders and its application to molecular genetics of amyotrophic lateral sclerosis2008

    • Author(s)
      Takahashi, Y, Seki, N, Ishiura, H, Goto, J and Tsuji, S.
    • Journal Title

      Arch Neurol 65

      Pages: 1326-1332

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Severe neurological phenotypes of Q129 DRPLA transgenic mice serendipitously created by en masse expansion of CAG repeats in Q76 DRPLA mice2008

    • Author(s)
      Sato, T, Miura, M, Yamada, M, Aosaki, T and Tsuji, S
    • Journal Title

      Hum. Mol. Genet. 18

      Pages: 723-736

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Variant between CPT1B and CHKB associated with susceptibility to narcoleps Y2008

    • Author(s)
      Miyagawa T, Kawashima M, Tsuji S, Tokunaga K
    • Journal Title

      Nat Genet. 40

      Pages: 1324-1328

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Appropriate data cleaning methods for genome-wide association study2008

    • Author(s)
      Miyagawa T, Nishida N, Ohashi J, Tsuji S, Tokunaga K
    • Journal Title

      J Hum Genet. 53

      Pages: 883-893

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Novel locus for benign hereditary chorea with adult onset maps to chromosome 8q21.3-q23.32007

    • Author(s)
      Shimohata T, Hara K, Sanpe, K,…Tsuji S, and Honma Y.
    • Journal Title

      Brain 130

      Pages: 302-309

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Multiplex families with multiple system atrophy2007

    • Author(s)
      Hara, K., Momose, Y., …and Tsuji, S.
    • Journal Title

      Arch. Neurol 64

      Pages: 545-551

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Asian Origin for the Worldwide-Spread Mutational Event in Machado-Joseph Disease.2007

    • Author(s)
      Martins S, Calafell F,…Tsuji, S,…Sequeiros, J.
    • Journal Title

      Arch Neurol. 64

      Pages: 1502-1508

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Total deletion and a missense mutation of ITPR1 in Japanese SCA15 families.2007

    • Author(s)
      Hara, K, Shiga, A, Nozaki, H,…Tsuji, S,…and Onodera, O.
    • Journal Title

      Ann Neurol 64

      Pages: 544-544

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Aprataxin, causative gene product, for EAOH/AOA1, repairs DNA single-strand breaks with damaged 3'-phosphate and 3'-phosphoglycolate ends.2007

    • Author(s)
      Takahashi, T., Tada, M.,…Tsuji, S., Nishizawa, M., Onodera, O.
    • Journal Title

      Nucleic Acids Res 35

      Pages: 3797-3809

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Aprataxin, causative gene product for EAOH/AOAI, repairs DNA single-strand breaks with 3'-phosphate and 3'-phosphoglycolate ends2007

    • Author(s)
      Takahashi T, Tada M, Igarashi S, Koyama A, Date H, Yokoseki A, Shiga A, Yoshida Y, Tsuji S, Nishizawa M, Onodera O
    • Journal Title

      Nucleic Acids Res (in press)

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Novel locus for benign hereditary chorea with adult-onset maps to chromosome 8q21.3-q23.32007

    • Author(s)
      Shimohata T, Hara K, Sanpei K, Nunomura J, Maeda T, Kawachi I, Kanazawa M, Kasuga K, Miyashita A, Kuwano R, Hirota K, Tsuji S, Onodera O, Nishizawa M, Honma Y
    • Journal Title

      Brain (In press)

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Multiplex families with multiple system atrophy.2007

    • Author(s)
      Hara K, Momose Y, Tokiguchi S, Shimohata M, Terajima K, Onodera O, Kakita A, Yamada M, Takahashi H, Hirasawa M, Mizuno Y, Ogata K, Goto J, Kanazawa I, Nishizawa M, Tsuji S
    • Journal Title

      Arch Neurol. 64(4)

      Pages: 545-551

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Neuronal atrophy and synaptic alteration in a mouse model of dentatorubral-pallidoluyslan atrophy.2006

    • Author(s)
      SaKai K, Yamada M, Sato T, Yamada M, Tsuji S, Takahashi H
    • Journal Title

      Brain 129(PT9)

      Pages: 2353-2362

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Interference of CREB-dependent transcriptional activation by expanded polyglutamine stretches - Augmentation of transcriptional activation as a potential therapeutic strategy for polyglutamine diseases2005

    • Author(s)
      Shimohata, M, Shimohata T, Igarashi, S, Naruse, S, Tsujil, S
    • Journal Title

      J. Neurochem 93

      Pages: 654-663

    • Related Report
      2006 Annual Research Report
  • [Journal Article] An LRRK2 mutation as a cause for the parkinsonlsm in the original PARK8 family.2005

    • Author(s)
      Funayama M, Hasegawa K, Ohta E, Kawashima N, Komiyama M, Kowa H, Tsuji S, Obata F
    • Journal Title

      Ann Neurol 57(6)

      Pages: 918-921

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Spinocerebellar ataxia type 15.2005

    • Author(s)
      Gardner RJ, Knight MA, Hara K, Tsuji S, Forrest SM, Storey E
    • Journal Title

      Cerebellum 4(1)

      Pages: 47-50

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Interference of CREB-dependent transcriptional activation by expanded polyglutamine stretches -Augmentation of transcriptional activation as a potential therapeutic strategy for polygluamine diseases2005

    • Author(s)
      Shimohata, M, Shimohata T, Igarashi S, Naruse, S, Tsuji, S.
    • Journal Title

      J.Neurochem 93

      Pages: 654-663

    • Related Report
      2005 Annual Research Report
  • [Journal Article] An LRRK2 mutation as a cause for the parkinsonism in the original PARK8 family.2005

    • Author(s)
      Funayama M, Hasegawa K, Ohta E, Kawashima N, Komiyama M, Kowa H, Tsuji S, Obata F.
    • Journal Title

      Ann Neurol 57(6)

      Pages: 918-921

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Spinocerebellar ataxia type 15.2005

    • Author(s)
      Gardner RJ, Knight MA, Hara K, Tsuji S, Forrest SM, Storey E.
    • Journal Title

      Cerebellum 4(1)

      Pages: 47-50

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Interference with activity-dependent transcriptional activation of BDNF gene depending upon the expanded polyglutamines in neurons.2005

    • Author(s)
      Miyashita T, Tabuchi A, Fukuchi M, Hara D, Kisukeda T, Shimohata T, Tsuji S, Tsuda M.
    • Journal Title

      Biochem Biophys Res Commun 333(4):

      Pages: 1241-1248

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Polyglutamine represses cAMP-responsive-element-mediated transcription without aggregate formation.2005

    • Author(s)
      Takahashi T, Nozaki K, Tsuji S, S, Nishizawa M, Onodera O.
    • Journal Title

      Neuroreport 16(3)

      Pages: 295-299

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Mutations for Gaucher disease confer a high susceptibility to Parkinson disease

    • Author(s)
      Mitsui, J, Mizuta, I, Toyoda, A, Toda, T and Tsuji, S
    • Journal Title

      Arch Neurol (in press)

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A novel ferritin light chain gene mutation in a Japanese family with neuroferr itinopathy : description of clinical features and implications for genotype-phenotvne correlations

    • Author(s)
      Kubota, A, Hida, A, Ichikawa, Y, Kanazawa, I, and Tsuji, S
    • Journal Title

      Mov. Disord. (in press)

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Genetic association study on in and around the APOE in late-onset Alzheimer disease in Japanese

    • Author(s)
      Takei N, Miyashita A, Tsuji S, Kanazawa I, Ihara Y, Kuwano R
    • Journal Title

      Genomics (in press)

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Familial Ischemic Cerebral Small-Vessel Disease, Alopecia, and Spondylosis Caused by Mutations in the HTRAI Gene

    • Author(s)
      Hara K, Shiga A, Fukutake T, suji S, Onodera O
    • Journal Title

      New Engl J Med (in press)

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] TRPM7 is not associated with amyotrophic lateral sclerosis-parkinsonism dementia complex in the Kii peninsula of Japan

    • Author(s)
      Hara K, Kokubo Y, Ishiura H, Kuzuhara S, and Tsuji S
    • Journal Title

      Am. J. Med. Genet. (in press)

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] SNP HiTLink : a high-throughput linkage analysis system employing dense SNP data

    • Author(s)
      Fukuda Y, Nakahara Y, Date H,. akamura E, and Tsuii S
    • Journal Title

      BMC Bioinformatics (in press)

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Presentation] Nation-Wide Survey on the Epidemiology and the Natural History of Spinocerebellar Degenerations in Japan2009

    • Author(s)
      Shoji Tsuji
    • Organizer
      V International Workshop on Machado-Joseph Disese
    • Place of Presentation
      S.Miguel, Portugal
    • Related Report
      2009 Annual Research Report
  • [Remarks] ホームページ等

    • URL

      http://www.genome-sci.jp/

    • Related Report
      2009 Final Research Report
  • [Remarks]

    • URL

      https://www.genome-sci.jp/modules/contents1/rewrite/tc_5.html

    • Related Report
      2009 Final Research Report
  • [Patent(Industrial Property Rights)] Association of HTRA1 mutations and familial ischemic cerebral small-vessel dieases2010

    • Inventor(s)
      辻省次, 小野寺理
    • Industrial Property Rights Holder
      The University of Tokyo
    • Filing Date
      2010-04-20
    • Related Report
      2009 Final Research Report

URL: 

Published: 2005-04-01   Modified: 2018-03-28  

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