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Isolation and characterization of protrudin, a master regulator of neurite formation

Research Project

Project/Area Number 17107004
Research Category

Grant-in-Aid for Scientific Research (S)

Allocation TypeSingle-year Grants
Research Field Cell biology
Research InstitutionKyushu University

Principal Investigator

NAKAYAMA Keiichi  Kyushu University, 生体防御医学研究所, 主幹教授 (80291508)

Co-Investigator(Kenkyū-buntansha) SHIRANE Michiko  九州大学, 生体防御医学研究所, 准教授 (90398082)
Project Period (FY) 2005 – 2009
Project Status Completed (Fiscal Year 2009)
Budget Amount *help
¥111,670,000 (Direct Cost: ¥85,900,000、Indirect Cost: ¥25,770,000)
Fiscal Year 2009: ¥27,690,000 (Direct Cost: ¥21,300,000、Indirect Cost: ¥6,390,000)
Fiscal Year 2008: ¥27,690,000 (Direct Cost: ¥21,300,000、Indirect Cost: ¥6,390,000)
Fiscal Year 2007: ¥22,100,000 (Direct Cost: ¥17,000,000、Indirect Cost: ¥5,100,000)
Fiscal Year 2006: ¥16,640,000 (Direct Cost: ¥12,800,000、Indirect Cost: ¥3,840,000)
Fiscal Year 2005: ¥17,550,000 (Direct Cost: ¥13,500,000、Indirect Cost: ¥4,050,000)
Keywords神経細胞 / 神経突起 / 膜輸送 / Gタンパク質 / リン酸化 / 神経成長因子 / スパイン / Protrudin / 硫酸化脂質 / Rab11 / ノックアウトマウス / 痙性対麻痺 / FYVEドメイン / NGF / ERK / リサイクルエンドソーム / 神経 / 突起形成 / 小胞輸送 / Rab / 再生 / 突起 / プロテオミクス
Research Abstract

Guanosine triphosphatases (GTPases) of the Rab family are key regulators of membrane trafficking, with Rab11 playing a specific role in membrane recycling. We identified a protein, protrudin, that promoted neurite formation through interaction with the guanosine diphosphate (GDP)-bound form of Rab11. Phosphorylation of protrudin by extracellular signal-regulated kinase (ERK) in response to nerve growth factor promoted its association with Rab11-GDP. Down-regulation of protrudin by RNA interference induced membrane extension in all directions and inhibited neurite formation. Thus protrudin regulates Rab11-dependent membrane recycling to promote the directional membrane trafficking required for neurite formation.

Report

(6 results)
  • 2009 Annual Research Report   Final Research Report ( PDF )
  • 2008 Annual Research Report
  • 2007 Annual Research Report
  • 2006 Annual Research Report
  • 2005 Annual Research Report
  • Research Products

    (52 results)

All 2010 2009 2008 2007 2006 2005 Other

All Journal Article (30 results) (of which Peer Reviewed: 9 results) Presentation (13 results) Book (4 results) Remarks (3 results) Patent(Industrial Property Rights) (2 results)

  • [Journal Article] KDM7 is a dual demethylase for histone H3 Lys 9 and Lys 27 and functions in brain development.2010

    • Author(s)
      Tsukada, Y., Ishitani, T., Nakayama, K.I.
    • Journal Title

      Genes Dev 24

      Pages: 432-437

    • Related Report
      2009 Final Research Report
  • [Journal Article] Skp2 targeting suppresses tumorigenesis by Arf-p53-independent cellular senescence.2010

    • Author(s)
      Lin, H.K., Chen, Z., Wang, G., Nardella, C., Lee, S.W., Chan, C.H., Yang, W.L., Wang, J., Egia, A., Nakayama, K.I., Cordon-Cardo, C., Teruya-Feldstein, J., Pandolfi, P.P.
    • Journal Title

      Nature 464

      Pages: 374-379

    • Related Report
      2009 Final Research Report
  • [Journal Article] Deciphering the transcriptional complex critical for RhoA gene expression and cancer metastasis.2010

    • Author(s)
      Chan, C.H., Lee, S.W., Li, C.F., Wang, J., Yang, W.L., Wu, C.Y., Wu, J., Nakayama, K.I., Kang, H.Y., Huang, H.Y., Hung, M.C., Pandolfi, P.P., Lin, H.K.
    • Journal Title

      Nature Cell Biol.

    • Related Report
      2009 Final Research Report
  • [Journal Article] Skp2 is required for survival of aberrantly proliferating Rb1-deficient cells and for tumorigenesis in Rb1+/-mice.2010

    • Author(s)
      Wang, H., Bauzon, F., Ji, P., Xu, X., Sun, D., Locker, J., Sellers, R.S., Nakayama, K., Nakayama, K.I., Cobrinik, D., Zhu, L.
    • Journal Title

      Nature Genet. 42

      Pages: 83-88

    • Related Report
      2009 Final Research Report
  • [Journal Article] KDM7 is a dual demethylase for histone H3 lysines 9 and 27 and functions in brain development2010

    • Author(s)
      Tsukada, Y., Ishitani, T., Nakayama, K.I.
    • Journal Title

      Genes & Development 24

      Pages: 432-437

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] CHD8 suppresses p53-mediated apoptosis through histone H1 recruitment during early embryogenesis.2009

    • Author(s)
      Nishiyama, M., Oshikawa, K., Tsukada, Y., Nakagawa, T., Iemura, S., Natsume, T., Fan, Y., Kikuchi, A., Skoultchi, A.I., Nakayama, K.I.
    • Journal Title

      Nature Cell Biol. 11

      Pages: 172-182

    • Related Report
      2009 Final Research Report
  • [Journal Article] Phosphorylation-dependent regulation of cytosolic localization and oncogenic function of Skp2 by Akt/PKB.2009

    • Author(s)
      Lin, H.K., Wang, G., Chen, Z., Teruya-Feldstein, J., Liu, Y., Chan, C.H., Yang, W.L., Erdjument-Bromage, H., Nakayama, K.I., Nimer, S., Tempst, P., Pandolfi, P.P.
    • Journal Title

      Nature Cell Biol. 11

      Pages: 420-432

    • Related Report
      2009 Final Research Report
  • [Journal Article] Common and specific roles of the related CDK inhibitors p27 and p57 revealed by a knock-in mouse model.2009

    • Author(s)
      Susaki, E., Nakayama, K., Yamasaki, L., Nakayama, K.I.
    • Journal Title

      Proc. Natl. Acad. Sci. U.S.A. 106

      Pages: 5192-5197

    • Related Report
      2009 Final Research Report
  • [Journal Article] Promotion of neurite extension by protrudin requires its interaction with VAMP-associated protein(VAP)2009

    • Author(s)
      Saita, S., Shirane, M., Natume, T., Iemura, S., Nakayama, K.I.
    • Journal Title

      Journal of Biological Chemistry 284

      Pages: 13766-13777

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Fbxo45 forms a novel ubiquitin ligase complex and is required for neuronal development2009

    • Author(s)
      Saiga, T., Fukuda, T., Matsumoto, M., Tada, H., Okano, H.O., Okano, H., Nakayama, K.I.
    • Journal Title

      Molecular and Cellular Biology 29

      Pages: 3529-3543

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] CHD8 suppresses p53-mediated apoptosis through histone H1 recruitment during early embryogenesis2009

    • Author(s)
      Nishiyama, M., et al., Nakayama, K. I.
    • Journal Title

      Nature Cell Biol. 11

      Pages: 172-182

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Common and specific roles of the related CDK inhibitors p27 and p57 revealed by a knock-in mouse model2009

    • Author(s)
      Susaki, E., Nakayama, K., Yamasaki, L, Nakayama, K. I.
    • Journal Title

      Proc. Natl. Acad. Sci. U.S.A. in press

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Promotion of neurite extension by protrudin requires its interaction with VAMP-associated protein (VAP)2009

    • Author(s)
      Saita, S., et al., Nakayama, K. I.
    • Journal Title

      J. Biol. Chem. in press

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Conditional inactivation of Fbxw7 impairs cell-cycle exit during T cell differentiation and results in lymphomatogenesis.2007

    • Author(s)
      Onoyama, I., Tsunematsu, R., Matsumoto, A., Kimura, T., de Alboran, I.M., Nakayama, K., Nakayama, K.I.
    • Journal Title

      J. Exp. Med. 204

      Pages: 2875-2888

    • Related Report
      2009 Final Research Report
  • [Journal Article] Conditional inactivation of Fbxw7 impairs cell-cycle exit during T cell differentiation and results in lymphomatogenesis2007

    • Author(s)
      Onoyama, I., et. al.
    • Journal Title

      J.Exp.Med. 204

      Pages: 2875-2888

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Cyclin D2 translocates p27 out of the nucleus and promotes its degradation at the G0-G1 transition2007

    • Author(s)
      Susaki, E, et. al.
    • Journal Title

      Mol.Cell.Biol. 27

      Pages: 4626-4640

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Anchoring of the 26S proteasome to the organellar membrane by FKBP382007

    • Author(s)
      Nakagawa, T., et.al.
    • Journal Title

      Genes Cells 12

      Pages: 709-719

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Cyclin D2 translocates p27 out of the nucleus and promotes its degradation at the G0-G1 transition.2007

    • Author(s)
      Susaki, E., Nakayama, K., Nakayama, K.I.
    • Journal Title

      Mol. Cell. Biol. (in press)

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Mitogenic signalling and the p16INK4a-Rb pathway cooperate to enforce irreversible cellular senescence.2006

    • Author(s)
      Takahashi, A., Ohtani, N., Yamakoshi, K., Iida, S., Tahara, H., Nakayama, K., Nakayama, K.I., Ide, T., Saya, H., Hara, E.
    • Journal Title

      Nature Cell Biol. 8

      Pages: 1291-1297

    • Related Report
      2009 Final Research Report
  • [Journal Article] Protrudin induces neurite formation by directional membrane trafficking.2006

    • Author(s)
      Shirane, M., Nakayama, K.I.
    • Journal Title

      Science 314

      Pages: 818-821

    • Related Report
      2009 Final Research Report 2006 Annual Research Report
  • [Journal Article] Fbxw8 is essential for Cull-Cul7 complex formation and for placental development.2006

    • Author(s)
      Tsunematsu, R., Nishiyama, M., Kotoshiba, S., Saiga, T., Kamura, T., Nakayama, K.I.
    • Journal Title

      Mol. Cell. Biol. 26

      Pages: 6157-6169

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Fbxw7 contributes to tumor suppression by targeting multiple proteins for ubiquitin-dependent degradation.2006

    • Author(s)
      Fujii, Y., Yadam M., Nishiyama, M., et al., Nakayama, K.I.
    • Journal Title

      Cancer Sci. 97

      Pages: 729-736

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Mitogenic signalling and the p16^<INK4a>-Rb pathway cooperate to enforce irreversible cellular senescence.2006

    • Author(s)
      Tanahashi, A., Ohtani, N., Yamakoshi, K., Iida, S., Tahara, H., Nakayama, K., Nakayama, K.I., Ide, T., Saya, H., Hara, E.
    • Journal Title

      Nature Cell Biol. 8

      Pages: 1291-1297

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Geminin is essential for the development of preimplantation mouse embryos.2006

    • Author(s)
      Hara, K., Nakayama, K.I., Nakayama, K.
    • Journal Title

      Genes Cells 11

      Pages: 1281-1293

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Role of the UBL-UBA protein KPC2 in degradation of p27 at G1 phase of the cell cycle.2005

    • Author(s)
      Hara, T., et al., Nakayama, K.I.
    • Journal Title

      Mol.Cell.Biol. 25

      Pages: 9292-9303

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Mammalian E4 is required for cardiac development and maintenance of the nervous system.2005

    • Author(s)
      Kaneko-Oshikawa, C., et al., Nakayama, K.I.
    • Journal Title

      Mol.Cell.Biol. 25

      Pages: 10953-10964

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Ubiquitylation of RAG-2 by Skp2-SCF links destruction of the V(D)J recombinase to the cell cycle.2005

    • Author(s)
      Jiang H., et al., Nakayama, K.I., Desiderio S.
    • Journal Title

      Mol. Cell 18

      Pages: 699-709

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Deletion of Cdkn1b ameliorates hyperglycemia by maintaining compensatory hyperinsulinemia in diabetic mice.2005

    • Author(s)
      Uchida, T., et al., Nakayama, K.I., Kasuga, M.
    • Journal Title

      Nature Med. 11

      Pages: 175-182

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Role of serine-10 phosphorylation in p27 stabilization revealed by analysis of p27 knock-in mice harboring a serine-10 mutation.2005

    • Author(s)
      Kotake, Y., et al., Nakayama, K.I.
    • Journal Title

      J.Biol.Chem. 280

      Pages: 1095-1102

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Molecular dissection of the interaction between p27 and Kip1 ubiquitylation-promoting complex, the ubiquitin ligase that regulates proteolysis of p27 in G1 Phase.2005

    • Author(s)
      Kotoshiba, S., et al., Nakayama, K.I.
    • Journal Title

      J.Biol.Chem. 280

      Pages: 17674-17700

    • Related Report
      2005 Annual Research Report
  • [Presentation] Comprehensive elucidation of enzyme-substrate relationship in ubiquitylation by differential proteomics: Say good-bye to western blotting.2010

    • Author(s)
      Nakayama, K.I.
    • Organizer
      Biology of the ubiquitin and the ubiquitin-like systems.
    • Place of Presentation
      Jerusalem
    • Year and Date
      2010-03-14
    • Related Report
      2009 Final Research Report
  • [Presentation] Comprehensive elucidation of enzyme-substrate relationship in ubiquitylation by differential proteomics : Say good-bye to western blotting2010

    • Author(s)
      Nakayama, K.I.
    • Organizer
      Biology of the ubiquitin and the ubiquitin-like systems
    • Place of Presentation
      エルサレム
    • Year and Date
      2010-03-14
    • Related Report
      2009 Annual Research Report
  • [Presentation] Comprehensive elucidation of enzyme-substrate relationship by differential proteomics.2009

    • Author(s)
      Nakayama, K.I., Yumimoto, K., Matsumoto, M.
    • Organizer
      The 4th International Workshop on Cell Regulations in Division and Arrest.
    • Place of Presentation
      Onna, Okinawa, Japan
    • Year and Date
      2009-12-02
    • Related Report
      2009 Final Research Report
  • [Presentation] Two F-box prtoteins Skp2 and Fbw7 control cell cycle exit and re-entry.2008

    • Author(s)
      Nakayama, K. I
    • Organizer
      ZOMES V: The Fifth International Symposium on the COP9 signalosome, Proteasome, and eIF3: At the interface between signaling & proteolysis.
    • Place of Presentation
      Yokohama
    • Year and Date
      2008-11-12
    • Related Report
      2009 Final Research Report
  • [Presentation] Cell cycle control during T-cell development.2008

    • Author(s)
      Nakayama, K.I.
    • Organizer
      Japan-German Immunology Seminar "International Conference on Immune Regulation in Health and Disease"
    • Place of Presentation
      Fukuoka
    • Year and Date
      2008-11-05
    • Related Report
      2009 Final Research Report
  • [Presentation] プロトルーディンはRab11-GDPに結合し、特定の方向へ向かう膜輸送により神経突起形成を起こす.2008

    • Author(s)
      中山敬一, 白根道子
    • Organizer
      第60回日本細胞生物学会大会
    • Place of Presentation
      横浜
    • Year and Date
      2008-06-30
    • Related Report
      2009 Final Research Report
  • [Presentation] Conditional inactivation of Fbxw7 results in a defect in cell cycle exit and tumorigenesis.2008

    • Author(s)
      Nakayama, K.I., Onoyama, I., Tsunematsu, R., Matsumoto, A., Nakayama, K.
    • Organizer
      Cold Spring Harbor Symposium "The Cell Cycle"
    • Place of Presentation
      Cold Spring Harbor, NY
    • Year and Date
      2008-05-18
    • Related Report
      2009 Final Research Report
  • [Presentation] Conditional inactivation of Fbxw7 results in a defect in cell cycle exit and tumorigenesis2008

    • Author(s)
      Nakayama, K. I., et al.
    • Organizer
      Cold Spring Harbor Symposium “The Cell Cycle"
    • Place of Presentation
      米国ニューヨーク州コールドスプリングハーバー
    • Year and Date
      2008-05-18
    • Related Report
      2008 Annual Research Report
  • [Presentation] 細胞周期を制御するユビキチンリガーゼと発がん2007

    • Author(s)
      中山 敬一
    • Organizer
      第30回日本分子生物学会年会
    • Place of Presentation
      横浜市
    • Year and Date
      2007-12-14
    • Related Report
      2007 Annual Research Report
  • [Presentation] Fbw7 is required for G0 maintenance and tumor suppression: Lessons from a series of conditional knockout mice.2007

    • Author(s)
      Nakayama, K.I.
    • Organizer
      The Second International Workshop on Cell Regulations in Division and Arrest
    • Place of Presentation
      Onna, Okinawa, Japan
    • Year and Date
      2007-03-26
    • Related Report
      2009 Final Research Report
  • [Presentation] Fbw7 is a key regulator of cell cycle exit during development.2006

    • Author(s)
      Nakayama, K.I.
    • Organizer
      US-Japan Cooperative Research Workshop on Mouse Models for Cell Cycle and Ubiquitin-mediated Degradation
    • Place of Presentation
      Frederick, MD, USA
    • Year and Date
      2006-09-07
    • Related Report
      2009 Final Research Report
  • [Presentation] Fbw7 is a key regulator of cell-cycle arrest and tumorigenesis during development.2006

    • Author(s)
      Nakayama, K.I., Onoyama, I.
    • Organizer
      20th IUBMB International Congress of Biochemistry and Molecular Biology
    • Place of Presentation
      Kyoto, Japan
    • Year and Date
      2006-06-23
    • Related Report
      2009 Final Research Report
  • [Presentation] Protrudin-Rab11 system regulates directional membrane traffic to induce neurite formation.2005

    • Author(s)
      Nakayama, K.I., Shirane, M.
    • Organizer
      International Symposium on "Membrane Dynamics and Cell Regulation"
    • Place of Presentation
      Fukuoka
    • Year and Date
      2005-06-29
    • Related Report
      2009 Final Research Report
  • [Book] 細胞周期:細胞増殖の制御メカニズム. 細胞周期:細胞増殖の制御メカニズム(中山敬一, 中山啓子編)2008

    • Author(s)
      中山敬一, 中山啓子
    • Publisher
      東京
    • Related Report
      2009 Final Research Report
  • [Book] 細胞周期 : 細胞増殖の制御メカニズム2008

    • Author(s)
      中山敬一, 中山啓子
    • Total Pages
      302
    • Publisher
      メディカル・サイエンス・インターナショナル
    • Related Report
      2008 Annual Research Report
  • [Book] 「発がんの分子機構と防御」細胞周期ブレーキp27の分解と発がん2005

    • Author(s)
      中山 敬一
    • Total Pages
      15
    • Publisher
      東京大学出版会
    • Related Report
      2005 Annual Research Report
  • [Book] 細胞周期ブレーキp27の分解と発がん. 発がんの分子機構と防御(笹月健彦, 野田哲生編)

    • Author(s)
      中山敬一
    • Publisher
      東京大学出版会(東京)
    • Related Report
      2009 Final Research Report
  • [Remarks]

    • URL

      http://www.bioreg.kyushu-u.ac.jp/saibou/index.html

    • Related Report
      2009 Final Research Report
  • [Remarks]

    • URL

      http://www.bioreg.kyushu-u.ac.jp/saibou/index.html

    • Related Report
      2009 Annual Research Report
  • [Remarks]

    • URL

      http://www.bioreg.kyushu-u.ac.jp/saibou/index.html

    • Related Report
      2008 Annual Research Report
  • [Patent(Industrial Property Rights)] タンパク質の定量方法2009

    • Inventor(s)
      中山敬一, 松本雅記
    • Industrial Property Rights Holder
      国立大学法人九州大学
    • Industrial Property Number
      2009-169045
    • Filing Date
      2009-07-17
    • Related Report
      2009 Annual Research Report
  • [Patent(Industrial Property Rights)] タンパク質の定量方法2006

    • Inventor(s)
      中山敬一、松本雅記
    • Industrial Property Rights Holder
      国立大学法人九州大学
    • Industrial Property Number
      2009-169045
    • Filing Date
      2006-06-09
    • Related Report
      2009 Final Research Report

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Published: 2005-04-01   Modified: 2016-04-21  

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