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A large-scale screening of Minos-inserted mutants and analysis of genes involved in the mutation in the chordate Clone intestinalis

Research Project

Project/Area Number 17207013
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Developmental biology
Research InstitutionKyoto University

Principal Investigator

SATOH NORIYUKI  Kyoto University, Graduate School of Science, Professor (30025481)

Co-Investigator(Kenkyū-buntansha) SASAKURA Yasunori  University of Tsukuba, Graduate School of Life and Environmental Sciences, Lecturer (10400649)
Project Period (FY) 2005 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥51,480,000 (Direct Cost: ¥39,600,000、Indirect Cost: ¥11,880,000)
Fiscal Year 2007: ¥15,080,000 (Direct Cost: ¥11,600,000、Indirect Cost: ¥3,480,000)
Fiscal Year 2006: ¥15,080,000 (Direct Cost: ¥11,600,000、Indirect Cost: ¥3,480,000)
Fiscal Year 2005: ¥21,320,000 (Direct Cost: ¥16,400,000、Indirect Cost: ¥4,920,000)
KeywordsCiona intestinalis / developmental genetics / insertional mutagenesis / development and differentiation / function of genes / a large-scale screening / microarray / metamorphosis / 大槻模スクリーニング / 発生遺伝子 / 機能解析 / swimming juvenile / セルロース合成酵素遺伝子
Research Abstract

Ciona intestinalis offer the promise of forward-genetics since their life cycle is relatively short, 8-12 weeks from fertilization to Fl embryos, and it is possible to induce self-fertilization within hermaphrodites. The compact genome may also offer opportunity to accomplish mutations leading to visible phenotypes. In Ciona, successful germ-line transgenesis with the Tc1/mariner superfamily transposon, Minos, has been established by ourselves. The aim of the present study is to isolated Minos-inserted mutants as many as possible, and to identify genes that are responsible for the mutation. The present study is also intended to introduce various transgenic techniques into the Ciona system. During the period of 2005-2008, we have isolated approximately 50 mutation lines and 20 transgenic lines. The mutation lines include swimming juveniles (sj) 1-4, balloon (bal), and tail regression failed (trf). All these mutants showed abnormal process of metamorphosis. Interestingly, the sj- I mutant phenotype arises form the insertion of Minos into the promoter region of Ci-CesA, a gene encoding cellulose synthase. We are now analyzing molecular mechanisms involved in the mutations using microarray technique. Transgenic lines include those with GFP expression in embryonic muscle, notochord, or nervous system. These provide useful marker lines for further studies of the expression and function of chordate genes.

Report

(4 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • 2005 Annual Research Report
  • Research Products

    (35 results)

All 2008 2007 2006 2005

All Journal Article (24 results) (of which Peer Reviewed: 9 results) Presentation (10 results) Book (1 results)

  • [Journal Article] Enhancer detection in the ascidian Ciona intestinalis with transposase-expressing lines of Minos2008

    • Author(s)
      Sasakura, Y., et. al.
    • Journal Title

      Developmental Dynamics 237

      Pages: 39-50

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Annual Research Report 2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Enhancer detection in the ascidian Ciona intestinalis with transposase-expressing lines of Minos2008

    • Author(s)
      Sasakura, Y., Konno, A., Mizuno, K., Satoh, N., Inaba, K
    • Journal Title

      Developmental Dynamics 237

      Pages: 39-50

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] High-throughput enhancer trap by re-mobilization of transposon Minos in Ciona intestinalis2007

    • Author(s)
      Awazu, S., et. al.
    • Journal Title

      genesis 45

      Pages: 307-317

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Transposon-mediated transgenesis in a marine invertebrate chordate, Ciona intestinalis2007

    • Author(s)
      Sasakura, Y., et. al.
    • Journal Title

      Genome Biology 8

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Germline transgenesis and insertional mutagenesis in the ascidian Ciona intestinalis2007

    • Author(s)
      Sasakura, Y.
    • Journal Title

      Developmental Dynamics 236

      Pages: 1758-1767

    • NAID

      120007139197

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Culture of Ciona intestinalis in closed systems2007

    • Author(s)
      Joly, J., et. al.
    • Journal Title

      Developmental Dynamics 236

      Pages: 1832-1841

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] High-throughput enhancer trap by re-mobilization of transposon Minos in Ciona intestinalis2007

    • Author(s)
      Awazu, S., Matsuoka, T., Inaba, K., Satoh, N., Sasakura, Y
    • Journal Title

      Genesis 45

      Pages: 307-317

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Transposon-mediated transgenesis in a marine invertebrate chordate, Ciona intestinalis2007

    • Author(s)
      Sasakura, Y., Oogai, Y., Matsuoka, T., Satoh, N., Awazu, S
    • Journal Title

      Genome Biology8 3

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Germline transgenesis and insertional mutagenesis in the ascidian Ciona intestinalis2007

    • Author(s)
      Sasakura, Y
    • Journal Title

      Developmental Dynamics 236

      Pages: 1758-1767

    • NAID

      120007139197

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Culture of Ciona intestinalis in closed systems2007

    • Author(s)
      Joly, J., Kano, S., Matsuoka, T., Auger, H., Hirayama, K., Satoh, N., Awazu, S., Legendre, L., Sasakura, Y
    • Journal Title

      Developmental Dynamics 236

      Pages: 1832-1841

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] High-throughput enhancer trap by remobilization of transposon Minos in Caiona intestinalis2007

    • Author(s)
      Awazu, S., et. al.
    • Journal Title

      genesis 45

      Pages: 307-317

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Germline transgenesis and insertional mutagenesis in the ascidian Ciona intestinalis2007

    • Author(s)
      Sasakura, Y. et. al.
    • Journal Title

      Developmental Dynamics 236

      Pages: 1758-1767

    • NAID

      120007139197

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] High-throughput enhancer trap by remobilization of transposon Minos in Ciona intestinalis2007

    • Author(s)
      Awazu, S.
    • Journal Title

      genesis 45 (in press)

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Culture of Ciona intestinalis in closed systems2007

    • Author(s)
      Joly, J.-S.
    • Journal Title

      Developmental Dynamics 236 (in press)

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Postplasmic/PEM RNAs : a class of localized maternal mRNAs with multiple roles in cell polarity nd development in ascidian embryos2007

    • Author(s)
      Francois Prodon
    • Journal Title

      Developmental Dynamics (in press)

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Germline transgenesis and insertional mutagenesis in the ascidian Ciona intestinalis2007

    • Author(s)
      Yasunori Sasakura
    • Journal Title

      Developmental Dynamics (in press)

    • NAID

      120007139197

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Urochordate Genomes2006

    • Author(s)
      Satoh, N., Kawashima, T., Shoguchi, E., Satou, Y
    • Journal Title

      Vertebrate Genomes, Volff, J-N (ed), Karger, Basal

      Pages: 198-212

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Transposon-mediated insertional mutagenesis revealed the functions of animal cellulose synthase in the ascidian Ciona intestinalis2005

    • Author(s)
      Sasakura, Y., et. al.
    • Journal Title

      Proc. Natl. Acad. Sci., USA 102

      Pages: 15134-15139

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Germline transgenesis of the ascidian Ciona intestinalis2005

    • Author(s)
      Matsuoka, T., et. al.
    • Journal Title

      genesis 41

      Pages: 67-72

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] J-i, and Satoh, N. Transposon-mediated insertional mutagenesis revealed the functions of animal cellulose synthase in the ascidian Ciona intestinalis2005

    • Author(s)
      Sasakura, Y., Nakashima, K., Awazu, S., Matsuoka, T., Nakayama, A., Azuma
    • Journal Title

      Proc. Natl. Acad. Sci., USA 102

      Pages: 15134-15139

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Germline transgenesis of the ascidian Ciona intestinalis2005

    • Author(s)
      Matsuoka, T., Awazu, S., Shoguchi, E., Satoh, N., Sasakura, Y
    • Journal Title

      Genesis 41

      Pages: 67-72

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Transposon-mediated insertional mutagenesis revealed the functions of animal cellulose synthase in the ascidian, Ciona intestinalis2005

    • Author(s)
      Sasakura, Y.
    • Journal Title

      Proc.Natl.Acad.Sci.USA 102

      Pages: 15134-15139

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Germline transgenesis of the ascidian Ciona intestinalis by electroporation2005

    • Author(s)
      Matsuoka, T.
    • Journal Title

      Genesis 41

      Pages: 67-72

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Tissue-specific profile of DNA replication in the swimming larvae of Ciona intestinalis2005

    • Author(s)
      Nakayama, A.
    • Journal Title

      Zool.Sci. 22

      Pages: 301-309

    • Related Report
      2005 Annual Research Report
  • [Presentation] Different pathways initiating ascidian metamorphic events revealed by mutant analyses2007

    • Author(s)
      Sasakura, Y.
    • Organizer
      4th International Tunicate Meeting
    • Place of Presentation
      Villefranche-sur-Mer, France
    • Year and Date
      2007-06-27
    • Related Report
      2007 Annual Research Report
  • [Presentation] 30 years of ascidian research and future perspectives2007

    • Author(s)
      Satoh, N.
    • Organizer
      4th International Tunicate Meeting
    • Place of Presentation
      Villefranche-sur-Mer, France
    • Year and Date
      2007-06-23
    • Related Report
      2007 Annual Research Report
  • [Presentation] Analyses of Ciona intestinalis mutant, balloon, revealed a novel function of Alpha-2-macroglobulin2007

    • Author(s)
      Matsuoka, T., et. al.
    • Organizer
      4th International Tunicate Meeting
    • Place of Presentation
      Villefranche, France
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Different pathways initiating ascidian metamorphic events revealed by mutant analyses2007

    • Author(s)
      Sasakura, Y., et. al.
    • Organizer
      4th International Tunicate Meeting
    • Place of Presentation
      Villefranche, France
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Different Pathways initiating ascidian metamorphic events revealed by mutant analyses2007

    • Author(s)
      Sasakura, Y., Nakayama, A., Satoh, N
    • Organizer
      4th International Tunicate Meeting
    • Place of Presentation
      Villefranche, France
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Transposon-mediated mutagenesis reveals the function of Alpha-2-macroglobulin in Ciona intestinalis2006

    • Author(s)
      松岡輝実, 他
    • Organizer
      日本発生生物学会第39回大会
    • Place of Presentation
      広島
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Developmental genomics of Ciona intestinalis2006

    • Author(s)
      Satoh, N.
    • Organizer
      Marine Genomics: an International Conference
    • Place of Presentation
      Sorrento, Italy
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Transposon-mediated mutagenesis reveals the function of Alpha-2-macroglobulin in Ciona intestinalis2006

    • Author(s)
      Matsuoka, T., Awazu, S., Inaba, K., Satoh, N., Sasakura, Y
    • Organizer
      39th Annual Meeting of the Japanese Society of Developmental Biologists
    • Place of Presentation
      Hiroshima, Japan
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Developmental genomics of Ciona intestinalis2006

    • Author(s)
      Satoh, N
    • Organizer
      Marine Genomics : an International Conference
    • Place of Presentation
      Sorrento, Italy
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Germ-line transgenesis and insertional mutagenesis of Ciona intestinalis with Minos transposon2005

    • Author(s)
      Sasakura, Y., et. al.
    • Organizer
      3rd International Tunicate Conference
    • Place of Presentation
      University of California, USA
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Book] Urochordate Genomes. In Vertebrate Genomes, Volff, J-N(ed)2006

    • Author(s)
      Satoh, N., et. al.
    • Publisher
      Karger, Basal
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary

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Published: 2005-04-01   Modified: 2016-04-21  

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