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Studies on the Mechanism of Constructing Molecular Skeletons of Bioactive Polyether Metabolites

Research Project

Project/Area Number 17208010
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Bioproduction chemistry/Bioorganic chemistry
Research InstitutionHokkaido University

Principal Investigator

OIKAWA Hideaki  Hokkaido University, Faculty of Scienee, Professor (00185175)

Co-Investigator(Kenkyū-buntansha) OGURI Hiroki  Hokkaido University, Faculty of Science, Associate Prof. (80311546)
TOKIWANO Tetsuo  Hokkaido University, Faculty of Science, Assistant Prof. (50312343)
Project Period (FY) 2005 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥49,660,000 (Direct Cost: ¥38,200,000、Indirect Cost: ¥11,460,000)
Fiscal Year 2007: ¥8,320,000 (Direct Cost: ¥6,400,000、Indirect Cost: ¥1,920,000)
Fiscal Year 2006: ¥8,320,000 (Direct Cost: ¥6,400,000、Indirect Cost: ¥1,920,000)
Fiscal Year 2005: ¥33,020,000 (Direct Cost: ¥25,400,000、Indirect Cost: ¥7,620,000)
Keywordspolyethers / biosynthesis / polyketides / cyclase / epoxidase
Research Abstract

Naturally occurring polyether metabolites show a broad range of biological activities and have been isolated from a number of organisms including soil bacteria (ionophore antibiotics), marine dinoflagelate (ladder polyether toxins), marine algae (triterpenes) and annonaceae plants (antitumor acetogenins). In the biosynthesis of polyether metabolites, it is proposed that a polyene precursor is stereoselectively epoxidized and then the subsequent sequential ring openings would afford polyether skeleton. This insightful hypothesis was supported by feeding experiments with isotopically labeled precursors in the biosynthesis of ionophore antibiotics. Recent genetic studies on monensin biosynththesis provided further supports for this hypothesis. Although enormous efforts to prove this hypothesis have been made, direct evidence on these enzymatic transformations has not been obtained. In this project, detailed biosynthetic studies on lasalocid A, an anticoccidium agent from Stretomyces lasaliensis, has carried out to elucidate the enzymatic construction of polyether skeleton.
At first, we have succeeded identification of lasalocid biosynthetic gene cluster spanning 82 kb, and have also developed the stereocontroled synthesis of prelasalocid and its epoxide, which are plausible biosynthetic precursors of lasalocid. The most interesting feature in the polyether formation of lasalocid is an energetically disfavored 6-endo selective cyclization. Our efforts on enzymatic conversions of plausible biosynthetic precursors with the enzymes Lsd18 and Lsd19 overexpressed in Escherichia coli unambiguously showed that complex molecular skeleton of lasalocid is constructed by a sequencial ring opening of the corresponding epoxides with a single epoxide hydrolase Lsd19. This is the first example of the enzymatic formation of polyether skeleton.

Report

(4 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • 2005 Annual Research Report
  • Research Products

    (49 results)

All 2008 2007 2006 2005

All Journal Article (33 results) (of which Peer Reviewed: 13 results) Presentation (14 results) Book (2 results)

  • [Journal Article] Stereo-controlled synthpsis of prelasalocid, a key precursor proposed in the biosynthesis of polyether antibiotic lasalocid A.2008

    • Author(s)
      Hideaki, Oikawa, et. al.
    • Journal Title

      Tetrahedron Letters 49

      Pages: 1021-1025

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] 2-Methylisoborneol: Identification and functional analysis of genes controlling biosynthesis2008

    • Author(s)
      Hideaki, Oikawa, et. al.
    • Journal Title

      Proc. Natl. acad. Sci. U. S. A. 105(In press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Stereo-controlled synthesis of prelasalocid, a key precursor proposed in the biosynthesis of polyether antibiotic lasalocid A2008

    • Author(s)
      H. Oikawa, et al.
    • Journal Title

      Tetrahedron Lett. 49(6)

      Pages: 1021-1025

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] 2-Methylisoborneol: Identification and functional analysis of genes controlling biosynthesis2008

    • Author(s)
      H. Oikawa, et al.
    • Journal Title

      Proc. Natl. Acad. Sci. U.S.A. (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Stereo-controlled synthesis of prelasalocid, a key precursor proposed in the biosynthesis of polyether antibiotic lasalocid A.2008

    • Author(s)
      Hideaki Oikawa, et. al.
    • Journal Title

      Tetrahedron Letters 49

      Pages: 1021-1025

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 2-Methylisoborneol: Identification and functional analysis of genes controlling biosynthesis2008

    • Author(s)
      Hideaki Oikawa, et. al.
    • Journal Title

      Proc. Natl. acad. Sci. U. S. A. 105(In press)

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Active site mutagenesis of the putative Diels-Alderase macrophomate synthase2007

    • Author(s)
      Hideaki, Oikawa, et. al.
    • Journal Title

      Chem. Commun.

      Pages: 1701-1703

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Characterization of a Rice Gene Family Encording Type-A Diterpene Cyclases2007

    • Author(s)
      Hideaki, Oikawa, et. al.
    • Journal Title

      Bioscience Biotechnology and Biochemistry

      Pages: 1701-1703

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Active site mutagenesis of the putative Diels-Alderase macrophomate synthase2007

    • Author(s)
      H. Oikawa, et al.
    • Journal Title

      Chem. Commun. (17)

      Pages: 1701-1703

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Active site mutagenesis of the putative Diels-Alderase macrophomate synthase2007

    • Author(s)
      Hideaki Oikawa, et. al.
    • Journal Title

      Chem. Commun.

      Pages: 1701-1703

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Relative and absolute configuration of antitumor agent SW-163D2007

    • Author(s)
      Hideaki Oikawa, et. al.
    • Journal Title

      Bioscience Biotechnology and Biochemistry 71

      Pages: 1701-1703

    • NAID

      10027521978

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Biosynthetic Study of FR-900848 : Unusual Observation on Polyketide Biosythesis that Did not Accept Acetate as Origin of Acetul-CoA2006

    • Author(s)
      Hideaki, Oikawa, et. al.
    • Journal Title

      Tetrahedron Letters 46

      Pages: 5885-5888

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Biosynthetic Study of FR-900848 : Unsusual Observation on Polyketide Biosynthesis that Did not Accept Acetate as Origin of Acetyl-CoA2006

    • Author(s)
      H. Oikawa, et al.
    • Journal Title

      Tetrahedron Lett. 47(9)

      Pages: 1399-1402

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Characterization of a Rice Gene Family Encoding Type-A Diterpene Cyclases2006

    • Author(s)
      H. Oikawa, et al.
    • Journal Title

      Biosci. Biotechnol. Biochem. 70(7)

      Pages: 1702-1710

    • NAID

      10018529282

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Total biosynthesis of antitumor nonribosomal peptides in Escherichia coli2006

    • Author(s)
      Watanabe, K.
    • Journal Title

      Nat. Chem. Biol. 2(8)

      Pages: 423-428

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Biosynthetic Study of FR-900848 : Unusual Observation on Polyketide Biosythesis that Did Not Accept Acetate as Origin of Acetyl-CoA2006

    • Author(s)
      Watanabe, K.
    • Journal Title

      Tetrahedron Lett. 47(9)

      Pages: 1399-1402

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Identification and Stereochemical Assignment of the -Hydroxytryptophan Intermediate in the Echinomycin Biosynthetic Pathway2006

    • Author(s)
      Koketsu, K.
    • Journal Title

      Org. Lett. 8(21)

      Pages: 4719-4722

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Expression of Alternaria solani PKSF Generates a Set of Complex Reduced-Type Polyketides with Different Carbon-Lengths and Cyclization2006

    • Author(s)
      Kasahara, K.
    • Journal Title

      ChemBioChem 7

      Pages: 920-924

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Characterization of a Rice Gene Family Encoding Type-A Diterpene Cyclases2006

    • Author(s)
      Kanno, Y.
    • Journal Title

      Biosci. Biotechnol. Biochem. 70(7)

      Pages: 1702-1710

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Biosynthetic Study of FR-900848 : Unusual Observation on Polyketide Biosythesis that Did not Accept Acetate as Origin of Acetyl-CoA2006

    • Author(s)
      Hideki Oikawa et al.
    • Journal Title

      Tetrahedron Letters 46

      Pages: 5885-5888

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Characterization of a Rice Gene Family Encording Type-A Diterpene Cyclases2006

    • Author(s)
      Hideaki Oikawa et al.
    • Journal Title

      Bioscience Biotechnology and Biochemistry (in press)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Proposed mechanism for diterpene synthases in the formation of Phomactatriene and taxadiene2005

    • Author(s)
      Hideaki, Oikawa, et. al.
    • Journal Title

      Organic and Biomolecular Chemistry 3

      Pages: 2713-2722

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Involvernent of the Diels-Alderases in the biosynthesis of natural products2005

    • Author(s)
      Hideaki, Oikawa
    • Journal Title

      Bulletin of the Chemical Society of Japan 78

      Pages: 537-554

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Biosynthetic Studies on the Antibiotics PF1140:A Nevel Pathway for a 2-Pyridone Framework2005

    • Author(s)
      Hideaki, Oikawa, et. al.
    • Journal Title

      Tetrahedron Letters 46

      Pages: 5885-5888

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] The Relative and Absolute Configuration of PF11402005

    • Author(s)
      Hideaki, Oikawa, et. al.
    • Journal Title

      The Journal of Antibiotics 58

      Pages: 425-427

    • NAID

      10016458154

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Proposed mechanism for diterpene synthases in the formation of phomactatriene and taxadiene2005

    • Author(s)
      H. Oikawa, et al.
    • Journal Title

      Org. Biomol. Chem. 3(15)

      Pages: 2713-2722

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Involvement of the Diels-Alderases in the biosynthesis of natural products2005

    • Author(s)
      H. Oikawa, et al.
    • Journal Title

      Bull. Chem. Soc. Jpn. 78(4)

      Pages: 537-554

    • NAID

      10015462879

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Biosynthetic Studies on the Antibiotics PF1140: A Novel Pathway for a 2-Pyridone Framework2005

    • Author(s)
      H. Oikawa, et al.
    • Journal Title

      Tetrahedron Lett. 46(35)

      Pages: 5885-5888

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] The Relative and Absolute Configuration of PF11402005

    • Author(s)
      H. Oikawa, et al.
    • Journal Title

      J. Antibiot. 58(6)

      Pages: 425-427

    • NAID

      10016458154

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Proposed mechanism for diterpene synthases in the formation of Phomactatriene and taxadiene2005

    • Author(s)
      Hideaki Oikawa et al.
    • Journal Title

      Organic and Biomolecular Chemistry 3(15)

      Pages: 2713-2722

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Involvement of the Diels-Alderases in the biosynthesis of natural products2005

    • Author(s)
      Hideaki Oikawa et al.
    • Journal Title

      Bulletin of the Chemical Society of Japan 78(4)

      Pages: 537-554

    • NAID

      10015462879

    • Related Report
      2005 Annual Research Report
  • [Journal Article] The Relative and Absolute Configuration of PF11402005

    • Author(s)
      Hideaki Oikawa et al.
    • Journal Title

      The Journal of Antibiotics 58(6)

      Pages: 425-427

    • NAID

      10016458154

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Biosynthetic Studies on the Antibiotics PF1140: A Novel Pathway for a 2-Pyridone Framework2005

    • Author(s)
      Hideaki Oikawa et al.
    • Journal Title

      Tetrahedron Letters 46(35)

      Pages: 5885-5888

    • Related Report
      2005 Annual Research Report
  • [Presentation] Biosynthetic Studies on Polyether Antibiotics and Peptide Antitumor Agents2008

    • Author(s)
      H., Oikawa
    • Organizer
      The Nakanishi Symposium on Natural Products and Bioorganic Chemistry 2008.
    • Place of Presentation
      Tokyo
    • Year and Date
      2008-05-27
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Annual Research Report 2007 Final Research Report Summary
  • [Presentation] ポリエーテル系抗生物質lasalocidの酵素的ポリエーテル環構築機構2008

    • Author(s)
      七條, 好宏・右田, 章・大栗, 博毅・渡部, 万美・常盤野, 哲生・渡辺, 賢二・及川, 英秋
    • Organizer
      日本化学会第88春季年会
    • Place of Presentation
      東京
    • Year and Date
      2008-03-28
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Annual Research Report 2007 Final Research Report Summary
  • [Presentation] Biosynthetic Studies on Polyether Antibiotics and Peptide Antitumor Agents2008

    • Author(s)
      H. Oikawa
    • Organizer
      The Nakanishi Symposium on Natural Products & Bioorganic Chemistry
    • Place of Presentation
      Tokyo
    • Year and Date
      2008-03-27
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] 推定生合成経路に基づいたポリエーテル系抗生物質イソラサロシドの全合成2007

    • Author(s)
      七條, 好宏・右田, 章・渡部, 万美・大栗, 博毅・常盤野, 哲生・及川, 英秋
    • Organizer
      日本化学会北海道支部2007年夏期研究発表会
    • Place of Presentation
      旭川
    • Year and Date
      2007-07-20
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] ポリエーテル系抗生物質ラサロシドの生合成研究 (第4報)2007

    • Author(s)
      右田, 章・渡部, 万美・七條, 好宏・纐纈, 健人・廣瀬, 雄己・常盤野, 哲生・大栗, 博毅・及川, 英秋
    • Organizer
      日本化学会第87春季年会
    • Place of Presentation
      大阪
    • Year and Date
      2007-03-26
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] 放線菌線状プラスミド上のポリケタイド生合成遺伝子クラスター2007

    • Author(s)
      津田, 宗哉・右田, 章・纐纈, 健人・常盤野, 哲生・渡辺, 賢二・木梨, 陽康・池田, 治生・及川, 英秋
    • Organizer
      日本化学会第87春季年会
    • Place of Presentation
      大阪
    • Year and Date
      2007-03-26
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] ポリエーテル系抗生物質ラサロシドの生合成研究2006

    • Author(s)
      右田, 章・大栗, 博毅・常盤野, 哲生・渡部, 万美・七條, 好宏・廣瀬, 雄己・渡辺, 賢二・木梨, 陽康・及川, 英秋
    • Organizer
      第48回天然有機化合物討論会
    • Place of Presentation
      仙台
    • Year and Date
      2006-10-14
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Biosynthetic Studies of Two Bioactive Metabolites from Streptomyces Toward Engineered Biosynthesis2006

    • Author(s)
      H., Oikawa
    • Organizer
      ICOB-5 & ISCNP-25 IUPAC International Conference on Biodiversity and Natural Products
    • Place of Presentation
      Kyoto
    • Year and Date
      2006-07-27
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Biosynthetic Study of Polyether Antibiotic Lasalocid2006

    • Author(s)
      Akira, Migita・Mami, Watanabe・Yoshihiro, Shichijo・Tetsuo, Tokiwano・Hiroki, Oguri・Hideaki, Oikawa:
    • Organizer
      ICOB-5 & ISCNP-25 IUPAC International Conference on Biodiversity and Natural Products
    • Place of Presentation
      Kyoto
    • Year and Date
      2006-07-24
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] ポリエーテル系抗生物質ラサロシドの生合成研究2006

    • Author(s)
      右田, 章・七條, 好宏・渡部, 万美・常盤野, 哲生・大栗, 博毅・及川, 英秋
    • Organizer
      日本化学会堂86春季年会
    • Place of Presentation
      船橋
    • Year and Date
      2006-03-27
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Biosynthetic Studies of Bioactive Metabolites from Streptomyces Toward Engineered Biosynthesis2006

    • Author(s)
      H., Oikawa
    • Organizer
      1st International Conference on Cutting-Edge Organic Chemistry In Asia
    • Place of Presentation
      Okinawa
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Reaction Mechanism of Enzymes Constructing Molecular Skeletons in the Biosynthesis of Natural Products2005

    • Author(s)
      H. Oikawa
    • Organizer
      Pacifichem2005
    • Place of Presentation
      Honolulu
    • Year and Date
      2005-12-17
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Biosynthetic Studies of Bioactive Metabolites from Streptomyces Toward Engineered Biosynthesis2005

    • Author(s)
      H. Oikawa
    • Organizer
      East Asian Marine Bioscience Symposium---the Frontier of Chemical Biology
    • Place of Presentation
      Sapporo
    • Year and Date
      2005-12-01
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] ポリペプチド、ポリエーテル型天然物生合成における骨格構築機構の解析2005

    • Author(s)
      及川, 英秋
    • Organizer
      天然物科学研究会第二回講演会
    • Place of Presentation
      東京
    • Year and Date
      2005-11-25
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Book] 天然物化学 -植物編- 第4章二次代謝産物の生合成 4.1節 キノー、セスキー、ジテルペン (分筆担当)2007

    • Author(s)
      及川, 英秋・常盤野, 哲生
    • Total Pages
      10
    • Publisher
      株式会社アイピーシー
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Book] 天然物化学-植物編-2007

    • Author(s)
      山村庄亮
    • Total Pages
      428
    • Publisher
      アイピーシー
    • Related Report
      2006 Annual Research Report

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Published: 2005-04-01   Modified: 2016-04-21  

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