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Time series modeling of non-invasive measurement of brain functioning

Research Project

Project/Area Number 17300092
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Statistical science
Research InstitutionInstitute of Statistical Mathematics

Principal Investigator

OZAKI Tohru  ISM, Dept.Statistical Modeling, Professor, モデリング研究系, 教授 (00000208)

Co-Investigator(Kenkyū-buntansha) SADATOU Norihiro  IISP, Division of Cerebral Integration, Professor, 大脳皮質機能研究系, 教授 (00273003)
Project Period (FY) 2005 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥13,600,000 (Direct Cost: ¥13,600,000)
Fiscal Year 2006: ¥6,600,000 (Direct Cost: ¥6,600,000)
Fiscal Year 2005: ¥7,000,000 (Direct Cost: ¥7,000,000)
KeywordsfMRI modeling / spatial time series model / hemodyanmics / innovation approach / EEG modeling / inverse problem / dynamic inverse problem / space-time Kalman filter / イノヴェーションアプロー / イノヴェーションアプローチ
Research Abstract

In the present project we have developed a ToolBox for fMRI Connectivity Analysis. Here we employ NN-ARX model which we developed in our previous JSPS project. We use the model to whiten the 140,000 dimensional fMRI time series into 140,000 dimensional innovation series. Here all the obvious correlations between the neighboring voxels and the activated voxels by the stimulus are removed by the whitening. We proved that it can be effectively used for discovering dynamic connectivity between remaining remote voxels. The test version of the toolbox has been already used by our collaborators in National Institute of Physiological Science and Tohoku University Medical School for a few experimental data of fMRI. A method for estimating the dynamic causality between a few voxels is also implemented in the toolbox.
We also developed a statistical method for decomposing the EEG/MEG data into component signals by using state space modeling techniques. Advantage over non-dynamic signal decomposition method such as ICA is confirmed.

Report

(3 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • Research Products

    (37 results)

All 2007 2006 2005

All Journal Article (37 results)

  • [Journal Article] Spatio-temporal correlations in fMRI time series : the whitening approach2007

    • Author(s)
      Bosch-Bayard J., Riera-Diaz J., Biscay-Lirio R.J., Wong K.F.K., Yamashita O., Galka A., Sadato N., Kawashima R., Valdes-Sosa P., Miwakeichi F., Ozaki T.
    • Journal Title

      Research Memorandum ISM 1025

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Spatio-temporal correlations in fMRI time series : the whitening approach2007

    • Author(s)
      Bosch-Bayard J., Riera-Diaz J., Biscay-Lirio R.J., Wong K.F.K., Yamashita O., Galka A., Sadato N., Kawashima R., Valdes-Sosa P., Miwakeichi F., Ozaki T.
    • Journal Title

      Research Memorandum, Institute of Statistical Mathematics No.1025

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Spatio-temporal correlations in fMRI time series : the whitening approach2007

    • Author(s)
      Bosch-Bayard J., Riera-Diaz J., Biscay-Lirio R.J., Wong K.F.K., Yamashita O., Galka A., Sadato N., Kawashima R., Baldes-Sosa P., Miwakeichi F., Ozaki T.
    • Journal Title

      Research Memorandum ISM 1025

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Modelling non-stationary variance in EEG time series by state space GARCH model2006

    • Author(s)
      Wong, K.F., Galka, A., Yamashita, O, Ozaki
    • Journal Title

      Computers in Biology and Medicine 136

      Pages: 1327-1335

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Whitening as a Tool for Estimating Mutual Information in Spatiotemporal Data Sets2006

    • Author(s)
      Galka A., Ozaki, T., Bosch Bayard, J., Yamashita, O.
    • Journal Title

      J. of Statist. Physics 124

      Pages: 1275-1315

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Identification of source components in multivariate time series by state space modeling2006

    • Author(s)
      Galka A., Wong K., Stephani U., Muhle H., Ozaki T.
    • Journal Title

      Research Memorandum ISM 981

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Akaike causality in state space. Part I - Instantaneous causality between visual cortex in fMRI time series2006

    • Author(s)
      Wong K., Ozaki T.
    • Journal Title

      Research Memorandum ISM 1018

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Local Linearization-Runge Kutta (LLRK) Methods for Solving Ordinary Differential Equations.2006

    • Author(s)
      H.De la Cruz, R.J.Biscay, F.M.Carbonell, J.C.Jimenez, T.Ozaki
    • Journal Title

      Lecture Notes in Computer Sciences 3991

      Pages: 132-139

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Measurement of brain function and time series analysis2006

    • Author(s)
      Ozaki T.
    • Journal Title

      Brain 21 (in Japanese) 9

      Pages: 255-229

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Higher order Local Linearization methods for solving stochastic differential equations with additive noise.2006

    • Author(s)
      De la Cruz H., Biscay, R.J., Carbonell, F., Ozaki, T., Jimenez, J.C.
    • Journal Title

      Research Memorandum, ISM 1011

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Inference methods for discretely observed continuous-time stochastic volatility models : A commented overview2006

    • Author(s)
      J.C.Jimenez, R.J.Biscay, T.Ozak
    • Journal Title

      Asia-Pacific Financial Markets 12

      Pages: 109-141

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Modeling non-stationary variance in EEG time series by state space GARCH model2006

    • Author(s)
      Wong, K.F., Galka, A., Yamashita, O, Ozaki T.
    • Journal Title

      Computers in Biology and Medicine vo136

      Pages: 1327-1335

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Whitening as a Tool for Estimating Mutual Information in Spatiotemporal Data Sets2006

    • Author(s)
      Galka A., Ozaki, T., Bosch Bayard, J., Yamashita, 0.
    • Journal Title

      J.of Statist.Physics vol.124, no.5

      Pages: 1275-1315

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Identification of source components in multivariate time series by state space modeling2006

    • Author(s)
      Galka A., Wong K., Stephani U., Muhle H., Ozaki T.
    • Journal Title

      Research Memorandum, Institute of Statistical Mathematics No.981

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Akaike causality in state space. Part I-Instantaneous causality between visual cortex in fMRI time series.2006

    • Author(s)
      Wong K., Ozaki T.
    • Journal Title

      Research Memorandum, Institute of Statistical Mathematics No.1018

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Local Linearization-Runge Kutta (LLRK) Methods for Solving Ordinary Differential Equations.2006

    • Author(s)
      H.De la Cruz, R.J.Biscay, F.M.Carbonell, J.C.Jimenez, T.Ozaki
    • Journal Title

      Lecture Notes in Computer Sciences(Springer-Verlag : Berlin Heidelberg) 3991

      Pages: 132-139

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Measurement of brain function and time series analysis2006

    • Author(s)
      T.Ozaki
    • Journal Title

      Brain(in Japanese) 21 vol.9, No.3

      Pages: 255-259

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Higher order Local Linearization methods for solving stochastic differential equations with additive noise.2006

    • Author(s)
      De la Cruz H., Biscay, R.J., Carbonell, F., Ozaki, T., Jimenez, J.C.
    • Journal Title

      Research Memorandum, Institute of Statistical Mathematics No.1011

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Inference methods for discretely observed continuous-time stochastic volatility models : A commented overview2006

    • Author(s)
      J.C.Jimenez, R.J.Biscay, T.Ozaki
    • Journal Title

      Asia-Pacific Financial Markets 12

      Pages: 109-141

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Modelling non-statinary variance in EEF time series by state space GARCH model2006

    • Author(s)
      Wong, K.F., Galka, A., Yamashita, O, Ozaki
    • Journal Title

      Computers in Biology and Medicine 136

      Pages: 1327-1335

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Measurement of brain function and time series analysis2006

    • Author(s)
      Ozaki T.
    • Journal Title

      Brain 21(in Japanese) 9

      Pages: 255-229

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Nonlinear Local Electro-Vascular Coupling. Part II : From Data To Neuronal Masses2006

    • Author(s)
      Riera, J.J., Jimenez, J.C., Wan, X., Kawashima, R., Ozaki, T.
    • Journal Title

      Human Brain Mapping (in press)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Modelling non-stationary variance in EEG time series by state space GARCH model2006

    • Author(s)
      tong, K.F., Galka, A., Yamanshita, O., Ozaki, T.
    • Journal Title

      Computers in Biology and Medicine (in press)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Evaluating frequency-wise directed connectivity of BOLD signals applying relative power contribution with the linear multivariate time series models2005

    • Author(s)
      Galka A., Ozaki, T., Bosch Bayard, J., Yamashita, O.
    • Journal Title

      Neuroimage 25

      Pages: 478-490

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] An approximate innovation method for the estimation of diffusion processes from discrete data2005

    • Author(s)
      Jimenez, J.C., Ozaki, T.
    • Journal Title

      J. Time Series Analysis 27

      Pages: 77-97

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Fusing EEG and fMRI based on a bottom-up model : inferring activation and effective connectivity in neural masses2005

    • Author(s)
      Riera, J., Aubert, E., Iwata, K., Kawashima R., Wan, X., Ozaki, T.
    • Journal Title

      Phil. Trans. of Royal Society 360

      Pages: 1025-1041

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Nonlinear Local Electro-Vascular Coupling. Part II : From data to neuronal masses.2005

    • Author(s)
      Riera J.J., Jimenez J.C., Wan X., Kawashima R., Ozaki T.
    • Journal Title

      Research Memorandum, ISM 964

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Artifact reduction for EEG/fMRI recording part 1 : nonlinear reduction of ballistocardiogram artifact.2005

    • Author(s)
      Wan X., Iwata K., Riera J., Ozaki T., Kitamura M., Kawashima R
    • Journal Title

      Research Memorandum, ISM 939

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Evaluating frequency-wise directed connectivity of BOLD signals applying relative power contribution with the linear multivariate time series models2005

    • Author(s)
      Yamashita, O., Sadato, N., Okada, T., Ozaki, T.
    • Journal Title

      Neuroimage vol.25

      Pages: 478-490

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] An approximate innovation method for the estimation of diffusion processes from discrete data2005

    • Author(s)
      Jimenez, J.C., Ozaki, T.
    • Journal Title

      J.Time Series Analysis Vol.27

      Pages: 77-97

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Fusing EEG and fMRI based on a bottom-up model : inferring activation and effective connectivity in neural masses2005

    • Author(s)
      Riera, J., Aubert, E., Iwata, K., Kawashima R., Wan, X., Ozaki, T.
    • Journal Title

      Phil.Trans.of Royal Society, Biological Sciences vol.360, no.1457

      Pages: 1025-1041

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Nonlinear Local Electro-Vascular Coupling. Part II : From data to neuronal masses.2005

    • Author(s)
      Riera J.J., Jimenez J.C., Wan X., Kawashima R., Ozaki T.
    • Journal Title

      Research Memorandum, Institute of Statistical Mathematics No.964

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Artifact reduction for EEG/fMRI recording part 1 : nonlinear reduction of ballistocardiogram artifact.2005

    • Author(s)
      Wan X., Iwata K., Riera J., Ozaki T., Kitamura M., Kawashima R.
    • Journal Title

      Research Memorandum, Institute of Statistical Mathematics No.939

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Fusing EEG and fMRI based on a bottom-up model : inferring activation and effective connectivity in neural masses2005

    • Author(s)
      Riera, J., Aubert, E., Iwata, K., Kawashima, R., Wan, X., Ozaki, T.
    • Journal Title

      Phil.Trans.Of Royal Society, Biological Sciences v.360・1457

      Pages: 1025-1041

    • Related Report
      2005 Annual Research Report
  • [Journal Article] An approximate innovation method for the estimation of diffusion processes from discrete data2005

    • Author(s)
      Jimenez, J.C., Ozaki, T.
    • Journal Title

      J.Time Series Analysis 27

      Pages: 77-97

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Inference methods for discretely observed by continuous-time stochastic volatility models : A commented overview2005

    • Author(s)
      Jimenez, J.C., Biscay, R., Ozaki, T.
    • Journal Title

      AFEE Journal (in press)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Evaluating frequency-wise directed connectivity of BOLD signals applying relative power contribution with the linear multivariate time series models2005

    • Author(s)
      Yamashita, O., Sadato, H., Okada, T., Ozaki, T.
    • Journal Title

      Neuroimage 25

      Pages: 478-490

    • Related Report
      2005 Annual Research Report

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Published: 2005-04-01   Modified: 2016-04-21  

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