• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Molecular mechanism of prion propagation revealed by yeast prion as a model

Research Project

Project/Area Number 17370034
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Structural biochemistry
Research InstitutionThe University of Tokyo

Principal Investigator

TAGUCHI Hideki  The University of Tokyo, Graduate School of Frontier Sciences, Associate Professor (40272710)

Project Period (FY) 2005 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥15,760,000 (Direct Cost: ¥14,500,000、Indirect Cost: ¥1,260,000)
Fiscal Year 2007: ¥5,460,000 (Direct Cost: ¥4,200,000、Indirect Cost: ¥1,260,000)
Fiscal Year 2006: ¥4,600,000 (Direct Cost: ¥4,600,000)
Fiscal Year 2005: ¥5,700,000 (Direct Cost: ¥5,700,000)
Keywordsprion / protein folding / chaperones / Saccharomyces cerevisiae / amyloid / protein / protein aggregation / 酵母 / 1分子 / 凝集 / フォールデイング / Saccaromyces cerevisiae
Research Abstract

Prions are infectious proteins; an abnormal form of the prion protein causes an auto-catalytic conversion of a normal (soluble) form of prion protein, which has the same primary structure as the abnormal one, to the abnormal insoluble form, and results in accumulation of infectious insoluble prion particles. In many cases, the particles are observed as amyloid fiber-like structures, which are called ‘prion-fibrils'. This concept originated from the studies of mammalian neurodegenerative diseases, but spread to include other proteinous genetic elements from yeast Saccharomyces cerevisiae. In particular, the prion-inducing fragment of yeast Sup35, a determinant of the yeast prion-like [PSI^+], is comprised of a glutamine/asparagine-rich N-terminal and medium domains of Sup35, and is a valuable model protein for studying the mechanism of prion-fiber formation.
Using the yeast prion as a model, we have previously developed a system to observe the growth of individual prion fibrils directly. … More As a first objective in this study, we have further expanded the imaging using total internal reflection fluorescent microscopy (TIRFM). By using the TIRFM system, we succeeded in monitoring live imaging of individual Sup35 fibrils elongation. Statistical analysis of rate of the fibril growth provides the kinetic information, and then a novel insight into the mechanism of fibril growth.
Second, we directly monitored the dynamics of the aggregates in living cells using an on-chip single-cell cultivation system as well as fluorescence correlation spectroscopy (FCS). Single-cell imaging revealed that the visible foci of yeast prion Sup35 fused with GFP are dispersed throughout the cytoplasm during cell growth, but retain the prion phenotype. FCS showed that [PSI^+] cells, irrespective of the presence of foci, contain diffuse oligomers, which are transmitted to their daughter cells. Single-cell observations of the oligomer-based transmission provide a link between previous in vivo and in vitro analyses of the prion and shed light on the relationship between the protein conformation and the phenotype. Less

Report

(4 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • 2005 Annual Research Report
  • Research Products

    (33 results)

All 2009 2008 2007 2006

All Journal Article (19 results) (of which Peer Reviewed: 10 results) Presentation (10 results) Book (4 results)

  • [Journal Article] Bimodal protein solubility distribution revealed by an aggregation analysis of the entire ensemble of Escherichia coli proteins2009

    • Author(s)
      Niwa, T., Ying, B. -W., Saito, K, Jin, W. Z., Takada, S., Ueda, T. Taguchi, H.
    • Journal Title

      Proc. Natl. Acad. Sci. U.S.A. (印刷中)(掲載確定)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Cryo-EM structure of the native GroEL-GroES complex from Thermus thermophilus encapsulating substrate inside the cavity.2009

    • Author(s)
      Kanno, R., Koike-Takeshita, A., Yokoyama, K., Taguchi, H., Mitsuoka, K.
    • Journal Title

      Structure 17

      Pages: 287-293

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Bimodal protein solubility distribution revealed by an aggregation analysis of the entire ensemble of Escherichia coli proteins.2009

    • Author(s)
      Niwa, T., Ying, B. -W., Saito, K., Jin, W. Z., Takada, S., Ueda, T, Taguchi, H.
    • Journal Title

      Proc. Natl. Acad. Sci. U.S.A. (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Kinetic analysis of conformational changes of GroEL based on the fluorescence of tyrosine 506.2008

    • Author(s)
      Hosono, K, Ueno, T., Taguchi, H., Motojima, F, Zako, T., Yoshida, M., Funatsu, T.
    • Journal Title

      Protein J. 27

      Pages: 461-468

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Revisiting the GroEL-GroES reaction cycle via the symmetrical intermediate implied by novel aspects of the GroEL (D398A) mutant.2008

    • Author(s)
      Koike-Takeshita, A., Yoshida, M., Taguchi, H.
    • Journal Title

      Journal of Biological Chemistry 283

      Pages: 23774-23781

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Single molecule imaging of full protein synthesis by immobilized ribosomes.2008

    • Author(s)
      Uemura, S., Iizuka, R., Ueno, T., Shimizu, Y, Taguchi, H., Ueda, T., Puglisi, J., Funatsu, T.
    • Journal Title

      Nucleic Acids Research 36

      Pages: 70-74

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Comparison of refolding activities between nanogel artificial chaperone and GroEL systems2008

    • Author(s)
      Asayama, W., Sawada, S., Taguchi, H., Akiyoshi, K.
    • Journal Title

      Int. J. Biol. Macromol. 42

      Pages: 241-246

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Revisiting the GroEL-GroES reaction cycle via the symmetrical intermediate implied by novel aspects of the GroEL (D398A) mutant.2008

    • Author(s)
      Koike-Takeshita, A., Yoshida, M., Taguchi, H.
    • Journal Title

      J. Biol. Chem. 283

      Pages: 23774-23781

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Comparison of refolding activities between nanogel artificial chaperone and GroEL systems2008

    • Author(s)
      Asayama, W., Sawada, S., Taguchi, H., Akiyoshi, K.
    • Journal Title

      Int. J. Biol. Macromol (掲載確定)

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Filamentous morphology in GroE-depleted Escherichia coli induced by impaired folding of FtsE.2007

    • Author(s)
      Fujiwara, K., Taguchi, H.
    • Journal Title

      Journal of Bacteriology 189

      Pages: 5860-5866

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Filamentous morphology in GroE-depleted Escherichia coli induced by impaired folding of FtsE.2007

    • Author(s)
      Fujiwara, K., Taguchi, H.
    • Journal Title

      J. Bacteriol. 189

      Pages: 5860-5866

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Filamentous morphology in GroE-depleted Escherichia coli induced by impaired folding of FtsE2007

    • Author(s)
      Fujiwara, K. Taguchi, H.
    • Journal Title

      J. Bacteriol 189

      Pages: 5860-5866

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Chaperone properties of mammalian mitochondrial translation factor Tu.2007

    • Author(s)
      Suzuki.H., Ueda, T., Taguchi, H., Takeuchi, N.
    • Journal Title

      Journal of Biological Chemistry 282

      Pages: 4076-4084

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Dynamics of yeast prion aggregates in single living cells.2006

    • Author(s)
      Kawai-Noma, S., Ayano, S., Pack, C-G., Kinjo, M., Yoshida, M., Yasuda, K., Taguchi, H.
    • Journal Title

      Genes to Cells 11

      Pages: 1085-1096

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Co-translational binding of GroEL to nascent polypeptides is followed by post-translational encapsulation by GroES to mediate protein folding.2006

    • Author(s)
      Ying, B. -W. Taguchi, H., Ueda, T.
    • Journal Title

      J. Biol. Chem. 281

      Pages: 21813-21819

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Leu-309 plays a critical role in the encapsulation of substrate protein into the internal cavity of GroEL.2006

    • Author(s)
      Koike-Takeshita, A, Shimamura, T., Yokoyama, K., Yoshida, M., Taguchi, H. J.
    • Journal Title

      Biol. Chem. 281

      Pages: 962-967

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Dynamics of yeast prion aggregates in single living cells.2006

    • Author(s)
      Kawai-Noma, S., Ayano, S., Pack, C-G., Kinjo, M., Yoshida, M., Yasuda, K, Taguchi, H.
    • Journal Title

      Genes to Cells 11

      Pages: 1085-1096

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Dynamics of yeast prion aggregates in single living cells.2006

    • Author(s)
      Kawai-Noma, S., Ayano, S., Pack, C-G., Kinjo, M., Yoshida, M., Yasuda, K., Taguchi, H
    • Journal Title

      Genes to Cells 11

      Pages: 1085-1096

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Co-translational binding of GroEL to nascent polypeptides is followed by post-translational encapsulation by GroES to mediate protein folding2006

    • Author(s)
      Ying, B.-W., Taguchi, H., Ueda, T.
    • Journal Title

      Journal of Biological Chemistry 281

      Pages: 21813-21819

    • Related Report
      2005 Annual Research Report
  • [Presentation] Direct observation of yeast prion dynamics in single living cells2008

    • Author(s)
      Taguchi, H.
    • Organizer
      Cold Spring Harbor meeting on molecular chaperones and heat shock responses
    • Place of Presentation
      Cold Spring Harbor, USA
    • Year and Date
      2008-05-04
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Direct observation of yeast prion Sup35 dynamics in single-living cells2008

    • Author(s)
      Taguchi, Hideki
    • Organizer
      Cold Spring Harbor meeting of Molecular Chaperones and Heat Shock Responses
    • Place of Presentation
      Cold Spring Harbor, USA
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] シャペロニンGroELの反応モデルの改訂と2ストロークモデルの可能性2007

    • Author(s)
      小池 あゆみ、吉田 賢右、田口 英樹
    • Organizer
      日本分子生物学会日本生化学会合同年会
    • Place of Presentation
      横浜
    • Year and Date
      2007-12-13
    • Related Report
      2007 Annual Research Report
  • [Presentation] Role of Chaperonin GroEL on the folding of newly translated polypeptides2007

    • Author(s)
      田口 英樹
    • Organizer
      7th Kias-Soogsil conference on Protein Structure and Folding
    • Place of Presentation
      ソウル
    • Year and Date
      2007-10-05
    • Related Report
      2007 Annual Research Report
  • [Presentation] シャペロニンGroELの細胞内基質蛋白質の解析2007

    • Author(s)
      田口 英樹
    • Organizer
      日本細胞生物学会
    • Place of Presentation
      福岡
    • Year and Date
      2007-06-29
    • Related Report
      2007 Annual Research Report
  • [Presentation] 細胞内での酵母プリオンの増殖および伝搬機構2007

    • Author(s)
      田口 英樹
    • Organizer
      日本蛋白質科学会
    • Place of Presentation
      仙台
    • Year and Date
      2007-05-26
    • Related Report
      2007 Annual Research Report
  • [Presentation] Direct observation of yeast prion dynamics : from a single-molecule to a single-cell approach.2007

    • Author(s)
      Taguchi, H.
    • Organizer
      Cold Spring Harbor meeting on molecular chaperones and heat shock responses
    • Place of Presentation
      Academia Sinica、台湾
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Direct observation of yeast prion dynamics: from a single-molecule to a single-cell approach.2007

    • Author(s)
      Taguchi, Hideki
    • Organizer
      IBC symposium on Structural and biochemical properties of prions and amyloids
    • Place of Presentation
      Academia Sinica 台湾
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Direct observation amyloid fibril growth using total internal reflection fluorescence microscopy.2006

    • Author(s)
      Taguchi, H.
    • Organizer
      Cold Spring Harbor meeting on molecular chaperones and heat shock responses
    • Place of Presentation
      Cold Spring Harbro, USA
    • Year and Date
      2006-05-04
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Direct observation amyloid fibril growth using total internal reflection Fluorescence microscopy.2006

    • Author(s)
      Taguchi, Hideki
    • Organizer
      Cold Spring Harbor meeting of Molecular Chaperones and Heat Shock Responses
    • Place of Presentation
      Cold Spring Harbor, USA
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Book] タンパク質の一生 中マスター 細における成熟・輸送・品質管理2007

    • Author(s)
      (編集)遠藤斗志也, 和俊, 田口英樹
    • Total Pages
      190
    • Publisher
      羊土社
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Book] タンパク質の一生 集中マスター 細胞における成熟・輸送・品質管理2007

    • Author(s)
      田口 英樹 (編集)
    • Total Pages
      146
    • Publisher
      羊土社
    • Related Report
      2007 Annual Research Report
  • [Book] ナノバイオ計測の実際2007

    • Author(s)
      上野 太郎, 田口 英樹 (分担)
    • Publisher
      講談社サイエンティフィック
    • Related Report
      2007 Annual Research Report
  • [Book] タンパク質の一生 集中マスター2007

    • Author(s)
      遠藤斗志也, 森和俊, 田口英樹
    • Total Pages
      146
    • Publisher
      羊土社
    • Related Report
      2006 Annual Research Report

URL: 

Published: 2005-04-01   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi