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Molecular mechanism of light-sensor proteins containing a flavin

Research Project

Project/Area Number 17370057
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Biophysics
Research InstitutionNagoya Institute of Technology

Principal Investigator

KANDORI Hideki  Nagoya Institute of Technology, Graduate School of Engineering, Professor, 工学研究科, 教授 (70202033)

Project Period (FY) 2005 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥14,800,000 (Direct Cost: ¥14,800,000)
Fiscal Year 2006: ¥4,300,000 (Direct Cost: ¥4,300,000)
Fiscal Year 2005: ¥10,500,000 (Direct Cost: ¥10,500,000)
Keywordsbiophysics / nano-bio / biomolecule / protein / photo-switch / flavin / FTIR / hydrogen bond
Research Abstract

Phototropin is a blue-light sensor protein in plants, and LOV domain binds a flavin mononucleotide (FMN) as a chromophore. A photointermediate state, S390, is formed by light-induced adduct formation between FMN and a nearby cysteine, which triggers protein structural changes for kinase activation in phototropin. In this project, we aimed at revealing the molecular mechanism of light-signal transduction in LOV domains.
By means of low-temperature FTIR spectroscopy, we revealed that the reactive cysteine is protonated in the triplet-excited state of the LOV2 domain of Adiantum phytochrome3 (phy3-LOV2) as well as its unphotolyzed state. Its hydrogen-bonding interaction is strengthened in the triplet-excited state, presumably with the FMN chromophore, and such strong interaction drives adduct formation in a microsecond timescale.
Phototropin has two LOV domains called LOV1 and LOV2. Why does it have two domains? A transgenic study suggested that only LOV2 is necessary in the function of phototropin, whereas X-ray structures are surprisingly similar between LOV1 and LOV2 domains. We compared protein structural changes between the LOV1 and LOV2 domains of phy3 by means of UV-visible and FTIR spevctroscopy. We found that protein structural changes are much larger in LOV2 than in LOV1, which is consistent with their functional roles. We concluded that plants utilize a unique protein architecture (LOV domain) for different functions by regulating their protein structural changes. Regarding the protein structural changes, we previously observed temperature-dependent FTIR spectral changes in the amide-I vibrational region of peptide backbone for phy3-LOV2, suggesting the progressive structural changes in the protein moiety. Since FMN also possesses two C=O groups, we assigned C=O stretching vibrations of FMN and protein by using ^<13>C-labeling in this article. Consequently, temperature-dependent amide-I bands are unequivocally assigned by separating the chromophore bands.

Report

(3 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • Research Products

    (85 results)

All 2006 2005

All Journal Article (82 results) Book (3 results)

  • [Journal Article] Assignment of the Vibrational Modes of the Chromophore of Iodopsin and Bathoiodopsin : Low-Temperature Fourier Transform Infrared Spectroscopy of 13C- and 2H-Labeled Iodopsins2006

    • Author(s)
      T.Hirano et al.
    • Journal Title

      Biochemistry 45

      Pages: 1285-1294

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Structural Changes in the Schiff Base Region of Squid Rhodopsin upon Photoisomerization Studied by Low-Temperature FTIR Spectroscopy2006

    • Author(s)
      T.Ota et al.
    • Journal Title

      Biochemistry 45

      Pages: 2845-2851

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Transformation of Time-Resolved Spectra to Lifetime-Resolved Spectra by Maximum Entropy Inversion of the Laplace Transform.2006

    • Author(s)
      V.A.Lorenz-Fonfria et al.
    • Journal Title

      Appl. Spectrosc. 60

      Pages: 407-416

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Strongly Hydrogen-bonded Water Molecule is Observed only in the Alkaline Form of Proteorhodopsin.2006

    • Author(s)
      Y.Furutani et al.
    • Journal Title

      Chem. Phys. 324

      Pages: 705-708

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] FTIR Study of the Photoisomerization processes in the 13-cis and All-trans Forms of Anabaena Sensory Rhodopsin at 77 K2006

    • Author(s)
      A.Kawanabe et al.
    • Journal Title

      Biochemistry 45・14

      Pages: 4326-4370

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Temperature-Dependent Interactions between Photoactivated pharaonis Phoborhodopsin and Its Transducer2006

    • Author(s)
      K.Kamada et al.
    • Journal Title

      Biochemistry 45・15

      Pages: 4859-4866

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Internal Water Molecules of the Proton-pumping Halorhodopsin in the Presence of Azide.2006

    • Author(s)
      N.Muneda et al.
    • Journal Title

      J. Am. Chem. Soc. 128

      Pages: 6294-6295

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Hydrogen-bonding Interaction of the Protonated Schiff Base with Halides in a Chloride-pumping Bacteriorhodopsin Mutant.2006

    • Author(s)
      M.Shibata et al.
    • Journal Title

      Biochemistry 45

      Pages: 10633-10640

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Structural Changes in Bacteriorhodopsin Following Retinal Photoisomerization from the 13-cis Form2006

    • Author(s)
      N.Mizuide et al.
    • Journal Title

      Biochemistry 45

      Pages: 10674-10681

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Photoreaction Cycle of the Light, Oxygen, and Voltage Domain in FKF1 Determined by Low-Temperature Absorption Spectroscopy2006

    • Author(s)
      K.Zikihara et al.
    • Journal Title

      Biochemistry 45・36

      Pages: 10828-10837

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Assignment of the Hydrogen-Out-Of-Plane and In-Plane Vibrations of the Retinal Chromophore in the K Intermediate of pharaonis Phoborhodopsin2006

    • Author(s)
      Y.Furutani et al.
    • Journal Title

      Biochemistry 45・39

      Pages: 11836-11843

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Functional importance of the interhelical hydrogen bond between THR204 and TYR174 of sensory rhodopsin II and its alteration during the signaling process2006

    • Author(s)
      Y.Sudo et al.
    • Journal Title

      Journal of Biological Chemistry 281・45

      Pages: 34239-34245

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Deprotonation of Glu234 during the photocycle of Natronomonas pharaonis halorhodopsin2006

    • Author(s)
      M.Shibata et al.
    • Journal Title

      Chem. Phys. Lett. 432

      Pages: 545-547

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Conformational Coupling between the Cytoplasmic Carboxylic Acid and the Retinal in a Fungal Light-Driven Proton Pump2006

    • Author(s)
      Y.Furutani et al.
    • Journal Title

      Biochemistry 45・51

      Pages: 15349-15358

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Identification of the C=O Stretching Vibrations of FMN and Peptide Backbone by ^<13>C-Labeling of the LOV2 domain of Adiantum Phytochrome32006

    • Author(s)
      T.Iwata et al.
    • Journal Title

      Biochemistry 45・51

      Pages: 15384-15391

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Photochemistry in Phototropin, a Blue Light Sensor Protein in Plants2006

    • Author(s)
      T.Iwata, H.Kandori
    • Journal Title

      Journal of the Chinese Chemical Society 53巻

      Pages: 67-73

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] 分子ポンプの謎に迫る2006

    • Author(s)
      神取秀樹
    • Journal Title

      東海化学工業会会報 249

      Pages: 8-12

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] エントロピーを減少させる光駆動プロトンポンプのしくみ2006

    • Author(s)
      神取秀樹
    • Journal Title

      Bionics 21

      Pages: 56-58

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Assignment of the Vibrational Modes of the Chromophore of Iodopsin and Bathoiodopsin : Low-Temperature Fourier Transform Infrared Spectroscopy of 13C-and 2H-Labeled Iodopsins2006

    • Author(s)
      T.Hirano, N.Fujioka, H.Imai, H.Kandori, A.Wada, M.Ito, Y.Shichida
    • Journal Title

      Biochemistry 45

      Pages: 1285-1294

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Structural Changes in the Schiff Base Region of Squid Rhodopsin upon Photoisomerization Studied by Low-Temperature FTIR Spectroscopy2006

    • Author(s)
      T.Ota, Y.Furutani, A.Terakita, Y.Shichida, H.Kandori
    • Journal Title

      Biochemistry 45

      Pages: 2845-2851

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Transformation of Time-Resolved Spectra to Lifetime-Resolved Spectra by Maximum Entropy Inversion of the Laplace Transform.2006

    • Author(s)
      V.A.Lorenz-Fonfria, H.Kandori.
    • Journal Title

      Appl Spectrosc. 60

      Pages: 407-416

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Strongly Hydrogen-Bonded Water Molecule is Observed only in the Alkaline Form of Proteorhodopsin2006

    • Author(s)
      Y.Furutani, D.Ikeda, M.Shibata, H.Kandori
    • Journal Title

      Chem.Phys. 324

      Pages: 705-708

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] FTIR Study of the Photoisomerization Processes in the 13-cis and All-trans Forms of Anabaena Sensory Rhodopsin at 77 K2006

    • Author(s)
      A.Kawanabe, Y.Furutani, K.-H.Jung, H.Kandori
    • Journal Title

      Biochemistry 45

      Pages: 4362-4370

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Temperature-Dependent Interactions between Photoactivated Pharaonis Phoborhodopsin and Its Transducer2006

    • Author(s)
      K.Kamada, Y.Furutani, Y.Sudo, N.Kamo, H.Kandori
    • Journal Title

      Biochemistry 45

      Pages: 4859-4866

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Internal Water Molecules of the Proton-Pumping Halorhodopsin in the Presence of Azide2006

    • Author(s)
      N.Muneda, M.Shibata, M.Demura, H.Kandori
    • Journal Title

      J.Am.Chem.Soc. 128

      Pages: 6294-6295

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Hydrogen-Bonding Interaction of the Protonated Schiff Base with Halides in a Chloride-Pumping Bacteriorhodopsin Mutant2006

    • Author(s)
      M.Shibata, K.Ihara, H.Kandori
    • Journal Title

      Biochemistry 45

      Pages: 10633-10640

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Structural Changes in Bacteriorhodopsin Following Retinal Photoisomerization from the 13-cis Form2006

    • Author(s)
      N.Mizuide, M.Shibata, N.Friedman, M.Sheves, M.Belenky, J.Herzfeld, H.Kandori
    • Journal Title

      Biochemistry 45

      Pages: 10674-10681

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Photoreaction Cycle of the Light, Oxygen, and Voltage Domain in FKF1 Determined by Low-Temperature Absorption Spectroscopy2006

    • Author(s)
      K.Zikihara, T.Iwata, D.Matsuoka, H.Kandori, Takeshi Todo, Satoru Tokutomi
    • Journal Title

      Biochemistry 45

      Pages: 10828-10837

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Assignment of the Hydrogen-Out-Of-Plane and In-Plane Vibrations of the Retinal Chromophore in the K Intermediate of pharaonis Phoborhodopsin2006

    • Author(s)
      Y.Furutani, Y.Sudo, A.Wada, M.Ito, K.Shimono, N.Kamo, H.Kandori
    • Journal Title

      Biochemistry 45

      Pages: 11836-11843

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Functional importance of the interhelical hydrogen bond between THR204 and TYR174 of sensory rhodopsin II and its alteration during the signaling process2006

    • Author(s)
      Y.Sudo, Y.Furutani, H.Kandori, J.L.Spudich
    • Journal Title

      J.Biol.Chem. 281

      Pages: 34239-34245

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Deprotonation of G1u234 during the photocycle of Natronomonas pharaonis halorhodopsin2006

    • Author(s)
      M.Shibata, Y.Saito, M.Demura, H.Kandori
    • Journal Title

      Chem.Phys.Lett. 432

      Pages: 545-547

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Conformational Coupling between the Cytoplasmic Carboxylic Acid and the Retinal in a Fungal Light-Driven Proton Pump2006

    • Author(s)
      Y.Furutani, M.Sumii, Y.Fan, L.Shi, S.A.Waschuk, L.S.Brown^*, H.Kandori
    • Journal Title

      Biochemistry 45

      Pages: 15349-15358

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Identification of the CO= Stretching Vibrations of FMN and Peptide Backbone by 13C-Labeling of the LOV2 domain of Adiantum Phytochrome32006

    • Author(s)
      T.Iwata, D.Nozaki, Y.Sato, K.Sato, Y.Nishina, K.Shiga, S.Tokutomi, H.Kandori
    • Journal Title

      Biochemistry 45

      Pages: 15384-15391

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Photochemistry in Phototropin, a Blue Light Sensor Protein in Plants2006

    • Author(s)
      T.Iwata, H.Kandori
    • Journal Title

      J.Chin.Chem.Soc. 53

      Pages: 67-73

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Retinal binding proteins2006

    • Author(s)
      H.Kandori
    • Journal Title

      cis-trans Isomerization in Biochemistry (C.Dugave ed.)(Wiley-VCH Freiburg)

      Pages: 53-75

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Bunshipump no nazonisemaru (Japanese)2006

    • Author(s)
      H.Kandori
    • Journal Title

      Tokaikagakukougyoukai Kaihou 249

      Pages: 8-12

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Entropy wo gensyousaseru hikarikudouprotonpump no shikumi (Japanese)2006

    • Author(s)
      H.Kandori
    • Journal Title

      Bionics 21

      Pages: 56-58

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Photoisomerization Processes in the 13-cis and All-trans Forms of Anabaena Sensory Rhodopsin at 77 K2006

    • Author(s)
      A.Kawanabe et al.
    • Journal Title

      Biochemistry 45・14

      Pages: 4362-4370

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Demura and Hideki Kandon, Deprotonation of Glu234 during the Photocycle of Natronomonas pharaonis Halorhodopsin2006

    • Author(s)
      M.Shibata et al.
    • Journal Title

      Chem. Phys. Lett. 432

      Pages: 545-547

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Structural Changes in Bacteriorhodopsin Following Retinal Photoisomerization from the 13-cis Form.2006

    • Author(s)
      N.Mizuide et al.
    • Journal Title

      Biochemistry 45

      Pages: 10674-10681

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Water Structural Changes in the Activation Process of the LOV2 Domain of Adiantum Phytochrome3.2005

    • Author(s)
      Nozaki et al.
    • Journal Title

      J. Mol. Struct. 735/736

      Pages: 259-265

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Reactive Cysteine is Protonated in the Triplet Excited State of the LOV2 Domain in Adiantum Phytochrome3.2005

    • Author(s)
      Sato et al.
    • Journal Title

      J. Am. Chem. Soc. 127

      Pages: 1088-1089

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Structural Changes of the Complex between pharaonis Phoborhodopsin and Its Cognate Transducer upon Formation of the M Photointermediate.2005

    • Author(s)
      Furutani et al.
    • Journal Title

      Biochemistry 44

      Pages: 2909-2915

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] FTIR Studies of Internal Water Molecules in the Schiff Base Region of Bacteriorhodopsin.2005

    • Author(s)
      Shibata et al.
    • Journal Title

      Biochemistry 44

      Pages: 7406-7413

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Comparative Investigation of the LOV1 and LOV2 Domains in Adiantum Phytochrome3.2005

    • Author(s)
      Iwata et al.
    • Journal Title

      Biochemistry 44

      Pages: 7427-7434

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] FTIR Studies of the Photoactivation Processes in Squid Retinochrome.2005

    • Author(s)
      Furutani et al.
    • Journal Title

      Biochemistry 44

      Pages: 7988-7997

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Unique Temperature Dependence in the Adduct Formation between FMN and Cysteine S-H Group in the LOV2 Domain of Adiantum Phytochrome3.2005

    • Author(s)
      Nozaki et al.
    • Journal Title

      Chem. Phys. Lett. 410

      Pages: 59-63

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Hydrogen-Bonding Alterations of the Protonated Schiff Base and Water Molecule in the Chloride Pump of Natronobacterium pharaonis.2005

    • Author(s)
      Shibata et al.
    • Journal Title

      Biochemistry 44

      Pages: 12279-12286

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary 2005 Annual Research Report
  • [Journal Article] FTIR Spectroscopy of the All-Trans Form of Anabaena Sensory Rhodopsin at 77 K : Hydrogen Bond of a Water between the Schiff Base and Asp75.2005

    • Author(s)
      Furutani et al.
    • Journal Title

      Biochemistry 44

      Pages: 12287-12296

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary 2005 Annual Research Report
  • [Journal Article] Redox-induced Protein Structural Changes in Cytochrome bo Revealed by Fourier-transform Infrared Spectroscopy and ^<13>C-Tyr-labeling.2005

    • Author(s)
      Kandori et al.
    • Journal Title

      J. Biol. Chem. 280

      Pages: 32821-32826

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Strongly Hydrogen-Bonded Water Molecule Present near the Retinal Chromophore of Leptosphaeria Rhodopsin, the Bacteriorhodopsin-like Proton Pump from a Eukaryote.2005

    • Author(s)
      Sumii et al.
    • Journal Title

      Biochemistry 44

      Pages: 15159-15166

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary 2005 Annual Research Report
  • [Journal Article] Steric Constraint in the Primary Photoproduct of an Archaeal Rhodopsin from Regiospecific Perturbation of C-D Stretching Vibration of the Retinyl Chromophore.2005

    • Author(s)
      Sudo et al.
    • Journal Title

      J. Am. Chem. Soc. 127

      Pages: 16036-16037

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Mechanism of Photoactivation in the LOV2 Domain of Adiantum Phytochrome3.2005

    • Author(s)
      Iwata et al.
    • Journal Title

      Recent Res. Devel. Biochem. 6

      Pages: 1-26

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Strongly Hydrogen-Bonded Water Molecules in the Schiff Base Region of Rhodopsins.2005

    • Author(s)
      Furutani et al.
    • Journal Title

      Photochem. Photobiol. Sci. 4

      Pages: 661-666

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] イオンポンプの機能にかかわる蛋白質内部の水分子2005

    • Author(s)
      神取秀樹
    • Journal Title

      現代化学 414

      Pages: 51-57

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary 2005 Annual Research Report
  • [Journal Article] Water Structural Changes in the Activation Process of the LOV2 Domain of Adiantum Phytochrome32005

    • Author(s)
      D.Nozaki, T.Iwata, S.Tokutomi, H.Kandori
    • Journal Title

      J.Mol Struct. 735/736

      Pages: 259-265

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Reactive Cysteine is Protonated in the Triplet Excited State of the LOV2 Domain in Adiantum Phytochrome32005

    • Author(s)
      Y.Sato, T.Iwata, S.Tokutomi, H.Kandori
    • Journal Title

      J.Am.Chem.Soc. 127

      Pages: 1088-1089

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Structural Changes of the Complex between pharaonis Phoborhodopsin and Its Cognate Transducer upon Formation of the M Photointermediate2005

    • Author(s)
      Y.Furutani, K.Kamada, Y.Sudo, K.Shimono, N.Kamo, H.Kandori
    • Journal Title

      Biochemistry 44

      Pages: 2909-2915

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] FTIR Studies of Internal Water Molecules in the Schiff Base Region of Bacteriorhodopsin2005

    • Author(s)
      M.Shibata, H.Kandori
    • Journal Title

      Biochemistry 44

      Pages: 7406-7413

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Comparative Investigation of the LOV1 and LOV2 Domains in Adiantum Phytochrome32005

    • Author(s)
      T.Iwata, D.Nozaki, S.Tokutomi, H.Kandori
    • Journal Title

      Biochemistry 44

      Pages: 7427-7434

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] FTIR Studies of the Photoactivation Processes in Squid Retinochrome2005

    • Author(s)
      Y.Furutani, A.Terakita, Y Shichida, H.Kandori
    • Journal Title

      Biochemistry 44

      Pages: 7988-7997

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Unique Temperature Dependence in the Adduct Formation between FMN and Cysteine S-H Group in the LOV2 Domain of Adiantum Phytochrome32005

    • Author(s)
      D.Nozaki, T.Iwata, S.Tokutomi, H.Kandori
    • Journal Title

      Chem.Phys.Lett. 410

      Pages: 59-63

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Hydrogen-Bonding Alterations of the Protonated Schiff Base and Water Molecule in the Chloride Pump of Natronobacterium pharaonis2005

    • Author(s)
      M.Shibata, N.Muneda, T.Sasaki, K.Shimono, N.Kamo, M.Demura, H.Kandori
    • Journal Title

      Biochemistry 44

      Pages: 12279-12286

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] FTIR Spectroscopy of the All-trans Form of Anabaena Sensory Rhodopsin at 77K : Hydrogen Bond of a Water between the Schiff Base and Asp752005

    • Author(s)
      Y.Furutani, A.Kawanabe, K-H.Jung, H.Kandori
    • Journal Title

      Biochemistry 44

      Pages: 12287-12296

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Redox-induced Protein Structural Changesin Cytochrome bo Revealed by Fourier-transform Infrared Spectroscopy and 13C-Tyr-labeling2005

    • Author(s)
      H.Kandori, H.Nakamura, Y.Yamazaki, T.Mogi
    • Journal Title

      J.Biol.Chem. 280

      Pages: 32821-32826

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Strongly Hydrogen-Bonded Water Molecule Present near the Retinal Chromophore of Leptosphaeria Rhodopsin, the Bacteriorhodopsin-like Proton Pump from a Eukaryote2005

    • Author(s)
      M.Sumii, Y.Furutani, S.A.Waschuck, L.S.Brown, H.Kandori
    • Journal Title

      Biochemistry 44

      Pages: 15159-15166

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Steric Constraint in the Primary Photoproduct of an Archaeal Rhodopsin from Regiospecific Perturbation of C-C Stretching Vibration of the Retinyl Chromophore2005

    • Author(s)
      Y.Sudo, Y.Furutani, A.Wada, M.Ito, N.Kamo, H.Kandori
    • Journal Title

      J.Am.Chem.Soc. 127

      Pages: 16036-16037

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Mechanism of Photoactivation in the LOV2 Domain of Adiantum Phytochrome32005

    • Author(s)
      T.Iwata, S.Tokutomi, H.Kandori
    • Journal Title

      Recent Res.Devel.Biochem. 6

      Pages: 1-26

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Strongly Hydrogen-Bonded Water Molecules in the Schiff Base Region of Rhodopsins2005

    • Author(s)
      Y.Furutani, M.Shibata, H.Kandori
    • Journal Title

      Photochem.Photobiol.Sci. 4

      Pages: 661-666

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Ion pump no kinounikakawaru, tanpakushitsunaibuno, mizubunshi (Japanese)2005

    • Author(s)
      H.Kandori
    • Journal Title

      Gendaikagaku 414

      Pages: 51-57

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Ion Pump (Japanese)2005

    • Author(s)
      H.Kandori
    • Journal Title

      Saibouseibutsugakuziten (Asakura Syoten)

      Pages: 36-37

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Water Structural Changes in the Activation Process of the LOV2 Domain of Adiantum Phytochrome3.2005

    • Author(s)
      Nozaki et al.
    • Journal Title

      J.Mol.Struct. 735/736

      Pages: 259-265

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Reactive Cysteine is Protonated in the Triplet Excited State of the LOV2 Domain in Adiantum Phytochrome3.2005

    • Author(s)
      Sato et al.
    • Journal Title

      J.Am.Chem.Soc. 127

      Pages: 1088-1089

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Structural Changes of the Complex between pharaonis Phoborhodopsin and Its Cognate Transducer upon Formation of the M Photointermediate.2005

    • Author(s)
      Furutani et al.
    • Journal Title

      Biochemisty 44

      Pages: 2909-2915

    • Related Report
      2005 Annual Research Report
  • [Journal Article] FTIR Studies of Internal Water Molecules in the Schiff Base Region of Bacteriorhodopsin.2005

    • Author(s)
      Shibata et al.
    • Journal Title

      Biochemisty 44

      Pages: 7406-7413

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Comparative Investigation of the LOV1 and LOV2 Domains in Adiantum Phytochrome3.2005

    • Author(s)
      Iwata et al.
    • Journal Title

      Biochemisty 44

      Pages: 7427-7434

    • Related Report
      2005 Annual Research Report
  • [Journal Article] FTIR Studies of the Photoactivation Processes in Squid Retinochrome.2005

    • Author(s)
      Furutani et al.
    • Journal Title

      Biochemisty 44

      Pages: 7988-7997

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Unique Temperature Dependence in the Adduct Formation between FMN and Cysteine S-H Group in the LOV2 Domain of Adiantum Phytochrome3.2005

    • Author(s)
      Nozaki et al.
    • Journal Title

      Chem.Phys.Lett. 410

      Pages: 59-63

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Redox-induced Protein Structural Changes in Cytochrome bo Revealed by Fourier-transform Infrared Spectroscopy and ^<13>C-Tyr-labeling.2005

    • Author(s)
      Kandori et al.
    • Journal Title

      J.Biol.Chem. 280

      Pages: 32821-32826

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Steric Constraint in the Primary Photoproduct of an Archaeal Rhodopsin from Regiospecific Perturbation of C-D Stretching Vibration of the Retinyl Chromophore.2005

    • Author(s)
      Sudo et al.
    • Journal Title

      J.Am.Chem.Soc. 127

      Pages: 16036-16037

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Strongly Hydrogen-Bonded Water Molecules in the Schiff Base Region of Rhodopsins.2005

    • Author(s)
      Furutani et al.
    • Journal Title

      Photochem.Photobiol.Sci. 4

      Pages: 661-666

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Mechanism of Photoactivation in the LOV2 Domain of Adiantum Phytochrome3.2005

    • Author(s)
      Iwata et al.
    • Journal Title

      Recent Res.Devel.Biochem. 6

      Pages: 1-26

    • Related Report
      2005 Annual Research Report
  • [Book] cis-trans Isomerization in Biochemistry2006

    • Author(s)
      H.Kandori
    • Publisher
      Retinal binding proteins
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Book] 細胞生物学事典(朝倉書店)2005

    • Author(s)
      神取秀樹
    • Publisher
      イオンポンプ
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Book] 細胞生物学事典2005

    • Author(s)
      神取秀樹
    • Total Pages
      2
    • Publisher
      朝倉書店
    • Related Report
      2005 Annual Research Report

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Published: 2005-04-01   Modified: 2016-04-21  

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