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Regulation of poly-gamma-glutamate synthesis and degradation in Bacillus subtlis

Research Project

Project/Area Number 17380057
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied microbiology
Research InstitutionTohoku University (2006)
Akita Prefectural Agriculture, Forestry and Fisheries Research Center (2005)

Principal Investigator

ITOH Yoshifumi  Tohoku University, Graduate School of Agricultural Science, Professor, 大学院農学研究科, 教授 (70135127)

Co-Investigator(Kenkyū-buntansha) ABE Naoki  Tohoku University, Graduate School of Agricultural Science, Research Associate, 大学院農学研究科, 助手 (90202671)
OGASAWARA Hironobu  Akita Prefectural Agriculture, Forestry and Fisheries Research Center, Akita Research Center for Food and Brewing, Enzyme and Microbiology Group, Senior Researcher, 総合食品研究所・酵素・微生物班, 主任研究官 (50390901)
KIMURA Keitarou  National Food Research Institute, Division of Applied Microbiology, Senior Researcher, 食品産業技術総合研究機構・食品総合研究所・微生物利用研究領域, 主任研究官 (20353980)
Project Period (FY) 2005 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥11,800,000 (Direct Cost: ¥11,800,000)
Fiscal Year 2006: ¥5,700,000 (Direct Cost: ¥5,700,000)
Fiscal Year 2005: ¥6,100,000 (Direct Cost: ¥6,100,000)
KeywordsMicroorgamism / Bacillus subtilis / Environmental adaptation / Gene regulation / Protein kinase / Transcriptional regulator / Polypeptide synthesis / プロテインカイネーズ / 納豆菌 / 粘質物 / ポリグルタミン酸 / 栄養応答 / 挿入配列 / 融合遺伝子
Research Abstract

We investigated nutrient factors that affect the synthesis and degradation of extracellular polymer of glutamate, poly-γ-glutamate (PGA), in Bacillus subtilis NAFM5, a derivative of a starter strain for Natto (Japanese fermented soybean food). We also analyzed regulatory systems involved in the regulation of the PGA biosynthetic and degradative enzyme genes. Our major results include :
1. Regulation of the capBCAEPGA biosynthetic operon by nutrients.
L-Glutamate and glucose stimulated PGA production by 2.5-and 3-fold, but repressed expression of a capB::lacZ fusion to 1/2 and 1/6, respectively. Nutrient-rich GSP medium, which contained soybean protein hydroysates, greatly improved (11 fold of that in minimal medium), whereas LB medium almost prevent capB::lacZ expression and PGA production.
2. Regulation of the capBCAE PGA biosynthetic operon by the quorum-sensing system.
We found that degQ and degSU genes are essential for PGA synthesis and determined by gel-shift assays that DegU binds to-720 ro-660 region of the capB promoter.
3. Regulation of ywtD and ggt.]
We found that ggt is under the control of the ComQXPA quorum-sensing system. Genetic study showed that ywrD encodes an end-type of PGA hdrolase. This gene appeared not regulated by the quorum-sensing system.
4. Functional analysis of vvzD.
Using a knockout mutant of yvzD, we demonstrated that this gene encode a deanchoring enzyme detaching cell-wall associated PGA. Thus, at least three genes, yvzD, ywtD and ggt, are involved in PGA degradation. YvzD is also not controlled by the quorum-sensing system.

Report

(3 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • Research Products

    (13 results)

All 2007 2006 2005

All Journal Article (12 results) Book (1 results)

  • [Journal Article] Poly-γ-glutamate capsule-degrading enzyme treatment enhances phagocytosis and killing of encapsulated Bacillus anthracis2007

    • Author(s)
      A.Scorpio, D.J.Chabot, Y.Itoh, A.M.Friedlander
    • Journal Title

      Antimicrobial Agents and Chemotherapy 51・1

      Pages: 515-222

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Poly-γ-glutamate capsule-degrading enzyme treatment enhances phagocytosis and killing of encapsulated Bacillus anthracis2007

    • Author(s)
      Scorpio A., Chabot D.J., Itoh Y., Friedlander A.M.
    • Journal Title

      Antimicrobial Agents and Chemotherapy 51 (1)

      Pages: 515-212

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Functionality of Natto2007

    • Author(s)
      Kimura K.Itoh Y., Hori K.
    • Journal Title

      Functionality of Fermented Foods 86-92

      Pages: 108-108

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Characterization and a role of Pseudomonas aeruginosa Spermidine Dehydrogenase in Polyamine Catabolism2006

    • Author(s)
      V.V.Dasu, Y.Nakada, K.Kimura, Y.Itoh
    • Journal Title

      Microbiology 152・8

      Pages: 2265-2272

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] 納豆菌も納豆粘質物(ポリグルタミン酸)を食べる!巧妙な集団栄養確保戦略を探る.2006

    • Author(s)
      伊藤義文, 木村啓太郎
    • Journal Title

      化学と生物 44・8

      Pages: 569-572

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Characterization and a role of Pseudomonas aeruginosa Spermidine Dehydrogenase in Polyamine Catabolism2006

    • Author(s)
      Dasu V.V., Nakada Y., Kimura K., Itoh Y.
    • Journal Title

      Microbiology 152 (8)

      Pages: 2265-2272

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Bacillus subtilis (natto) utilize poly-y-glutamate as nutrient. A strategy for nutrient reservation (in Japanese)2006

    • Author(s)
      Itoh Y., Kimura K.
    • Journal Title

      Kagaku To Seibuttsu 44 (8)

      Pages: 569-572

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] 納豆菌も納豆粘質物(ポリグルタミン酸)を食べる!巧妙な集団栄養確保戦略を探る2006

    • Author(s)
      伊藤義文, 木村啓太郎
    • Journal Title

      化学と生物 44・8

      Pages: 569-572

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Paenidase, a novel D-aspartyl endopeptidase from Paenibacillus sp. B38 : purification and substrate specificity2006

    • Author(s)
      Takanashi S, Ogasawara H, Hiwatashi, Hori K, Hata K, Tachibana T, Itoh Y, Sugiyama T.
    • Journal Title

      Journal of Biochemistry 139・1

      Pages: 197-202

    • NAID

      10018847533

    • Related Report
      2005 Annual Research Report
  • [Journal Article] 納豆菌も納豆粘質物(ポリグルタミン酸)を食べる2006

    • Author(s)
      伊藤義文, 木村啓太郎
    • Journal Title

      化学と生物 44(印刷中)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Isolation of a Bacillus subtilis mutant defective in poly-gamma-glutamate production and application of the mutant in Natto fermentation2005

    • Author(s)
      Kimura K., Itoh Y.
    • Journal Title

      Japanese patent No. 3682435

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Pseudomonas aeruginosa PAO1 gene for 3-guanidonopropionate and 4-guanidinobutyrate may be derived from a common ancestor2005

    • Author(s)
      Nakada Y, Itoh Y
    • Journal Title

      Microbiology 151・12

      Pages: 4055-4062

    • Related Report
      2005 Annual Research Report
  • [Book] 醸造物の機能性(分担)2007

    • Author(s)
      木村貴一, 伊藤義文, 堀一之
    • Total Pages
      108
    • Publisher
      日本生物工学会スローフード微生物工学研究部会・日本醸造協会
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary

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Published: 2005-04-01   Modified: 2016-04-21  

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