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Functional analysis of gastric cancer-specific genes identified by SAGE data and its clinical implication

Research Project

Project/Area Number 17390104
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Human pathology
Research InstitutionHiroshima University

Principal Investigator

YASUI Wataru  Hiroshima University, Graduate School of Biomedical Sciences, Professor, 大学院医歯薬学総合研究科, 教授 (40191118)

Co-Investigator(Kenkyū-buntansha) NAKAYAMA Hirofumi  Hiroshima University, Graduate School of Biomedical Sciences, Associate Professor, 大学院医歯薬学総合研究科, 助教授 (50253068)
OUE Naohide  Hiroshima University, Graduate School of Biomedical Sdences, Research Associate, 大学院医歯薬学総合研究科, 助手 (60346484)
倉岡 和矢  広島大学, 大学院・医歯薬学総合研究科, 助手 (00397928)
Project Period (FY) 2005 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥14,500,000 (Direct Cost: ¥14,500,000)
Fiscal Year 2006: ¥6,600,000 (Direct Cost: ¥6,600,000)
Fiscal Year 2005: ¥7,900,000 (Direct Cost: ¥7,900,000)
KeywordsGastric cancer / SAGE library / Immunostaining / ELISA / Functional analysis / Custom-made array / REGIV / SNP / 治療標的 / CLDN-18 / 三次元カスタムアレイ / MIA / MMP-10
Research Abstract

The purpose of the study is to identify novel gastric cancer-specific genes through SAGE data analysis and to establish new system of cancer diagnosis oriented towards molecular target therapy. Following results were obtained:
1) By comparison between SAGE libraries of gastric cancer (GSE545) and 14 normal organs in combination with RT-PCR, 9 gastric cancer-specific genes (APIN, MIA, MMP-10, DKK4, REGIV, etc.) have been identified.
2) By immunostaining, expression of MIA and MMP-10 were correlated with grade of malignancy and poor prognosis. REGIV expression was detected not only in gastric cancer but in colorectal cancer, pancreas cancer and GI carcinoid.
3) By ELISA, high levels of REGIV and MMP-10 in sera were detected in 36% and 95% of gastric cancer patients, respectively.
4) Through functional analyses, phosphorylation of EGFR and inhibition of caspase-9 were found to participate in apoptosis inhibition by 5-FU. SCP18, whose expression is associated with tumor stage and metastasis, promoted cell invasion by forced expression in gastric cancer cell line.
5) Regarding the relation between genetic polymorphism of tumor-related genes and gastric cancer, SNP (G/A) in 5'UTR of the CLDN18, new candidate tumor suppressor of gastric cancer, was found to affect gastric cancer risk (OR-5.17, 95%CI: 2.01-13.3).
6) We have developed custom-made oligo-DNA microarray with 207 cDNAs including specific genes identified by SAGE analysis, known genes related to development and progression of cancer, and genes participating in DNA damage response and repair. By examining gene expression profiles of 20 gastric cancers, we identified 23 genes related invasion, nodal metastasis and tumor stage.

Report

(3 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • Research Products

    (55 results)

All 2007 2006 2005 Other

All Journal Article (53 results) Book (2 results)

  • [Journal Article] DNA demethylation of vascular endothelial growth factor-C is associated with gene expression and its possible involvement of lymphangiogenesis in gastric cancer2007

    • Author(s)
      Matsumura S
    • Journal Title

      Int. J. Cancer 120

      Pages: 1689-1695

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Reg IV is a serum biomarker for gastric cancer patients and predicts response to 5-fluorouracil-based chemotherapy2007

    • Author(s)
      Mitani Y
    • Journal Title

      Oncogene (in press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] DNA demethylation of vascular endothelial growth factor-C is associated with gene expression and its possible involvement of lymphangiogenesis in gastric cancer2007

    • Author(s)
      Matsumura S.
    • Journal Title

      Int. J. Cancer 120

      Pages: 1689-1695

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] DNA demethylation of vascular endothelial growth factor-C is associated with gene expression and its possible involvement of lymphagiogenesis in gastric cancer2007

    • Author(s)
      Matsumura S
    • Journal Title

      Int. J. Cancer 120

      Pages: 1689-1695

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Systematic search for gastric cancer-specific genes based on SAGE data : melanoma inhibitory activity and matrix metalloproteinase-10 are novel prognostic factors in patients with gastric cancer2006

    • Author(s)
      Aung PP
    • Journal Title

      Oncogene 25

      Pages: 2546-2557

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Down-regulation of the claudin-18 gene, identified through serial analysis of gene expression data analysis, in gastric cancer with an intestinal phenotype2006

    • Author(s)
      Sanada Y
    • Journal Title

      J. Pathol. 208

      Pages: 633-642

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Accumulation of DNA methylation is associated with tumor stage in gastric cancer2006

    • Author(s)
      Oue N
    • Journal Title

      Cancer 106

      Pages: 1250-1259

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Differential expression of claudin-2 in normal human tissues and gastrointestinal carcinomas2006

    • Author(s)
      Aung PP
    • Journal Title

      Virchow Arch. 448

      Pages: 428-434

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Glycogen synthase kinase-3 and H-prune regulate cell migration by modulating focal adhesions2006

    • Author(s)
      Kobayashi T
    • Journal Title

      Mol. Cell Biol. 26

      Pages: 898-911

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Molecular characteristics of differentiated-type gastric carcinoma with distinct mucin phenotype : LI-cadherin is associated with intestinal phenotype2006

    • Author(s)
      Motoshita J
    • Journal Title

      Pathol. Int. 56

      Pages: 200-205

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Lack of pericryptal fibroblastic cells adjacent to intestinal epithelial metaplastic glands2006

    • Author(s)
      Nakayama H
    • Journal Title

      Histopathol. 48

      Pages: 610-612

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Expression of Wnt-5a is correlated with aggressiveness of gastric cancer by stimulating cell migration and invasion2006

    • Author(s)
      Kurayoshi M
    • Journal Title

      Cancer Res. 66

      Pages: 10439-10448

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Molecular pathobiology of gastric cancer (review)2006

    • Author(s)
      Yasui W
    • Journal Title

      Scand. J. Surg. 95

      Pages: 225-231

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Systematic search for gastric cancer-specific genes based on SAGE data : melanoma inhibitory activity and matrix metalloproteinase-10 are novel prognostic factors in patients with gastric cancer2006

    • Author(s)
      Aung PP.
    • Journal Title

      Oncogene 25

      Pages: 2546-2557

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Down-regulation of the claudin-18 gene, identified through serial analysis of gene expression data analysis, in gastric cancer with an intestinal phenotype2006

    • Author(s)
      Sanada Y.
    • Journal Title

      J. Pathol. 208

      Pages: 633-642

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Accumulation of DNA methylation is associated with tumor stage in gastric cancer2006

    • Author(s)
      Oue N.
    • Journal Title

      Cancer 106

      Pages: 1250-1259

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Differential expression of claudin-2 in normal human tissues and gastrointestinal carcinomas2006

    • Author(s)
      Aung PP.
    • Journal Title

      Virchow Archiv. 448

      Pages: 428-434

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Glycogen synthase kinase-3 and H-prune regulate cell migration by modulating focal adhesions2006

    • Author(s)
      Kobayashi T.
    • Journal Title

      Mol. Cell. Biol. 26

      Pages: 898-911

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Molecular characteristics of differentiated-type gastric carcinoma with distinct mucin phenotype : LI-cadherin is associated with intestinal phenotype2006

    • Author(s)
      Motoshita J.
    • Journal Title

      Pathol. Int. 56

      Pages: 200-205

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Lack of pericryptal fibroblastic cells adjacent to intestinal epithelial metaplastic glands2006

    • Author(s)
      Nakayama H.
    • Journal Title

      Histopathol. 48

      Pages: 610-612

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Expression of Wnt-5a is correlated with aggressiveness of gastric cancer by stimulating cell migration and invasion2006

    • Author(s)
      Kurayoshi M.
    • Journal Title

      Cancer Res. 66

      Pages: 10439-104448

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Molecular pathobiology of gastric cancer (review)2006

    • Author(s)
      Yasui W.
    • Journal Title

      Scand. J. Surg. 95

      Pages: 225-231

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Molecular characteristics of differentiated-type gastric carcinoma with distinct mucin phenotype : LI-cadherin in associated with intestinal phenotype2006

    • Author(s)
      Motoshita J
    • Journal Title

      Pathol. Int. 56

      Pages: 200-205

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Accumulation of DNA methylation is associated with tumor stage in gastric cancer2006

    • Author(s)
      Oue, N.
    • Journal Title

      Cancer (in press)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Systematic search for gastric cancer-specific genes based on SAGE data : melanoma inhibitory activity and matrix metalloproteinase-10 are novel prognostic factors in patients with gastric cancer2006

    • Author(s)
      Aung, PP.
    • Journal Title

      Oncogene (in press)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Down-regulation of the claudin-18 gene, identified through serial analysis of gene expression data analysis, in intestinal phenotype of gastric cancer2006

    • Author(s)
      Sanada, Y.
    • Journal Title

      J.Pathol. (in press)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Differential expression of claudin-2 in normal human tissues and gastrointestinal carcinomas2006

    • Author(s)
      Aung, PP.
    • Journal Title

      Virchow Archiv. (in press)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Quantitative analysis of lymphangiogenic markers for predicting metastasis of human gastric carcinoma to lymph nodes2005

    • Author(s)
      Kitadai Y
    • Journal Title

      Int. J. Cancer 115

      Pages: 388-392

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Clinicopathological significance and prognostic influence of cadherin-17 expression in gastric cancer2005

    • Author(s)
      Ito R
    • Journal Title

      Virchow Arch. 447

      Pages: 717-722

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] DNA methylation profile in differentiated type gastric carcinoma with distinct mucin phenotypes2005

    • Author(s)
      Motoshita J
    • Journal Title

      Cancer Sci. 96

      Pages: 474-479

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Expression and localization of RegIV in human neoplastic and non-neoplastic tissues : RegIV expression is associated with intestinal and neuroendocrine differentiation in gastric adenocarcinoma2005

    • Author(s)
      Oue N
    • Journal Title

      J. Pathol. 207

      Pages: 185-198

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] DNA methylation of genes linked with retinoid signaling in gastric cancer : expression of retinoic acid receptor b, cellular retinol binding protein land tazarotene-induced gene 1 is associated with DNA methylation2005

    • Author(s)
      Shutoh M
    • Journal Title

      Cancer 104

      Pages: 1609-1619

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Molecular-pathological prognostic factor of gastric cancer : a review2005

    • Author(s)
      Yasui W
    • Journal Title

      Gastric Cancer 8

      Pages: 86-94

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Genes involved in invasion and metastasis of gastric cancer identified by array-based hybridization and serial analysis of gene expressio2005

    • Author(s)
      Oue N
    • Journal Title

      Oncology 69S1

      Pages: 17-22

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] G1P3, an interferon inducible gene 6-16, is expressed in gastric cancers and inhibits mitochondrial-mediated apoptosis in gastric cancer cell line TMK-1 cell2005

    • Author(s)
      Tahara E Jr
    • Journal Title

      Cancer Immunol Immunother 54

      Pages: 729-740

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Quantitative analysis of lymphangiogenic markers for predicting metastasis of human gastric carcinoma to lymph nodes2005

    • Author(s)
      Kitadai Y.
    • Journal Title

      Int. J. Cancer 115

      Pages: 388-392

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Clinicopathological significance and prognostic influence of cadherin-17 expression in gastric cancer2005

    • Author(s)
      Ito R.
    • Journal Title

      Virchow Arch. 447

      Pages: 717-722

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] DNA methylation profile in differentiated type gastric carcinoma with distinct mucin phenotypes2005

    • Author(s)
      Motoshita J.
    • Journal Title

      Cancer Sci. 96

      Pages: 474-479

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Expression and localization of RegIV in human neoplastic and non-neoplastic tissues : RegIV expression is associated with intestinal and neuroendocrine differentiation in gastric adenocarcinoma2005

    • Author(s)
      Oue N.
    • Journal Title

      J. Pathol. 207

      Pages: 185-198

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] DNA methylation of genes linked with retinoid signaling in gastric cancer : expression of retinoic acid receptor b, cellular retinol binding protein land tazarotene-induced gene 1 is associated with DNA methylation2005

    • Author(s)
      Shutoh M.
    • Journal Title

      Cancer 104

      Pages: 1609-1619

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Molecular-pathological prognostic factor of gastric cancer : a review2005

    • Author(s)
      Yasui W.
    • Journal Title

      Gastric Cancer 8

      Pages: 86-94

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Genes involved in invasion and metastasis o gastric cancer identified by array-based hybridization and serial analysis of gene expression2005

    • Author(s)
      Oue N.
    • Journal Title

      Oncology 69S1

      Pages: 17-22

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] G1P3, an interferon inducible gene 6-16, is expressed in gastric cancers and inhibits mitochondrial-mediated apoptosis in gastric cancer cell line TMK-1 cell2005

    • Author(s)
      Tahara E Jr.
    • Journal Title

      Cancer Immunol Immunother 54

      Pages: 729-740

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Recent advances in molecular pathobiology of gastric carcinoma2005

    • Author(s)
      Yasui W.
    • Journal Title

      The Diversity of Gastric Carcinoma : Pathogenesis, Diagnosis, and Therapy Springer-Verlag:51-71

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Quantitative analysis of lymphangiogenic markers for predicting metastasis of human gastric carcinoma to lymph nodes2005

    • Author(s)
      Kitadai, Y.
    • Journal Title

      Int.J.Cancer 115

      Pages: 388-392

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Clinicopathological significance and prognostic influence of cadherin-17 expression in gastric cancer2005

    • Author(s)
      Ito, R.
    • Journal Title

      Virchow Arch. 447

      Pages: 717-722

    • Related Report
      2005 Annual Research Report
  • [Journal Article] DNA methylation profile in differentiated type gastric carcinoma with distinct mucin phenotypes2005

    • Author(s)
      Motoshita, J.
    • Journal Title

      Cancer Sci. 96

      Pages: 474-479

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Expression and localization of RegIV in human neoplastic and non-neoplastic tissues : RegIV expression is associated with intestinal and neuroendocrine differentiation in gastric adenocarcinoma2005

    • Author(s)
      Oue, N.
    • Journal Title

      J.Pathol. 207

      Pages: 185-198

    • Related Report
      2005 Annual Research Report
  • [Journal Article] DNA methylation of genes linked with retinoid signaling in gastric cancer : expression of retinoic acid receptor β, cellular retinal binding protein land tazarotene-induced gene 1 is associated with DNA methylation2005

    • Author(s)
      Shutoh, M.
    • Journal Title

      Cancer 104

      Pages: 1609-1619

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Molecular-pathological prognostic factor of gastric cancer : a review2005

    • Author(s)
      Yasui, W.
    • Journal Title

      Gastric Cancer 8

      Pages: 86-94

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Genes involved in invasion and metastasis of gastric cancer identified by array-based hybridization and serial analysis of gene expression2005

    • Author(s)
      Oue, N.
    • Journal Title

      Oncology 69S1

      Pages: 17-22

    • Related Report
      2005 Annual Research Report
  • [Journal Article] G1P3, an interferon inducible gene 6-16, is expressed in gastric cancers and inhibits mitochondrial-mediated apoptosis in gastric cancer cell line TMK-1 cell2005

    • Author(s)
      Tahara, E.Jr.
    • Journal Title

      Cancer Immunol.Immunother. 54

      Pages: 729-740

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Reg IV is a serum biomarker for gastric cancer patients and predicts response to 5-fluorouracil-based chemotherapy

    • Author(s)
      Mitani Y.
    • Journal Title

      Oncogene (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Book] The Diversity of Gastric Carcinoma : Pathogenesis, Diagnosis, and Therapy2005

    • Author(s)
      Yasui W
    • Total Pages
      21
    • Publisher
      Springer-Verlag
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Book] The Diversity of Gastric Carcinoma : Pathogenesis, Diagnosis, and Therapy2005

    • Author(s)
      Yasui, W.
    • Total Pages
      353
    • Publisher
      Springer-Verlag
    • Related Report
      2005 Annual Research Report

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Published: 2005-04-01   Modified: 2016-04-21  

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