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Transcriptome of mouse brain after hanging

Research Project

Project/Area Number 17390202
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Legal medicine
Research InstitutionNagasaki University

Principal Investigator

NAKASONO Ichiro  Nagasaki University, Graduate School of Biochemical Sciences, Professor, 大学院医歯薬学総合研究科, 教授 (30108287)

Co-Investigator(Kenkyū-buntansha) TSUDA Ryouichi  Nagasaki University, Graduate School of Biochemical Sciences, Lecture, 大学院医歯薬学総合研究科, 講師 (20098875)
IKEMATSU Kazuya  Nagasaki University, Graduate School of Biochemical Sciences, Associate professor, 大学院医歯薬学総合研究科, 准教授 (80332857)
Project Period (FY) 2005 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥13,500,000 (Direct Cost: ¥13,500,000)
Fiscal Year 2006: ¥4,800,000 (Direct Cost: ¥4,800,000)
Fiscal Year 2005: ¥8,700,000 (Direct Cost: ¥8,700,000)
KeywordsSAGE / Asphyxia / Hanging / Mouse / Brain / IEGs / IEG s / C-fos
Research Abstract

We investigated a transcriptome profile of mouse brain after hanging by serial analysis of gene expression (SAGE) method. RNA was extracted from the forebrain, hippocampus and cerebellum after hanging previously reported. Control groups were killed by decapitation without hanging. First, we investigated the level of immediate early genes (IEGs) mRNA such as c-fos, fos B and c-jun that induced another genes. As the results, the all IEGs drastically increased with hanging on all regions. These results indicated that transcriptome profiles might change with hanging. We have been able to obtain the transcriptome profiles after analyzing 12866 tags in hanging and 13334 tags in control. 7311 different genes in hanging and 7612 in control were observed. Compared with the two groups, 64 genes, including Ras homolog gene family member B and leucine-rich repeat neuronal 6A, were increased in hanging. On the other hand, 49 genes such as Kinesin family member C, and Phoshoprotein enriched in astrocytes 15 were decreased. These results contribute to clarify the pathophysiology of asphyxia in the lung and aid in the diagnosis of suffocation.

Report

(3 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • Research Products

    (2 results)

All Other

All Journal Article (2 results)

  • [Journal Article] Identification of novel genes expressed in hypoxic brain condition by fluorescence differential display

    • Author(s)
      Ikematsu et al.
    • Journal Title

      Forensic Sic Int (In Press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Identification of novel genes expressed in hypoxic brain condition by fluorescence differential display

    • Author(s)
      Ikematsu et al.
    • Journal Title

      Forensic Sci Int (In Press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary

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Published: 2005-04-01   Modified: 2016-04-21  

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