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Analysis of glioblastoma stem cell derived from bone marrow stem cell using high-resolution array-based comparative genomic hybridization

Research Project

Project/Area Number 17390403
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Cerebral neurosurgery
Research InstitutionSaga University

Principal Investigator

MINETA Toshihiro  Saga University, Faculty of Medicine, Associate Professor, 医学部, 講師 (20264187)

Co-Investigator(Kenkyū-buntansha) 大石 豪  佐賀大学, 医学部, 助手 (70380756)
田渕 和雄  佐賀大学, 医学部, 教授 (50116480)
香畑 智彦  佐賀大学, 医学部, 助手 (50380762)
Project Period (FY) 2005 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥15,500,000 (Direct Cost: ¥15,500,000)
Fiscal Year 2006: ¥3,500,000 (Direct Cost: ¥3,500,000)
Fiscal Year 2005: ¥12,000,000 (Direct Cost: ¥12,000,000)
Keywordsbrain tumor / glioblastoma / genomic analysis / cancer stem cell / array-CGH / array-CGH
Research Abstract

Dpite great efforts in basic life science and clinical esearch, little progress has been made in mproving the prognosis for patients with glioblastomas. urgical cure of gliomas is impossible in practice because of their high infiltrating activity. The clinical course is dependent upon the biological behavior of the tumor cells. There is increasing evidence that the accumulation of genetic and epigenetic alterations is essential for tumor initiation and progression. Conventional comparative genomic hybridization(metaphase-CGH)_4 has been widely used to screen for chromosomal gains and losses throughout the entiregenome of a tumor. Microarraybased CGH (array-CGH) is a recently developed genomicanalysis technology that enables high-throughputscreening of gene aberrations with sensitivity to detect single gene copy changes. In this study, we employed array CGH formapping of copy number alterations in glioblastomas and analyzed the potential correlation between genomic changes and prognosis … More of patients. We examined whole genomic aberrations of biopsied samples from glioblastomas by array-based comparative genomic hybridization analysis. The highest frequencies of copy number gains were observed on RFC2 (73.3%), EGFR (63.2%), and FGR, ELN, CDKN1C, FES, TOP2A, and ARSA (57.9% each). The highest frequencies of copy number losses were detected on TBR1(52.6%), BMI1 (52.6%), EGR2 (47.4%), DMBT1 (47.4%), MTAP (42.1%), and FGFR2 (42.1%). The copy numbergains of CDKN1C and INS and the copy number losses of TBR1 were significantly correlated with longer survival of patients. High-level amplifications were identified on EGFR, SAS/CDK4, PDGFRA, MDM2, and ARSA. These genes are assumed to be involved in tumorigenesis or progression of glioblastomas. The present study indicates that array-based comparative genomic hybridization analysis has great potential for assessment of copy number changes and altered chromosomal regions of brain tumors. Furthermore, we show that nonlinear analysis methods of whole genome copy number profiles may provide prognostic information about glioblastoma patients. Less

Report

(3 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • Research Products

    (20 results)

All 2007 2006 2005

All Journal Article (14 results) Book (6 results)

  • [Journal Article] Olfactory neuroepithelioma : An immunohistochemical and ultrastructural study.2006

    • Author(s)
      Sugita Y, Kusano K, et al.
    • Journal Title

      Neuropathology 26

      Pages: 400-408

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] 脳深部病変としてのグリオーマ-悪性度の高い症例の治療戦略-2006

    • Author(s)
      田渕和雄, 峯田寿裕
    • Journal Title

      Clinical Neuroscience 24

      Pages: 133-135

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Olfactory neuroepithelioma : An immunohistochemical and ultrastructural study2006

    • Author(s)
      Sugita Y, Kusano K, et al.
    • Journal Title

      Neuropathology 26

      Pages: 400-4008

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] 脳深部病変としてのグリオーマ -悪性度の高い症例の治療戦略-2006

    • Author(s)
      峯田寿裕, 田渕和雄
    • Journal Title

      CLINICAL NEUROSCIENCE 24

      Pages: 1313-135

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Olfactory neruoepithelioma : am immunohistochemical and ultrastructual study2006

    • Author(s)
      Sugita Y, et al.
    • Journal Title

      Neuropathology 26

      Pages: 400-408

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Detection of JC virus DNA sequences in brain tumors in pediatrics2005

    • Author(s)
      Okamoto H, Mineta T, et al.
    • Journal Title

      J Neurosurgery 102

      Pages: 294-298

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] グリアの腫瘍化機序2005

    • Author(s)
      田渕和雄, 峯田寿裕
    • Journal Title

      Clinical Neuroscience 23

      Pages: 368-372

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary 2005 Annual Research Report
  • [Journal Article] Detection of JC virus sequences in brain tumors in pediatrics2005

    • Author(s)
      Okamoto H, Mineta T, et al.
    • Journal Title

      Journal of Neurosurgery 102

      Pages: 294-298

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Peritoneal shunt tube migration into the stomach-case report-2005

    • Author(s)
      Masuoka J, Mineta T, et al.
    • Journal Title

      Neurol Med Chir (Tokyo) (Tokyo) 45

      Pages: 543-546

    • NAID

      110002556715

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Detection of JC virus DNA sequences in brain tumors in pediatric patients2005

    • Author(s)
      Okamoto H, et al.
    • Journal Title

      Journal of Neurosurgery 102

      Pages: 294-298

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Peritoneal shunt tube migration into the stomach2005

    • Author(s)
      Masuoka J, et al.
    • Journal Title

      Neurologia medicho-chirurgica 45

      Pages: 543-546

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Individual adult human neurons display aneuploidy : detection by fluorescence in situ hybridization and single neuron PCR2005

    • Author(s)
      Pack SD, et al.
    • Journal Title

      Cell Cycle 4

      Pages: 1758-1760

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Coexpression of erythropoietin and its receptor in endolymphatic sac tumors2005

    • Author(s)
      Vogel TW, et al.
    • Journal Title

      Journal of Neurosurgery 103

      Pages: 284-288

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Proteins and protein pattern differences between glioma cell lines and glioblastoma multiforme2005

    • Author(s)
      Vogel TW, et al.
    • Journal Title

      Clinical Cancer Research 15

      Pages: 3624-3632

    • Related Report
      2005 Annual Research Report
  • [Book] EBM 神経疾患の治療(岡本幸一、棚橋紀夫、水澤英洋(編))2007

    • Author(s)
      峯田寿裕, 田渕和雄
    • Total Pages
      534
    • Publisher
      中外医学者
    • Related Report
      2006 Annual Research Report
  • [Book] グリオーマ-病態と治療- ウイルスのゲノム検索2006

    • Author(s)
      峯田寿裕, 田渕和雄
    • Total Pages
      6
    • Publisher
      シュプリンガー・フェアラーク東京
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Book] EBM 神経疾患の治療2006

    • Author(s)
      峯田寿裕, 田渕和雄
    • Total Pages
      5
    • Publisher
      中外医学社
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Book] グリオーマ : 病態と治療 : ウィルスのゲノム検索(田渕和雄(編))2006

    • Author(s)
      峯田寿裕, 田渕和雄
    • Total Pages
      274
    • Publisher
      シュプリンガー。フェアラーク東京
    • Related Report
      2006 Annual Research Report
  • [Book] グリオーマ 病態と治療2006

    • Author(s)
      田渕 和雄
    • Total Pages
      274
    • Publisher
      シュプリンガー・フェアラーク東京
    • Related Report
      2005 Annual Research Report
  • [Book] わかりやすい疾患と処方薬の解説-脳腫瘍-2005

    • Author(s)
      峯田寿裕, 田渕和雄
    • Total Pages
      2
    • Publisher
      アークメディア
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary

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Published: 2005-04-01   Modified: 2016-04-21  

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