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Comprehensive analysis of gene expression mediated by food components

Research Project

Project/Area Number 17500533
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Eating habits, studies on eating habits
Research InstitutionOchanomizu University

Principal Investigator

OTSUKA Yuzuru  Institute of environmental science for human life, Professor, 生活環境研究センター, 教授 (20135833)

Co-Investigator(Kenkyū-buntansha) SATAKE Motoyoshi  Institute of environmental science for human life, invited Professor, 生活環境研究センター, 客員教授 (10170713)
Project Period (FY) 2005 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥3,500,000 (Direct Cost: ¥3,500,000)
Fiscal Year 2006: ¥1,300,000 (Direct Cost: ¥1,300,000)
Fiscal Year 2005: ¥2,200,000 (Direct Cost: ¥2,200,000)
KeywordsDNA microarray / food component / gene expression / comprehensive analysis / HepG2 / DNAマイクロアレー / パスウェイ解析
Research Abstract

HepG2 cells and HUC-F2 cells were grown to 70% confluent. The cells were treated with various food constituents 4 hours. The RNA was extracted from the cells, and cDNA was synthesized by revers-transcriptase. During the RT reaction, DIG labeled RNA was synthesized. The samples were hybridized to human DNA micro-array, and the array was measured by ABI DNA microarray reader. The data were analyzed by spot fire software. About 3000 gene was up regulated by hydrogen peroxide treatment, and the 2000 genes were down regulated. Vitamin E was added to the medium at the same time with hydrogen peroxide, and the vitamin was decreased the gene expression activated by hydrogen peroxide. Those data suggested the vitamin E showed antioxidant activity at molecular level. The same reaction was observed by the PQQ treatment. MAPKinasae pathway etc. was upregulated by hydrogen peroxide treatment. Many other pathway was also upregulated. The effect of mother milk and vitamin c was also analyzed.

Report

(3 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • Research Products

    (6 results)

All 2006

All Journal Article (6 results)

  • [Journal Article] A new method of competitive reverse transcription - polymerase chain reaction with SYBR Gold staining for quantitative analysis of mRNA2006

    • Author(s)
      Rieko Oba, Yasuko Kudo, Naomi Sato, Reiko Noda, Yuzuru Otsuka
    • Journal Title

      Electrophoresis 27

      Pages: 2865-2868

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] ハーブオイルの酸化安定性2006

    • Author(s)
      植木彩子, 大塚 譲, 今井悦子
    • Journal Title

      日本家政学会誌 57

      Pages: 403-410

    • NAID

      110004745074

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] A new method of competitive reverse transcription-polymerase chain reaction with SYBR Gold staining for quantitative analysis of mRNA2006

    • Author(s)
      Rieko Oba, Yasuko Kudo, Naomi Sato, Reiko Noda, Yuzuru Otsuka
    • Journal Title

      Electrophoresis 27

      Pages: 2865-2868

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Oxidant stability of hrabal oils2006

    • Author(s)
      Saiko Ueki, Yuzuru Otsuka, Etsuko Imai
    • Journal Title

      Japanese J.Home Economics 57

      Pages: 403-410

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] ハーブオイルの酸化安定性2006

    • Author(s)
      植木彩子, 大塚 譲, 今井悦子
    • Journal Title

      家政学会誌 57

      Pages: 403-410

    • NAID

      110004745074

    • Related Report
      2006 Annual Research Report
  • [Journal Article] A new method of competitive reverse transcription polymerase chain reaction with SYBR Gold Staining for quantitative analysis of mRNA.2006

    • Author(s)
      Rieko Oba, Yasuko Kudo, Naomi Sato, Reiko Noda, Yuzuru Otsuka
    • Journal Title

      Electrophoresis (印刷中)

    • Related Report
      2005 Annual Research Report

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Published: 2005-04-01   Modified: 2016-04-21  

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