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Regulation of the nucleus and chromosomes by the ubiquitin-family proteins

Research Project

Project/Area Number 17510166
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied genomics
Research InstitutionKumamoto University

Principal Investigator

SAITOH Hisato  Kumamoto University, Graduate School of Science and Technology, Professor (50211925)

Project Period (FY) 2005 – 2007
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥3,600,000 (Direct Cost: ¥3,600,000)
Fiscal Year 2006: ¥1,700,000 (Direct Cost: ¥1,700,000)
Fiscal Year 2005: ¥1,900,000 (Direct Cost: ¥1,900,000)
Keywordsprotein / signaling / biomolecule / development / differentiation / gene / 生物・生体工学 / ユビキチン / SUMO / 翻訳後修飾
Research Abstract

SUMOs are small ubiquitin-related modifiers that can covalently attach to target proteins, a process referred to as sumoylation. It has become increasingly clear that a wide variety of cellular proteins can be regulated by sumoylation. It is of interest that, in contrast to ubiquitin, there are at least three SUMO paralogs in human cells, SUMO2, SUMO3 and SUMO1, and SUMO2 and SUMO3 are more related to each other (95% amino acid identity) than they are to SUMO1 (〜50% identity).
In this research project, we first show our current data that indicate quantitative and biochemical distinction between SUMO2/3 and SUMO1 and would like to discuss functional heterogeneity of SUMO2/3 versus SUMO1 in cellular growth and during early development.
We also would like to focus on the role of SUMO2/3 in heterochromatin formation in mammalian cells. We show that human MCAF1 which complexes with methyl-CpG-binding protein MBD1, and SETDB1 that trimethylates histone H3 at lysine 9 (H3-K9) in the presence of MCAF1, both directly bind to SUMO2/3 via short peptide sequences similar to the SUMO-binding motif. We also indicate sumoylation of MBD1 both in vitro and in vivo and demonstrate that modification of MBD1 with SUMO2/3 facilitates an interaction among MBD1, MCAF1 and SETDB1, suggesting that sumoylation links methylation of DNA and histone. In a cultured human cancer cell line, SUMO2/3 are enriched in MBD1 and MCAF1-containing heterochromatin regions that are marked with trimethyl H3-K9 and its binding protein HP1. The specific knockdown of SUMO2/3 induces the dissociation of MCAF1, trimethyl H3-K9, and HP1 from the MBD1-containing heterochromatin foci, suggesting the requirement of SUMO2/3 for assembly of the heterochromatin proteins. These findings imply SUMO2/3's function as an epigenetic modulator for heterochromatin formation, at least in part, via regulating MCAF1-SETDB1-MBD1 interaction.

Report

(3 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • Research Products

    (17 results)

All 2007 2006 2005 Other

All Journal Article (16 results) Book (1 results)

  • [Journal Article] Noncovalent binding of small ubiquitin-related modifier (SUMO) protease to SUMO is necessary for enzymatic activities and cell growth.2007

    • Author(s)
      Ihara, et al.
    • Journal Title

      J. Biol. Chem. 282

      Pages: 16465-16475

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Noncovalent binding of small ubiquitin-related modifier (SUMO) protease to SUMO is necessary for enzymatic activities and cell growth.2007

    • Author(s)
      Ihara, et. al.
    • Journal Title

      J. Biol. Chem. 282

      Pages: 16465-16475

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Inhibition of DNA binding of Sox2 by the SUMO conjugation.2006

    • Author(s)
      Tsuruzoe, et al.
    • Journal Title

      Biochem. Biophys. Res. Commun. 351

      Pages: 920-926

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] SUMO downregulates the activity of Elf4.2006

    • Author(s)
      Suico, et al.
    • Journal Title

      Biochem. Biophys. Res. Commun. 348

      Pages: 880-888

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Involvement of SUMO modification in MBD1 and MCAF1 mediated heterochromatin formation.2006

    • Author(s)
      Uchimura, et al.
    • Journal Title

      J. Biol. Chem. 281

      Pages: 23180-23190

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] In situ Sumoylation analysis reveals a modulatory role of RanBP2 in the nuclear rim and PML bodies.2006

    • Author(s)
      Saitoh, et al.
    • Journal Title

      Exp. Cell Res. 312

      Pages: 1418-1430

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] MafG sumoylation is required for active transcriptional repression.2006

    • Author(s)
      Motohashi, et al.
    • Journal Title

      Mol. Cell. Biol. 26

      Pages: 4652-4663

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Inhibition of DNA binding of Sox2 by the SUMO conjugation.2006

    • Author(s)
      Tsuruzoe, et al.
    • Journal Title

      Biochem. Biophys. Res. Commun 351

      Pages: 920-926

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] SUMO downregulates the activity of Elf42006

    • Author(s)
      Suico, et al.
    • Journal Title

      Biochem. Biophys. Res. Commun. 348

      Pages: 880-888

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Inhibition of DNA binding of Sox2 by the SUMO conjugation.2006

    • Author(s)
      Tsuruzoe, et. al.
    • Journal Title

      Biochem. Biophys. Res. Commun. 351

      Pages: 920-926

    • Related Report
      2006 Annual Research Report
  • [Journal Article] SUMO downregulates the activity of Elf4.2006

    • Author(s)
      Suico, et. al.
    • Journal Title

      Biochem. Biophys. Res. Commun. 348

      Pages: 880-888

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Involvement of SUMO modification in MBD1 and MCAF1 mediated heterochromatin formation.2006

    • Author(s)
      Uchimura, et. al.
    • Journal Title

      J. Biol. Chem. 281

      Pages: 23180-23190

    • Related Report
      2006 Annual Research Report
  • [Journal Article] In situ Sumoylation analysis reveals a modulatory role of RanBP2 in the nuclear rim and PML bodies.2006

    • Author(s)
      Saitoh, et. al.
    • Journal Title

      Exp. Cell Res. 312

      Pages: 1418-1430

    • Related Report
      2006 Annual Research Report
  • [Journal Article] In situ SUMOylation analysis reveals a modulatory role of RanBP2 in the nuclear rim and PML bodies.2006

    • Author(s)
      N.Saitoh et al.
    • Journal Title

      Exp.Cell Res. 印刷中

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Structure of SUMO1-conjugated thymine DNA glycosidase provides mechanistic insight into DNA product release and functional protein transfer.2005

    • Author(s)
      D.Baba et al.
    • Journal Title

      Nature 435

      Pages: 979-982

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Noncovalent SUMO-1 binding activity of thymine DNA glycosylase (TDG) is required for its SUMO-1 modification and colocalization with the promyelocytic leukemia protein(PML).2005

    • Author(s)
      H.Takahashi et al.
    • Journal Title

      J.Biol.Chem. 280

      Pages: 5611-5621

    • Related Report
      2005 Annual Research Report
  • [Book] Methods in Molecular Biology

    • Author(s)
      H. Saitoh, et al.
    • Publisher
      Humana Press(In press)
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary

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Published: 2005-04-01   Modified: 2016-04-21  

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