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Creation of the Intermolecular Disulfide Bonded Crystal to Observe Tertiary Structures in Different Solvent Conditions

Research Project

Project/Area Number 17510186
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Living organism molecular science
Research InstitutionQuantum Beam Science Directorate, Japan Atomic Energy Agency

Principal Investigator

KUROKI Ryota  Quantum Beam Science Directorate, Japan Atomic Energy Agency, Principal Scientist, 量子ビーム応用研究部門, 研究主幹 (30391246)

Co-Investigator(Kenkyū-buntansha) TAMADA Taro  Quantum Beam Science Directorate, Japan Atomic Energy Agency, Senior Researcher, 量子ビーム応用研究部門, 研究副主幹 (50391248)
ADACHI Motoyasu  Quantum Beam Science Directorate, Japan Atomic Energy Agency, Researcher, 量子ビーム応用研究部門, 研究員 (60293958)
Project Period (FY) 2005 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥2,500,000 (Direct Cost: ¥2,500,000)
Fiscal Year 2006: ¥1,100,000 (Direct Cost: ¥1,100,000)
Fiscal Year 2005: ¥1,400,000 (Direct Cost: ¥1,400,000)
Keywordsdisulfide bond / T4 phage lysozyme / x-ray crystallography / protein engineering
Research Abstract

In order to observe tertiary structures in different solvent conditions, intermolecular disulfide cross-link was designed into T4 phage lysozyme (T4L). Since the wild type T4L is crystallized into the space group of P3221, a mutant T4L(SNAT-T4L) in which the four residues, Ser44, Asn68, Ala93, and Thrll5, located at the crystal contacts of T4L were mutated to cysteines, so that every neighbor protein can be linked by disulfide bridges. The mutant SNAT-T4L was successfully prepared as a monomer protein at the reduced condition. Then the SNAT-T4L was crystallized to the same space group. The obtained crystal diffracted to 1.5 A resolution at the cryogenic condition in the same buffer system as crystallized. The crystal diffracted after transferring to several different pHs from 4 to 10. Although the crystal diffract neither in simple water nor in 30% DMSO solution, it diffracted well after replacing the solution with the 50mM sodium phosphate buffer (pH7) containing 100mM sodium chloride and 30% glycerol solution. The crystal was stable enough to exchange mother liquor to other solution containing organic solvent, suggesting the possibility of the reutilization of the protein crystal.

Report

(3 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • Research Products

    (7 results)

All 2007 2006 2005 Other

All Journal Article (6 results) Book (1 results)

  • [Journal Article] "Crystal Lattice Engineering" an approach to engineer protein crystal contacts by creating intermolecular symmetry : Crystallization and structure determination of a mutant human RNase 1 with a hydrophobic interface of leucines2007

    • Author(s)
      Yamada et al.
    • Journal Title

      Protein Science (in press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Crystal Lattice Engineering an approach to engineer protein crystal contacts by creating intermolecular symmetry : Crystallization and structure determination of a mutant human RNase 1 with a hydrophobic interface of leucines2007

    • Author(s)
      Yamada et al.
    • Journal Title

      Protein Science (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] 生体高分子の立体構造を精密に調べる2006

    • Author(s)
      黒木良太
    • Journal Title

      月刊エネルギー 39

      Pages: 71-73

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Creation of the Intermolecular Disulfide Bonded Crystal to Observe Tertiary Structures in Different Solvent Conditions

    • Author(s)
      kuroki et al.
    • Journal Title

      manuscript (in preparation)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Tertiary Structure Analysis of Biomacromolecules

    • Author(s)
      Ryota Kuroki
    • Journal Title

      Energy 39(in Japanese)

      Pages: 71-73

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Creation of the Intermolecular Disulfide Bonded Crystal to Observe Tertiary Structures in Different Solvent Conditions

    • Author(s)
      Kuroki et al.
    • Journal Title

      (manuscript in preparation)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Book] タンパク質の発現系(タンパク質科学イラストレーテッド(竹縄忠臣 編))2005

    • Author(s)
      本庄栄二郎, 黒木良太(分担)
    • Publisher
      羊土社
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary

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Published: 2005-04-01   Modified: 2016-04-21  

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