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Development of high precision method to detect amyloid formation for Alzheimer's disease

Research Project

Project/Area Number 17550085
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Analytical chemistry
Research InstitutionTokyo University of Pharmacy and Life Science

Principal Investigator

TASHIRO Sakurako  Tokyo University of Pharmacy and Life Science, School of Pharmacy, Lecturer (40328555)

Co-Investigator(Kenkyū-buntansha) KOJIMA Masaki  Iwate Medical University, School of Pharmacy, Associate Professor (90277252)
TASHIRO Mitsuru  Meisei University, Faculty of Science and Technology, Associate Professor (40315750)
Project Period (FY) 2005 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥3,510,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥210,000)
Fiscal Year 2007: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2006: ¥1,100,000 (Direct Cost: ¥1,100,000)
Fiscal Year 2005: ¥1,500,000 (Direct Cost: ¥1,500,000)
Keywordsamyloid fibrils / Alzheimer's disease / familial Parkinson's disease / α-synuclein / intermediate / アミロイド / NACP
Research Abstract

NAC (Non-Aβ-Component of amyloid) was identified as one of the component in amyloid fibril for Alzheimer's disease during the purification process of amyloid fibrils. Later its precursor protein, α-synuclein was cloned. Moreover, the point mutations of this precursor protein (A30P, A53T, E46K) were identified in the confirmed familial cases of autosomal-dominantly inherited, early-onset Parkinson's disease(PD). Now α-synuclein is used as an marker protein for Lewy bodies in PD patient in order to diagnose the disease.
In this study, we have attempted to examine the structural changes during the early stages of amyloid formation and also the effects of point mutations mentioned above using thioflavin T fluorescence, CD, NMR, small angle X-ray scattering (SAXS), and electron microscopy in order to elucidate the fibrillation mechanisms at an atomic or molecular level.
SVD analysis of CD and SAXS data obtained during amyloid formation of α-synuclein has revealed the possible existence of intermediate during the early stage of amyloid formation. Also the analysis of 1H-15N HSQC spectra at the early stage of fibrillation indicated the decrease in peak intensities corresponding to KTKEGV motif. As the decrease in peak intensities could be correlated to increase in molecular weight, KTKEGV regions might be involved in the early stage of fibril formations. Furthermore, the detailed SVD analysis of SAXS data showed possibility of the early stage intermediate being heptamer.

Report

(4 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • 2005 Annual Research Report
  • Research Products

    (28 results)

All 2008 2007 2005

All Journal Article (19 results) (of which Peer Reviewed: 9 results) Presentation (8 results) Book (1 results)

  • [Journal Article] Characterization of Fibrillation Process of α-Synuclein at the initial stage2008

    • Author(s)
      Tashiro M, Kojima M, Kihara, H., Kasai, K., Kamiyoshihara T, Ueda K, Shimotakahara S.
    • Journal Title

      Biochem Biophys Res Commun 369

      Pages: 910-914

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Review: Protein Sample Preparation for Structural Biology2008

    • Author(s)
      Shimotakahara S.
    • Journal Title

      Bunseki 4

      Pages: 178-182

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Characterization of Fibrillation Process of α-Synuclein at the initial stage2008

    • Author(s)
      Tashiro, M., Kojima, M., Kihara, H., Kasai, K., Kamiyoshihara, T., Ueda, K., Shimotakahara, S
    • Journal Title

      Biochem Biophys Res Commun 369

      Pages: 910-914

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Review : Protein Sample Preparation for Structural Biology2008

    • Author(s)
      Shimotakahara (Tashiro), S
    • Journal Title

      Bunseki 4

      Pages: 178-182

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Characterization of Fibrillation Process of a-Synuclein at the initial stage2008

    • Author(s)
      Tashiro M, Kojima M, Kihara, H., Kasai, K., Kamiyoshihara T, Ueda K, Shimotakahara S.
    • Journal Title

      Biochem Biophys Res Commun (in press)

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 構造生物学におけるタンパク質の調製方法2008

    • Author(s)
      Tashiro S.
    • Journal Title

      「ぶんせき」-進歩総説 (in press)

    • Related Report
      2007 Annual Research Report
  • [Journal Article] Obseration of multiple intermediates in alpha-synuclein fibril formation by singular value decomposition analysis2007

    • Author(s)
      Kamiyoshihara T, Kojima M, Ueda K, Tashiro M, Shimotakahara S.
    • Journal Title

      Biochem Biophys Res Commun 355

      Pages: 398-403

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Expression and characterization of a pleckstrin homology domain in phospholipase C, PLC_η 12007

    • Author(s)
      Imai, Toru; Kasai, Kouki; Kurita, Junichi; Fukami, Kiyoko; Tashiro, Mitsuru; Shimotakahara, Sakurako
    • Journal Title

      Protein Expression and Purification 56

      Pages: 247-252

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Collective solvent flows around a protein investigated by molecular dynamics simulation2007

    • Author(s)
      Umezawa K, Higo J, Shimotakahara S, Shindo H.
    • Journal Title

      J Chem Phys 127

      Pages: 45101-45107

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Observation of multiple intermediates in alpha-synuclein fibril formation by singular value decomposition analysis2007

    • Author(s)
      Kamiyoshihara, T., Kojima, M., Ueda, K., Tashiro, M., Shimotakahara, S
    • Journal Title

      Biochem Biophys Res Commun 355(2)

      Pages: 398-403

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Expression and characterization of a pleckstrin homology domain in phospholipase C, PLCη 12007

    • Author(s)
      Imai, Toru ; Kasai, Kouki ; Kurita, Junichi ; Fukami, Kiyoko ; Tashiro, Mitsuru ; Shimotakahara, Sakurako
    • Journal Title

      Protein Expression and Purification 56(2)

      Pages: 247-252

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Collective solvent flows around a protein investigated by molecular dynamics simulation2007

    • Author(s)
      Umezawa, K., Higo, J., Shimotakahara, S., Shindo, H
    • Journal Title

      J Chem Phys 127(4)

      Pages: 45101-45101

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Observation of multiple intermediates in alpha-synuclein fibril formation by singular value decomposition analysis2007

    • Author(s)
      Kamiyoshihara T, Kojima M, Ueda K, Tashiro M, Shimotakahara S.
    • Journal Title

      Biochem Biophys Res Commun 355

      Pages: 398-403

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Expression and characterization of a pleckstrin homology domain in phospholipase C, PLC-η 1.2007

    • Author(s)
      Imai, Toru; Kasai, Kouki; Kurita, Junichi; Fukami, Kiyoko; Tashiro, Mitsuru; Shimotakahara, Sakurako
    • Journal Title

      Protein Expression and Purification 56

      Pages: 247-252

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Collective solvent flows around a protein investigated by molecular dynamics simulation.2007

    • Author(s)
      Umezawa K, Higo J, Shimotakahara S, Shindo H.
    • Journal Title

      J Chem Phys 127

      Pages: 45101-7

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Observation of Water Molecules Bound to a Protein Using Cold-Spray Ionization Mass Spectrometry2005

    • Author(s)
      Y.Sei, S.Shimotakahara, J.Ishii, H.Shindo, H.Seki, K.Yamaguchi, M.Tashiro
    • Journal Title

      Anal.Sci. 21

      Pages: 449-451

    • NAID

      10015513763

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Observation of water molecules bound to a protein using cold-spray ionization mass spectrometry2005

    • Author(s)
      Sei, Y., Shimotakahara, S., Ishii, J., Shindo, H., Seki, H., Yamaguchi, K., Tashiro, M
    • Journal Title

      Anal. Sci 21

      Pages: 449-451

    • NAID

      10015513763

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Observation of water molecules bound to a protein using cold-spray ionization mass spectrometry2005

    • Author(s)
      Sei, Y
    • Journal Title

      Analytical Science 21

      Pages: 449-451

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Application of NMR screening techniques for observing ligand binding with a protein receptor.2005

    • Author(s)
      Shimotakahara, S
    • Journal Title

      Magnetic Resonance Chemistry 43

      Pages: 69-72

    • Related Report
      2005 Annual Research Report
  • [Presentation] 蛋白質周辺における水分子の流れ、分子動力学計算による解析2007

    • Author(s)
      梅澤 公二, 肥後 順一, 山岸 明彦, 田代(下高原) 桜子, 神藤 平三郎
    • Organizer
      第45回日本生物物理学会年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2007-12-21
    • Related Report
      2007 Annual Research Report
  • [Presentation] uilibrium intermediate and transient intermediate of src SH3 and its mutant2007

    • Author(s)
      Jin Xianju, Li Jinsong, 松村 義隆, 新庄 正路, 笠井 恒希, 田代(下高原) 櫻子, 木原 裕
    • Organizer
      第45回日本生物物理学会年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2007-12-21
    • Related Report
      2007 Annual Research Report
  • [Presentation] パーキンソン病原因タンパク質alpha-synucleinのアミロイド線維形成の解析2007

    • Author(s)
      田代 充・田代 桜子・上吉原 智晃・小島 正樹・上田 健冶
    • Organizer
      第68回分析化学討論会
    • Place of Presentation
      宇都宮大学峰キャンパス
    • Year and Date
      2007-05-19
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Annual Research Report 2007 Final Research Report Summary
  • [Presentation] Analysis of amyloid formation mechanism using alpha-synuclein from Parkinson's disease2007

    • Author(s)
      Tashiro, M., Shimotakahara, Tashiro, S., Kamiyoshihara, T., Kojima, M., Ueda, K
    • Organizer
      68th Analytical Chemistry Forum
    • Place of Presentation
      University of Utsunomiya, Japan
    • Year and Date
      2007-05-19
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] パーキンソン病原因タンパク質a-synucleinのアミロイド線維形成の解析2007

    • Author(s)
      田代 櫻子, 上吉原 智晃, 小島 正樹, 上田 健治, 田代 充
    • Organizer
      日本薬学会第129年会
    • Place of Presentation
      富山
    • Year and Date
      2007-03-29
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Study of amyloid formation mechanism using alpha-synuclein from Parkinson's disease2007

    • Author(s)
      Shimotakahara, Tashiro, S., Kamiyoshihara, T., Kojima, M., Ueda, K., Tashiro, M.
    • Organizer
      129th Annual Pharmacy Society Meeting
    • Place of Presentation
      Toyama, Japan
    • Year and Date
      2007-03-29
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] パーキンソン病関連タンパク質a-synucleinにおけるアミロイド形成機構の解明2005

    • Author(s)
      上吉原 智晃, 小島 正樹, 宮本 怜, 上田 健治, 田代 充, 神藤 季三郎, 下高原 桜子
    • Organizer
      第28回日本分子生物学会年会
    • Place of Presentation
      福岡
    • Year and Date
      2005-12-07
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Analysis of amyloid formation mechanism using alpha-synuclein from Parkinson's disease2005

    • Author(s)
      Kamiyoshihara, T., Kojima, M., Miyamoto, R., Ueda, K., Tashiro, M., Shindo, H., Shimotkahara, S
    • Organizer
      28th Annual Molecular Biology Society Meeting
    • Place of Presentation
      Fukuoka, Japan
    • Year and Date
      2005-12-07
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Book] 薬学生のための分析化学第3版2008

    • Author(s)
      岩木 和夫, 楠 文代, 渋澤 庸一, 田代 桜子, 田辺 顕子, 大和 進
    • Total Pages
      327
    • Publisher
      廣川書店
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary

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Published: 2005-04-01   Modified: 2016-04-21  

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