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Molecular Dynamics in Lipid Rafts by High-Sensitivity, High-Resolution NMR

Research Project

Project/Area Number 17550153
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Chemistry related to living body
Research InstitutionKYOTO UNIVERSITY

Principal Investigator

OKAMURA Emiko  Kyoto University, Institute for Chemical Research, Associate Professor, 化学研究所, 助手 (00160705)

Co-Investigator(Kenkyū-buntansha) NAKAHARA Masaru  Kyoto University, Institute for Chemical Research, Professor, 化学研究所, 教授 (20025480)
Project Period (FY) 2005 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥2,800,000 (Direct Cost: ¥2,800,000)
Fiscal Year 2006: ¥1,100,000 (Direct Cost: ¥1,100,000)
Fiscal Year 2005: ¥1,700,000 (Direct Cost: ¥1,700,000)
Keywordscholesterol / lipid raft / dynamics / solution NMR / aggregate / biophysics / diffusion / NOESY / 2次元NMR / 自己組織化
Research Abstract

Cholesterol is involved in the formation of dynamic microdomains referred to as lipid rafts in the membrane. Because the inside of a lipid domain is nonpolar and aprotic, it is of great interest to examine how cholesterol molecules are dissolved in low-polarity aprotic organic solvents that mimic the hydrophobic core of a phospholipid bilayer. Self-diffusion coefficients (D) are measured for normal (nondeuterated) and deuterated cholesterol in 1-octanol, chloroform, and cyclohexane at concentrations of 1-700 mM. The pulsed field gradient spin-echo (PGSE) ^1H and ^2H NMR were used, respectively, at 600 and 92 MHz. The hydrodynamic radius (R) obtained from D is the smallest in 1-octanol and it is comparable with the average length of the molecular axes for the cholesterol molecule. In 1-octanol, R is invariant against the concentration variation, whereas in chloroform, R is larger and increases almost linearly with cholesterol concentration. The R value larger than that in hydrogen-bonding 1-octanol indicates that cholesterol forms an aggregate through hydrogen bonding. The aggregate structure is confirmed by comparing NOESY spectra in chloroform and 1-octanol. The NOESY analysis reveals the presence of one extra cross peak (C4-C19) in chloroform compared to 1-octanol. Because the carbon atoms related to the cross peak are close to the hydroxyl group (C3-OH), cholesterol molecules are considered to be not piled but OH centered in the aggregate. This is supported also by larger rotational hydrodynamic radii measured on cholesterol deuterated at positions C2, C3, C4, and C6. This shows that the aggregate formation is driven by the hydrogen bonding between cholesterol molecules.

Report

(3 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • Research Products

    (4 results)

All 2006 2005

All Journal Article (4 results)

  • [Journal Article] Dynamic and 2D NMR Studies on Hydrogen-bonding Aggregates of Cholesterol in Low-polarity Organic Solvents2006

    • Author(s)
      Cristiano Giordani et al.
    • Journal Title

      Journal of Physical Chemistry B 110

      Pages: 15205-15211

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Real-Time In-Cell ^<19>F NMR Study on Uptake of Fluorescent and Nonfluorescent ^<19>F-Octaarginines into Human Jurkat Cells2005

    • Author(s)
      Emiko Okamura et al.
    • Journal Title

      Chemistry Letters 34

      Pages: 1064-1065

    • NAID

      10016469741

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary 2005 Annual Research Report
  • [Journal Article] Mobility and Location of Anesthetics in Lipid Bilayer Membranes by High-Resolution, High-Field-Gradient NMR2005

    • Author(s)
      Emiko Okamura et al.
    • Journal Title

      International Congress Series 1283

      Pages: 203-206

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary 2005 Annual Research Report
  • [Journal Article] Mobility and Location of Anesthetics in Lipid Bilayer Membranes by High-Resolution, High-Field- Gradient NMR2005

    • Author(s)
      Emiko Okamura et al.
    • Journal Title

      International Congress Series 1283

      Pages: 203-206

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary

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Published: 2005-04-01   Modified: 2016-04-21  

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