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Genetic and population structure of the least shrews Sorex minutissimus in Eurasia

Research Project

Project/Area Number 17570009
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Ecology/Environment
Research InstitutionHokkaido University

Principal Investigator

OHDACHI Satoshi  Hokkaido Univ., Institute of Low Temperature Science, Assistant Professor, 低温科学研究所, 助手 (60292041)

Project Period (FY) 2005 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥3,600,000 (Direct Cost: ¥3,600,000)
Fiscal Year 2006: ¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 2005: ¥2,200,000 (Direct Cost: ¥2,200,000)
KeywordsSorex minutissimus / cytochrome b / control region / genetic variation / geographic variation / phylogeography / 生息地分断化 / マイクロサテライト遺伝子
Research Abstract

In 2005, samples obtained from reserved specimens and those captured by myself is as follows : 15 specimens from Finland, 1 from Norway, 1 from Kamchatka, 4 from Magadan region (Russia), 5 from Primorski, 1 from Khabarovsk region, 2 from Sakhalin, 1 from Kunashiri Island, 11 from Satobetsu (Hokkaido), 5 from Nemuro, 2 from Hamanaka-cho, and 5 from Kenbokki Island. In 2006, 12 shrews from Shiranuka-cho (Hokkaido), 1 from Sarufutsu-mura, and 1 from northern Mongolia were captured by myself. According to the sampling, new knowledge about habitat of Sorex minutissimus was obtained. Sorex minutissimus was captured in sand dune and rocky place, which are rarely used by other shrew species. Thus, it is suggested that S. minutissimus might be pushed to unpreferable habits by other competitively dominant species.
Phylogenetic investigation was conducted based on sequences of the mitochondrial cytochrome b and the control region. Populations genetically rather differentiated between the eastern and western parts of Eurasia. In addition, within the eastern Eurasian population, genetic diversification was observed, corresponding to geographic position. There was little genetic variation within Hokkaido population whereas there was much genetic variation within Finnish population although sampling area were almost the same between the two. The low genetic variation in Hokkaido population may be the result of a recent bottleneck event of population. The high variation in Finland may have been related to continental ice sheet development in the last glacial age. In the last glacial age, northern Europe was covered with ice sheet. Thus, Finnish S. minutissimus might have retreated to several refugia and returned to the Finland from several regions after warming, causing a genetic mixture of various haplotypes.

Report

(3 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • Research Products

    (16 results)

All 2007 2006 2005 Other

All Journal Article (14 results) Book (2 results)

  • [Journal Article] Molecular phylogenetics of shrews (Mammalia : Soricidae) reveal timing of transcontinental colonizations2007

    • Author(s)
      Dubey, S.
    • Journal Title

      Molecular Phylogenetics and Evolution (in press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Molecular phylogenetics of soricid shrews (Mammalia) based on mitochondrial cytochrome b gene sequences : with special reference to the Soricinae2006

    • Author(s)
      Ohdachi, S. D.
    • Journal Title

      Journal of Zoology 270

      Pages: 177-191

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Population genetic structures of Sorex unguiculatus and S. caecutiens (Soricidae, Mammalia) in Hokkaido, based on microsatellite DNA polymorphism2006

    • Author(s)
      Naitoh, Y.
    • Journal Title

      Ecological Research 21

      Pages: 586-596

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] 2006. Molecular phylogenetics of soricid shrews (Mammalia) based on mitochondrial cytochrome b gene sequences : with special reference to the Soricinae2006

    • Author(s)
      Ohdachi, S.D., M.Hasegawa, M, A.Iwasa, H.Abe, P.Vogel, T.Oshida, L.-K.Lin.
    • Journal Title

      Journal of Zoology 270

      Pages: 177-191

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Population genetic structures of Sorex unguiculatus and S. caecutiens (Soricidae, Mammalia) in Hokkaido, based on microsatellite DNA polymorphism2006

    • Author(s)
      Naitoh, Y., S.D.Ohdachi.
    • Journal Title

      Ecological Research 21

      Pages: 586-596

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Molecular phylogenetics of soricid shrews (Mammalia) based on mitochondrial cytochrome b gene sequences : with special reference to the Soricinae2006

    • Author(s)
      Ohdachi, S.D., M.Hasegawa, M, A.Iwasa, H.Abe, P.Vogel, T.Oshida, L.-K.Lin
    • Journal Title

      Journal of Zoology 270

      Pages: 177-191

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Genetic structures of Sorex unguiculatus and S. caecutiens (Soricidae, Mammalia) in Hokkaido, based on microsatellite DNA polymorphism2006

    • Author(s)
      Naitoh, Y., S.D.Ohdachi
    • Journal Title

      Ecological Research 21

      Pages: 586-596

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Morphological relationships among populations in the Sorex caecutiens/shinto group (Eulipotyphla, Soricidae) in East Asia, with description of a new subspecies from Cheju Island, Korea2005

    • Author(s)
      Ohdachi, S. D.
    • Journal Title

      Mammalian Biology 70

      Pages: 345-358

    • NAID

      120000953506

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Restriction fragment length polymorphism of nuclear rDNA in Sorex caecutiens/shinto group (Eulipotyphla, Soricidae)2005

    • Author(s)
      Naitoh, Y.
    • Journal Title

      Mammamal Study 30

      Pages: 101-107

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Morphological relationships among populations in the Sorex caecutiens/Shinto group (Eulipotyphla, Soricidae) in East Asia, with description of a new subspecies from Cheju Island, Korea2005

    • Author(s)
      Ohdachi, S.D., H.Abe, H.S.Oh, S.H.Han.
    • Journal Title

      Mammalian Biology. 70

      Pages: 345-358

    • NAID

      120000953506

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] 2005. Restriction fragment length polymorphism of nuclear rDNA in Sorex caecutiens/shinto group (Eulipotyphla, Soricidae).2005

    • Author(s)
      Naitoh, Y., M.A.Iwasa, S.D.Ohdachi, S.-H.Han, H.Suzuki.
    • Journal Title

      Mammamal Study 30

      Pages: 101-107

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Records of Sorex species (Soricidae) from Mt.Paektu, North Korea, with the first record of S.daphaenodon.2005

    • Author(s)
      Ohdachi, Satoshi D.
    • Journal Title

      Eurasian Journal of Forest Research 8(2)

      Pages: 71-73

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Restriction fragment length polymorphism of nuclear rDNA in Sorex caecutiens/shinto group (Eulipotyphla, Soricidae)2005

    • Author(s)
      Naitoh, Yukako
    • Journal Title

      Mammal Study 30

      Pages: 101-107

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Molecular phylogenetics of shrews (Mammalia : Soricidae) reveal timing of transcontinental colonizations.

    • Author(s)
      Dubey, S., N.Salamin, S.D.Ohdachi, P.Barriere, PVogel.
    • Journal Title

      Molecular Phylogenetics and Evolution (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Book] 動物地理の自然史. 分布と多様性の進化学2005

    • Author(s)
      増田隆一
    • Total Pages
      288
    • Publisher
      北海道大学図書刊行会
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Book] Natural history of biogeography. Evolution of distribution and biodiversity(in Japanese)2005

    • Author(s)
      Masuda R., H.Abe(edition)
    • Total Pages
      288
    • Publisher
      Hokkaido University Press
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary

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Published: 2005-04-01   Modified: 2016-04-21  

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