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Mechanisms for speciation and breeding system in plant species accompanied with phylogeographic structure.

Research Project

Project/Area Number 17570078
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Biodiversity/Systematics
Research InstitutionKyoto University

Principal Investigator

SETOGUCHI Hiroaki  Kyoro University, Graduate School of Human and Environmental Studies, Department of Environment and Interdisiprinary Sciences, Associate Professor, 大学院人間・環境学研究科, 助教授 (70206647)

Co-Investigator(Kenkyū-buntansha) OGINUMA Kazuo  Kochi Women's University, Department of Department of Environmental Science, Professor, 生活科学部, 教授 (30106794)
Project Period (FY) 2005 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥3,500,000 (Direct Cost: ¥3,500,000)
Fiscal Year 2006: ¥1,300,000 (Direct Cost: ¥1,300,000)
Fiscal Year 2005: ¥2,200,000 (Direct Cost: ¥2,200,000)
KeywordsPhylogeography / Ryukyu Islands / cpDNA haplotypes / Chromosome number / Population structure / Lysimachia mauritiana / Alpine plants / モミジハグマ属 / 植物地理
Research Abstract

Phylogeographic structures within a plant taxon would imply intraspecific differentiation in genetics, morphologies, reproduction, physiological and/or ecological traits, of which provide good arena for speciation and evolution. In this project, we elucidated phylogeographic structures in plant taxa on high mountains and continental island systems, the Ryukyu Islands, by determining cpDMA haplotypes or Karyomorphology. The distribution of cpDNA haplotypes in three alpine plants (Phyllodoce nipponica, Potentilla matsumurae and Diapensia nipponica) was geographically highly structured, and an abrupt genetic changes were detected between mountains in central Houshu and the Tohoku region. Haplotypes in central Honshu were thought to have diverged, suggesting that mountains in central Honshu served as refugia during the Quaternary climatic oscillations. Moreover, intraspecific variation of chromosome number and cytogeography were examined for samples of Lysimachia mauritiana from the Ryukyu Islands. This plants on the Ryukyu Islands harbor wide range of variation, ranging from 2n=16(6m), 2n=17(6m), 2n=17(7m), 2n=18(4m), 2n=18(5m), 2n=18(6n), 2n=19(5m), 2n=20(2m) to 2n=20(4m). Large islands with high altitude (e.g., Amamioshima Island and Tokunoshima Island) harbor the wider variation, suggesting these islands could act as refugia during the inter- and/or post- glacial transgression in the Quaternary climatic oscillations. On the other hand, islands with lower altitude harbor simple structure in cytotype, which would be attributable to bottleneck effects during the warm periods.

Report

(3 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • Research Products

    (24 results)

All 2007 2006 2005 Other

All Journal Article (23 results) Book (1 results)

  • [Journal Article] AFLP analysis of stenophylly for leaf productivity : comparison of the anatomy and physiology of a rheophyte, Farfugium japonicum var. luchuence, and a related non-rheophyte, F. japonicum (Asteraceae).2007

    • Author(s)
      Nomura, N., Setoguchi, H., Yasuda, K., Takaso, T.
    • Journal Title

      Canadian Journal of Botany (In press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Genetic structure of populations of the vulnerable aquatic macrophyte Ranunculus nipponicus (Ranunculaceae).2007

    • Author(s)
      Koga, K., Kadono, Y., Setoguchi, H.
    • Journal Title

      Journal of Plant Research 120

      Pages: 167-174

    • NAID

      10019936472

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Phylogeography and refugia of the Japanese endemic alpine plant Phyllodoce nipponica Makino (Ericaceae).2007

    • Author(s)
      Ikeda, H., Setoguchi, H.
    • Journal Title

      Journal of Biogeography 34

      Pages: 169-176

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Distribution changes of plants following global climatic Oscillations and subsequent genetic structure.2007

    • Author(s)
      Ikeda, H., Setoguchi, H.
    • Journal Title

      Evolution of Plants. 212

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] 高山ガシ類化石を含む中国雲南省西部の新生代植物化石群2006

    • Author(s)
      百原 新, 周 〓昆, 李 暁賢, 瀬戸口浩彰
    • Journal Title

      植生史研究 14

      Pages: 43-44

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Phylogeography of Arcterica nana (Maxim.) Makino (Ericaceae) suggests another range expansion history of Japanese alpine plants.2006

    • Author(s)
      Ikeda H., Setoguchi H.
    • Journal Title

      Journal of Plant research 119

      Pages: 489-495

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Distribution and present situation of Batrachium japonica in Kinki district.2006

    • Author(s)
      Koga, K., Kadono, Y., Setoguchi, H.
    • Journal Title

      Bunrui 6

      Pages: 121-130

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Comparison of leaf and floral morphology among insular endemics of Pieris (Ericaceae) on the Ryukyu Islands and Taiwan.2006

    • Author(s)
      Setoguchi, H., Fujita, T., Kurata, K., Maeda, Y., Peng, C.-I.
    • Journal Title

      Acta Phytotaxonomica et Geobotanica 57

      Pages: 173-182

    • NAID

      110006318348

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Phylogeography of Potentilla matsumurae and its intraspecific serpentine-endemic variants.2006

    • Author(s)
      Ikeda, H., Senni, K., Fujii, N., Setoguchi, H.
    • Journal Title

      Molecular Ecology 15

      Pages: 3731-3740

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Functional consequences of stenophylly for leaf productivity : comparison of the anatomy and physiology of a rheophyte, Farfugium japonicum var. luchuence, and a related non-rheophyte, F. japonicum (Asteraceae)2006

    • Author(s)
      Nomura, N., Setoguchi, H., Takaso, T.
    • Journal Title

      Journal of Plant Research 119

      Pages: 645-656

    • NAID

      10018809056

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Phylogeography of the genus Cardiandra based on genetic variation in cpDNA sequences.2006

    • Author(s)
      Setoguchi, H., Yukawa, T., Tokuoka, T., Momohara, A., Sogo, A., Takaso, T., Peng, C.I.
    • Journal Title

      Journal of Plant Research 119

      Pages: 401-406

    • NAID

      40007354345

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Chromosome evolution in the Laurales based on analyses of original and published data.2006

    • Author(s)
      Oginuma, K., Tobe, H.
    • Journal Title

      Journal of Plant Research 119

      Pages: 309-320

    • NAID

      10018186187

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Exceedingly high chromosome number in Strasburgeriaceae, a monotypic family endemic to New Caledonia.2006

    • Author(s)
      Oginuma, K., Munzinger, J., Tobe, H.
    • Journal Title

      Plant Systematics and Evolution 262

      Pages: 97-101

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Phylogeography of Potentilla matsumurae and its intraspecific serpentine-endemic variants.2006

    • Author(s)
      Ikeda, H.Senni, K., Fujii, N., Setoguchi, H.
    • Journal Title

      Molecular Ecology 15

      Pages: 3731-3740

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Functional consequences of stenophylly for leaf productivity : comparison of the anatomy and physiology of a rheophyte, Farfugium japonicum var. luchuence, and a related non-rheophyte, F.japonicum (Asteraceae).2006

    • Author(s)
      Nomura, N., Setoguchi, H., Takaso, T.
    • Journal Title

      Journal of Plant Research 119

      Pages: 645-656

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Phylogeography of Arcterica nana (Maxim.) Makino (Ericaceae) suggests another range expansion history of Japanese alpine plants2006

    • Author(s)
      Ikeda, H., Setoguchi, H.
    • Journal Title

      Journal of Plant Research 119

      Pages: 489-495

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Functional consequences of stenophylly for leaf productivity : comparison of the anatomy and physiology of a rheophyte, Farfugium japonicum var. luchuence, and a related non-rheophyte, F. japonicum (Asteraceae).2006

    • Author(s)
      Nomura, N., Setoguchi, H., Takaso, T.
    • Journal Title

      Journal of Plant Research 119

      Pages: 645-656

    • NAID

      10018809056

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Phylogeography of the genus Cardiandra based on genetic variation in cpDNA sequences.2006

    • Author(s)
      Setoguchi, H., Yukawa, T., Tokuoka, T., Momohara, A., Sogo, A., Takaso, T., Peng, C.I
    • Journal Title

      Journal of Plant Research 119

      Pages: 401-406

    • NAID

      40007354345

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Chromosome evolution in the Laurales based on analyses of original and published data2006

    • Author(s)
      Oginuma, K., Tobe, H.
    • Journal Title

      Journal of Plant Research 119

      Pages: 309-320

    • NAID

      10018186187

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Aneuploidy and karyotypic variations of Lysimachia mauritiana (Primulaceae) on the Yonaguni Island of the Ryukyu Archipelago in Japan.2005

    • Author(s)
      Oginuma, K.et al., Setoguchi, H., 他3名
    • Journal Title

      Chromosome Science 8・2-3

      Pages: 24-34

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Karyomorphology of Lysimachia mauritiana (Primulaceae) on the Orchid Island of Taiwan.2005

    • Author(s)
      Oginuma, K.et al., Setoguchi, H., 他4名
    • Journal Title

      Chromosome Science 8・2-3

      Pages: 61-65

    • NAID

      110004821643

    • Related Report
      2005 Annual Research Report
  • [Journal Article] AFLP analysis of stenophylly for leaf productivity : comparison of the anatomy and physiology of a rheophyte, Farfugium japonicum var. luchuence, and a related non-rheophyte, F. japonicum. (Asteraceae).

    • Author(s)
      Nomura, N., Setoguchi, H., Yasuda, K., Takaso, T.
    • Journal Title

      Canadian Journal of Botany (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Cenozoic flora with Quercus sect. heterobaranus in the western Yunnan Province, southwestern China.

    • Author(s)
      Momohara, A., Zhou, Z.-K., Li, S.-T., Setoguchi, H..
    • Journal Title

      Japanese Journal of Historical Botany 14

      Pages: 43-44

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Book] 細胞工学別冊 植物の進化2007

    • Author(s)
      池田啓, 瀬戸口浩彰(分担執筆)
    • Total Pages
      212
    • Publisher
      秀潤社,東京
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary

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Published: 2005-04-01   Modified: 2016-04-21  

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