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Phylogeographic analysis on the disjunct distribution of rare vascular plants of the Ryukyus

Research Project

Project/Area Number 17570083
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Biodiversity/Systematics
Research InstitutionUniversity of the Ryukyus

Principal Investigator

YOKOTA Masatsugu  University of the Ryukyus, Faculty of Science, Professor (90166885)

Co-Investigator(Kenkyū-buntansha) DENDA Tetsuo  University of the Ryukyus, Faculty of Science, Associate Professor (50284948)
松村 俊一  琉球大学, 理工学研究科, 研究員 (70398311)
Project Period (FY) 2005 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥3,250,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥150,000)
Fiscal Year 2007: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2006: ¥600,000 (Direct Cost: ¥600,000)
Fiscal Year 2005: ¥2,000,000 (Direct Cost: ¥2,000,000)
Keywordsthe Ryukyu Archipelago / disjunct distribution / Cycas revoluta / Ophiopogon reversus / Ophiorrhiza japonica var. amamiana / Oxygyne shinzatoi / Lonicera japonica var. miyagusukiana / Ligustrum tamakii / 核型 / サツマイナモリ / サツマイナモリ属 / シソクサ属 / ヤブラン属 / ノシラン属 / スイカズラ属 / ヨナクニトキホコリ / ハマボッス
Research Abstract

We confirmed the variation of seed morphology in Cycas revoluta (Cycadaceae) of the Ryukyus, however, variation in seed morphology had no geographical tendency and we could not recognize any interspecific taxa in C. revoluta based on seed morphology.
Karyotypes of Ophiopogon reversus (Convallariaceae) collected from four localities in Taiwan and one locality on Yonaguni-jima Island in the southern Ryukyus were reported for the first time. The karyotype of O. reversus was different from O. jaburan in having one pair of short submedian chromosomes with secondary constrictions at the proximal region of the long arms.
We examined the floral morph of tetraploid Ophiorrhiza japonica var. amamiana and diploid O. japonica var. japonica (Rubiaceae) to elucidate the association of distyly and ploidy levels. Chloroplast DNA phylogeny was reconstructed to determine the number of tetraploidization events and floral morph shifts in O. japonica. In cpDNA sequencing analysis, no haplotype was shared bet … More ween the two varieties. The cpDNA hap lotype network displayed the monophyly of O. japonica var. amamiana, suggesting a single origin of this variety. Because O. japonica var. amamiana having the morphological and cytological entity is recognized as a single lineage and clearly separated from O. japonica var. japonica, this variety can be considered to be a distinct species.
Hayataella (Rubiaceae) is a monotypic genus endemic to Taiwan that comprises H. michelloides. To elucidate the systematic treatment of Hayataella, molecular phylogenetic analyses based on nrDNA and cpDNA were conducted with four Ophiorrhiza species. In the Bayesian and the most parsimonious trees, H. michelloides was included in the Ophiorrhiza clade. The monotypic status of Hayataella is, therefore, not considered appropriate, and the combination Ophiorrhiza michelloides is supported.
The chromosome characteristics and molecular phylogenetic position of Oxygyne shinzatoi (Burmanniaceae) endemic to Okinawa Island were studied. The basic chromosome number of the genus was thought to be x=9. Based on the 18S rDNA sequence, O. shinzatoi was consistently found to belong to the monophyletic group of tribe Thismieae. Distance analysis from the most recent common ancestor indicated that O. shinzatoi had the lowest substitution rate among the species of tribe Thismieae. Combined with the basic chromosome numbers and the substitution rate characteristics, O. shinzatoi can be considered to be one of the basal taxon of tribe Thismieae. Less

Report

(4 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • 2005 Annual Research Report
  • Research Products

    (44 results)

All 2008 2007 2006 2005

All Journal Article (31 results) (of which Peer Reviewed: 6 results) Presentation (6 results) Book (7 results)

  • [Journal Article] Phylogenetic position of Oxygyne shinzatoi (Buimaimiaceae) inferred from 18S rDNA sequences2008

    • Author(s)
      Yokoyama, J., Y. Koizumi, M. Yokota, H. Tsukaya
    • Journal Title

      Journal of Plant Research 121

      Pages: 27-32

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Phylogenetic position of Oxygyne shinzatoi (Burmanniaceae) inferred from 18S rDNA sequences.2008

    • Author(s)
      Yokoyama, J., Y. Koizumi, M. Yokota, H. Tsukaya
    • Journal Title

      J. PI. Res. 121

      Pages: 27-32

    • NAID

      10021087152

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Phylogenetic position of Oxygyne shinzatoi (Burmanniaceae) inferred from 18S rDNA sequences2008

    • Author(s)
      Yokoyama, J., Y. Koizumi, M. Yokota & H. Tsukaya
    • Journal Title

      Journal of Plant Research 121

      Pages: 27-32

    • NAID

      10021087152

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Breakdown of distyly in a tetraploid variety of Ophiorrhiza japonica (Rubiaceae) and its phylogengetic analysis2007

    • Author(s)
      Nakamura, K., T. Denda, O. Kameshima, M. Yokota
    • Journal Title

      Journal of Plant Research 120

      Pages: 501-509

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Chromosomal characteristics of Oxygyne shinzatoi (Hatus. ) C. Abe et Akasawa (Burtnaimiaceae), and its phylogenetic significance2007

    • Author(s)
      Tsukaya, H., M. Yokota, H. Okada
    • Journal Title

      Acta Phytotaxonomica et Geobotanica 58

      Pages: 100-106

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Breakdown of distyly in a tetraploid variety of Ophiorrhiza japonica (Rubiaceae) and its phylogengetic analysis.2007

    • Author(s)
      Nakamura, K., T. Denda, O. Kameshima, M. Yokota
    • Journal Title

      J. PI. Res. 120

      Pages: 501-509

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Chromosomal characteristics of Oxygyne shinzatoi (Hatus. ) C. Abe et Akasawa (Burmanniaceae), and its phylogenetic significance.2007

    • Author(s)
      Tsukaya, H., M. Yokota, H. Okada
    • Journal Title

      Acta Phytotax. Geobot 58

      Pages: 100-106

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Cytotaxonomical studies of the genus Ligustrum (Oleaceae) in the Ryukyus of Japan.2007

    • Author(s)
      Denda, T., K. Watanabe, M. Yokota
    • Journal Title

      Chromosome Science 7

      Pages: 37-41

    • NAID

      110006664186

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Breakdown of distyly in a tetraploid variety of Ophiorrhiza japonica (Rubiaceae) and its phylogenetic analysis2007

    • Author(s)
      Nakamura, K., T. Denda, O. Kameshima & M. Yokota
    • Journal Title

      Journal of Plant Research 120

      Pages: 501-509

    • NAID

      10019560163

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Chromosomal characteristics of Oxygyne shinzatoi (Hatus.) C. Abe et Akasawa (Burmanniaceae), and its phylogenetic significance2007

    • Author(s)
      Tsukaya, H., M. Yokota & H. Okada
    • Journal Title

      Acta Phytotaxonomica et Geobotanica 58

      Pages: 100-106

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Breakdown of distyly in a tetraploid variety of Ophiorrhiza japonica (Rubiaceae) and its phylogengetic analysis2007

    • Author(s)
      Nakamura, K., T.Denda, O.Kameshima, M.Yokota
    • Journal Title

      Journal of Plant Reserach 120(印刷中)

    • Related Report
      2006 Annual Research Report
  • [Journal Article] 日本植物園協会, 国立科学博物館筑波実験植物園, 植物園自然保護国際機構2007

    • Author(s)
      横田昌嗣, 兼本正, 國府方吾郎
    • Journal Title

      琉球列島の絶滅危惧植物I、沖縄県産絶滅危惧植物の現状.日本の植物園における生物多様性保全 (印刷中)

    • Related Report
      2006 Annual Research Report
  • [Journal Article] 日本植物園協会, 国立科学博物館筑波実験植物園, 植物園自然保護国際機構2007

    • Author(s)
      國府方吾郎, 兼本正, 横田昌嗣
    • Journal Title

      琉球列島の絶滅危惧植物III、何をすべきか-植物園を中心に-.日本の植物園における生物多様性保全 (印刷中)

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Homostyly and autogamy in Ophiorrhiza pumila (Rubiaceae) from the Ryukyu Archipelago.2006

    • Author(s)
      Nakamura, K., T. Denda, M. Yokota
    • Journal Title

      J. Jpn. Bot. 81

      Pages: 113-120

    • NAID

      40007281331

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Karyotype of Ophiopogon reversus (Convallariaceae) from Taiwan and the southern Ryukyus.2006

    • Author(s)
      Denda, T., K. Nakamura, M. Yokota
    • Journal Title

      Taiwania 51

      Pages: 117-122

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Phylogenetic systematics of the monotypic genus Hayataella (Rubiaceae) endemic to Taiwan.2006

    • Author(s)
      Nakamura, K., S.-W. Chung, G. Kokubugata, T. Denda, M. Yokota
    • Journal Title

      J. PI. Res. 119

      Pages: 657-661

    • NAID

      10018809104

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Homostyly and autogamy in Ophiorrhiza pumila (Rubiaceac) fron the Ryukyu Archipelago2006

    • Author(s)
      Nakamura, K., T.Denda, M.Yokota
    • Journal Title

      Journal of Japanese Botany 81

      Pages: 113-120

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Karyotype of Ophiopogon reversus (Convallariaceae) from Taiwan and the southern Ryukryus2006

    • Author(s)
      Denda, T., K.Nakamura, M.Yokota
    • Journal Title

      Taiwania 51(2)

      Pages: 117-122

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Stand structure and woody species diversity in relation to stand stratification in a subtropical evergreen broadbleaf forest, Okinawa Island2006

    • Author(s)
      Feroz, S.M., A.Hagihara, M.Yokota
    • Journal Title

      Journal of Plant Research 119

      Pages: 293-301

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Rhylogenetic systematics of the monotypic genus Hayataella (Rubiaceae) endemic to Taiwan2006

    • Author(s)
      Nakamura, K., S.-W.Chung, G.Kokubugata, T.Denda, M.Yokota
    • Journal Title

      Journal of Plant Research 119

      Pages: 657-661

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Taxonomic reconsideration of Lysimachia ardisioides (Primulaceae) from Taiwan2006

    • Author(s)
      Kokubugata, G., g.-I Peng, Y.Saito, M.Yokota, S.Kobayashi
    • Journal Title

      Memoirs of National Science Museum, Tokyo 44

      Pages: 135-140

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Comparative characterization of two closely related achlorophyllous orchids, Gastrodia nipponica and G. takarensis2006

    • Author(s)
      Umata, H., M.Yokota
    • Journal Title

      Research Bulletin of the Kagoshima University Forests 34

      Pages: 57-67

    • Related Report
      2006 Annual Research Report
  • [Journal Article] 琉球列島におけるニガナ属の網状進化2006

    • Author(s)
      傅田哲郎
    • Journal Title

      分類 6(2)

      Pages: 107-114

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Homostyly and autogamy in Ophiorrhiza pumila (Rubiaceae) from the Ryukyu Archipelago2006

    • Author(s)
      Nakamura, K., T.Denda, M.Yokota
    • Journal Title

      J.Jpn.Bot. 81(印刷中)

    • NAID

      40007281331

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Stand structure and woody species diversity in relation to the stand stratification in a subtropical evergreen broadleaf forest, Okinawa Island2006

    • Author(s)
      Feroz, S.M., A.Hagihara, M.Yokota
    • Journal Title

      J.Pl.Res. 119(印刷中)

    • NAID

      10018186124

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Karyotype of Ophiopogon reversus (Convallariaceae, Ophiopogoneae) from Taiwan and the southern Ryukyus of Japan2006

    • Author(s)
      Denda, T., K.Nakamura, M.Yokota
    • Journal Title

      Taiwania 51(印刷中)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Aneuploidy and karyotypic variation of Lysimachia mauriTiana (Primulaceae) in the Yonagunijima Island, the Ryukyu Archipelago, Japan2005

    • Author(s)
      Oginuma, K., A.Hamada, H.Sato, Y.Kono, M.Yokota, H.Setoguchi
    • Journal Title

      Chromosome Science 8(2)

      Pages: 45-54

    • NAID

      110004821641

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Karyomorphology of Lysimachia mauritiana (Primulaceae) in the Orchid Island, Taiwan2005

    • Author(s)
      Oginuma, K., H.Sato, Y.Kono, M.Yokota, H.Setoguchi, G.Kokubugata
    • Journal Title

      Chromosome Science 8(2)

      Pages: 63-66

    • NAID

      110004821643

    • Related Report
      2005 Annual Research Report
  • [Journal Article] 琉球列島のモダマ類2005

    • Author(s)
      脇田悟寿, 與座(仲本)優子, 来間和菜, 傳田哲郎, 立石庸一
    • Journal Title

      分類 5(1)

      Pages: 9-19

    • NAID

      110006342802

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Leaf morphology of a subtropical rheophyte Solenogyne mikadoi and its temperate relative S.bellioides is differentially affected by plant hormones and their biosynthetic inhibitors2005

    • Author(s)
      Itoh, R., N.Nakahara, T.Asami, T.Denda
    • Journal Title

      J.Pl.Res. 118

      Pages: 181-186

    • Related Report
      2005 Annual Research Report
  • [Journal Article] 琉球列島産ソテツCycas revoluta Thunberg(ソテツ科 Cycadaceae)の種子形態2005

    • Author(s)
      中村剛, 傳田哲郎, 横田昌嗣
    • Journal Title

      沖縄生物学会誌 (43)

      Pages: 53-57

    • NAID

      10016739465

    • Related Report
      2005 Annual Research Report
  • [Presentation] ヤブランとコヤブラン(スズラン科ヤブラン属)の染色体数とcpDNAハプロタイプの地理的分布2008

    • Author(s)
      渡邊敬太, 傅田哲郎, 横田昌嗣
    • Organizer
      日本植物分類学会第7回大会
    • Place of Presentation
      首都大学東京, 東京都八王子市
    • Year and Date
      2008-03-21
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] ヤブランとコヤブラン(スズラン科ヤブラン属)の染色体数とcpDNAハプロタイプの地理的分布2008

    • Author(s)
      渡邊敬太・傳田哲郎・横田昌嗣
    • Organizer
      日本植物分類学会, 第7回大会
    • Place of Presentation
      東京都八王子市
    • Year and Date
      2008-03-21
    • Related Report
      2007 Annual Research Report
  • [Presentation] Floristic plant geography in the Ryukyu Archipelago based on exhaustive distribution records of seed plants at the species, genus, and family levels.2007

    • Author(s)
      Nakamura, K., R. Suwa, T. Denda, M. Yokota
    • Organizer
      21st Pacific Science Congress
    • Place of Presentation
      Okinawa
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Plant distribution patterns in the Ryukyu Archipelago, Japan in the light of seed dispersal abilities.2007

    • Author(s)
      Nakamura, K., T. Denda, M. Yokota
    • Organizer
      International workshop on tropical island biodiversity: Across land and sea
    • Place of Presentation
      National University of Singapore
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Biogeography of Ophiorrhiza japonica (Rubiaceae) in East Asian Islands, from molecular phylogenetic and ecophysiological view points.2006

    • Author(s)
      Nakamura, K., R. Suwa, T. Denda, M. Yokota
    • Organizer
      Second Scientific Congress of East Asia Federation of Ecological Societies
    • Place of Presentation
      Niigata
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Gesneriaceae species in the Ryukyus, Japan.2005

    • Author(s)
      Kokubugata, G., M. Yokota, S. Kobayashi, C.-I Peng.
    • Organizer
      XVII International Botanical Congress
    • Place of Presentation
      Vienna, Austria
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Book] 沖縄島の渓流植物. 諸喜田茂充・立原一憲(編), やんばるの清流-リュウキュウアュが棲める川づくり-, pp. 109-112.2007

    • Author(s)
      横田昌嗣
    • Total Pages
      300
    • Publisher
      リュウキュウアュを蘇生させる会, 沖縄県浦添市.
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Book] 沖縄島の渓流植物・諸喜田茂充・立原一憲(編), やんばるの清流2007

    • Author(s)
      横田昌嗣
    • Publisher
      リュウキュウアユを蘇生させる会
    • Related Report
      2007 Annual Research Report
  • [Book] 種子植物・シダ植物. 沖縄県文化環境部自然保護課(編)、改訂・沖縄県の絶滅のおそれのある野生生物(菌類編・植物編)、-レッドデータおきなわ-2006

    • Author(s)
      横田昌嗣・他26名
    • Publisher
      沖縄県文化環境部自然保護課
    • Related Report
      2006 Annual Research Report
  • [Book] 核型表記法 : 間期. クロモソーム-植物染色体研究の方法-(福井希一, 向井康比己, 谷口研至(編))2006

    • Author(s)
      横田昌嗣
    • Publisher
      養賢堂
    • Related Report
      2006 Annual Research Report
  • [Book] 琉球列島を舞台とした維管束植物の進化-琉球列島におけるニガナ属(キク科)の異種間交雑と倍数性を中心に-.琉球大学21世紀COEプログラム編集委員会(編)、美ら島の自然史-サンゴ礁島嶼系の生物多様性2006

    • Author(s)
      傅田哲郎, 横田昌嗣
    • Publisher
      東海大学出版会
    • Related Report
      2006 Annual Research Report
  • [Book] 改訂・沖縄県の絶滅のおそれのある野生生物(菌類編・植物編),-レッドデータおきなわ-「維管束植物」(沖縄県文化環境部自然保護課(編))2006

    • Author(s)
      横田昌嗣, 他26名
    • Publisher
      沖縄県文化環境部自然保護課
    • Related Report
      2005 Annual Research Report
  • [Book] クロモソーム-植物染色体研究の方法-「核型表記法:間期」(福井希一・向井康比己・谷口研至(編))2006

    • Author(s)
      横田昌嗣
    • Publisher
      養賢堂
    • Related Report
      2005 Annual Research Report

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Published: 2005-04-01   Modified: 2016-04-21  

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