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Molecular analysis of mite mitochondrial genome structure

Research Project

Project/Area Number 17570086
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Biodiversity/Systematics
Research InstitutionFukuyama University

Principal Investigator

FUKUNAGA Masahito  Fukuyama University, Faculty of Pharmacy and Pharmaceutical Sciences, Professor, 薬学部, 教授 (20132483)

Co-Investigator(Kenkyū-buntansha) TABUCHI Norihiko  Fukuyama University, Faculty of Pharmacy and Pharmaceutical Sciences, Research Associate, 薬学部, 講師 (60330685)
MITANI Harumi  Fukuyama University, Faculty of Pharmacy and Pharmaceutical Sciences, Research Associate, 薬学部, 助手 (30330690)
Project Period (FY) 2005 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥3,500,000 (Direct Cost: ¥3,500,000)
Fiscal Year 2006: ¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 2005: ¥2,100,000 (Direct Cost: ¥2,100,000)
Keywordsmite / Leptotrombidium / Acariformes / gene re-arrangement / phylogenetic analysis / mitochondrial genome / chigger mite / 生態
Research Abstract

The gene content of a mitochondrial (mt) genome is usually conserved in Metazoa. In contrast, the re-arrangement of these genes, 37 genes and large noncoding region (LNR), was observed in chigger mites of the genus Leptotombidium. Recombination of theses genes, relocation in even different direction, and gene duplication were also occurred substantially in the other acariformes mite (Ascoschoengastia sp. and Walchia hayashii). We found that the mt genome of Leptotrombidium pallidum has an extra gene for large-subunit rRNA (rrnL), a pseudo-gene for small-subunit rRNA (PrrnS), and three extra LNRs, additional to the 37 genes and an LNR typical of Metazoa. Further, the arrangement of mt genes of L. pallidum differs drastically from that of the hypothetical ancestor of the arthropods. To find to what extent the novel gene content and gene arrangement occurred in Leptotrombidium, we sequenced the entire mt genomes of four other species, L.akamushi, L.deliense, Ascoschoengastia sp., and Walchia hayashii, and partially L.fletcheri, L.scutellare, L.intermedium, L.chaingraiensis, L.imphalum, L.fujii, and Leptotrombidium sp. The mit genomes of Ascoschoengastia sp. and W.hayashii were entirely distinct structures from that of Leptotrombidium. The other Leptotrombidium species share the or partial arrangement of all genes with L. pallidum, except trnQ (for tRNA-glutamine). Unlike L.pallidum, however, these other species do not have extra rrnL or PrrnS and have only one extra LNR. By comparison between Leptotrombidium species and the ancestor of the arthropods, we propose that (1) the type of mt genome present in L.pallidum evolved from the type present in the other three Leptotrombidium species, and (2) three molecular mechanisms were involved in the evolution of mt gene content and gene arrangement in Leptotrombidium species.

Report

(3 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • Research Products

    (9 results)

All 2006 2005

All Journal Article (9 results)

  • [Journal Article] Molecular mechanisms for the variation of mitochondrial gene content and gene arrangement among chigger mites of the genus Leptotrombidium (Acari : Acariformes).2006

    • Author(s)
      Ishao, R., Barke, S.C., Mitani, H., Takahashi, M., Fukunaga, M.
    • Journal Title

      Journal of Molecular Evolution 63(2)

      Pages: 251-261

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Molecular mechanisms for the variation of mitochondrial gene content and gene arrangement among chigger mites of the genus Leptotrombidium (Acari : Acariformes).2006

    • Author(s)
      Shao, R., Barke, S.C., Mitani, H., Takahashi, M., Fukunaga, M.
    • Journal Title

      Journal of Molecular Evolution 63(2)

      Pages: 251-261

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Molecular mechanisms for the variation of mitochondrial gene content and gene arrangement among chigger mites of the genus Leptotrombidium (Acari : Acariformes).2006

    • Author(s)
      Shao, R, Barke, S.C, Mitani, H, Takahashi, M, Fukunaga, M.
    • Journal Title

      Journal of Molecular Evolution 63(2)

      Pages: 251-261

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Evolution of duplicate control regions in the mitochondrial genomes of metazoa : a case study with Australasian Ixodes ticks.2005

    • Author(s)
      R.Shao, S.C.Barker, H.Mitani, Y.Aoki, M.Fukunaga
    • Journal Title

      Molecular Biology and Evolution 22(2)

      Pages: 620-629

    • NAID

      110007408816

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Novel mitochondrial gene content and gene arrangement indicate illegitimate inter-mtDNA recombination in the chigger mite, Leptotrombidium pallidum.2005

    • Author(s)
      R.Shao, H.Mitani, S.C Barker, M.Takahashi, M.
    • Journal Title

      Journal of Molecular Evolution 60(5)

      Pages: 764-773

    • NAID

      110007408815

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Evolution of duplicate control regions in the mitochondrial genomes of metazoa : a case study with Australasian Ixodes ticks.2005

    • Author(s)
      R.Shao, S.C.Barker, H.Mitani, Y.Aoki, M.Fukunaga.
    • Journal Title

      Journal of Molecular Evolution 60(5)

      Pages: 764-773

    • NAID

      110007408816

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Novel mitochondrial gene content and gene arrangement indicate illegitimate inter-mtDNA recombination in the chigger mite, Leptotrombidium pallidum.2005

    • Author(s)
      R.Shao, H.Mitani, S.C.Barker, M.Takahashi, M.Fukunaga.
    • Journal Title

      Molecular Biology and Evolution 22(2)

      Pages: 620-629

    • NAID

      110007408815

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Evolution of duplicate control regions in the mitochondrial genomes of metazoa: a case study with Australasian Ixodes ticks.2005

    • Author(s)
      R.Shao, S.C.Barker, H.Mitani, Y.Aoki, M.Fukunaga.
    • Journal Title

      Molecular Biology and Evolution 22

      Pages: 620-629

    • NAID

      110007408816

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Novel mitochondrial gene content and gene arrangement indicate illegitimate inter-mtDNA recombination in the chigger mite, Leptotrombidium pallidum.2005

    • Author(s)
      R.Shao, H.Mitani, S.C Barker, M.Takahashi, M.Fukunaga.
    • Journal Title

      Journal of Molecular Evolution 60

      Pages: 764-773

    • NAID

      110007408815

    • Related Report
      2005 Annual Research Report

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Published: 2005-04-01   Modified: 2016-04-21  

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