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Origin and Development of the Chordate Traits

Research Project

Project/Area Number 17570183
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Developmental biology
Research InstitutionNational Institute for Basic Biology

Principal Investigator

TAKAHASHI Hiroki  National Institute for Basic Biology, Division for Morphogenesis, Assistant Professor (40283585)

Project Period (FY) 2005 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥3,800,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥300,000)
Fiscal Year 2007: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2006: ¥1,000,000 (Direct Cost: ¥1,000,000)
Fiscal Year 2005: ¥1,500,000 (Direct Cost: ¥1,500,000)
Keywordsascidian / development / evolution / notochord / neuron / 遺伝子 / ゲノム / 細胞・組織
Research Abstract

Formation of the chordate body is accomplished by a complex set of morphogenetic movements including convergent extension of notochord cells. In the urochordate ascidian Ciona intestinalis, Brachyury (Ci-Bra) plays a key role in the formation of the notochord, and more than thirty Ci-Bra-downstream notochord genes have been identified. In the present study, we examined the effects of functional suppression of nine Ci-Bra-downstream notochord genes, which include Ci-PTP (protein tyrosine phosphatase), Ci-ACL (ATP: citratelyase), Ci-prickle, Ci-netrin, Ci-trop (tropomyosin-like), Ci-Noto3, Ci-ASAK (ATP sulfurylase/APS kinase), Ci-ERM (ezrin/redixin/meiosin) and Ci-pellino. When function of first two genes (Ci-PTP and Ci-ACL) was suppressed with specific morpholinos, the notochord cells failed convergent, while functional suppression of Ci-prickle resulted in a failure of intercalation, and therefore the cells in these three types of embryo remained in mid-dorsal region of the embryo. Functional suppression of the next four genes (Ci-netrin, Ci-trop, Ci-Noto3 and Ci-ASAK) resulted in the partial defect of intercalation, and the notochord did not consist of a single row of coin-shaped cells. In addition, when the function of the last two genes (Ci-ERM and Ci-pellino) was suppressed, the embryo showed failure of notochord cell elongation, even though convergent/extension took place normally. These results indicate that many Ci-Bra-downstream notochord genes are involved in convergent/extension of the embryo. The results also suggest that an evolutionary event leading to the formation of a chordate-specific character or notochord was the recruitment of genes required for convergent/extension of embryonic cells.

Report

(4 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • 2005 Annual Research Report
  • Research Products

    (40 results)

All 2008 2007 2006 2005

All Journal Article (16 results) (of which Peer Reviewed: 8 results) Presentation (24 results)

  • [Journal Article] Brachyury-downstream gene sets in a chordate,Ciona intestinalis:Integrating notochord specification,morphogenesis and chordate evolution2008

    • Author(s)
      Hotta, K., Takahashi, H., Satoh, N.&Gojobori, T.
    • Journal Title

      Evo.Dev. 10

      Pages: 37-51

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Brachyury-downstream gene sets in a chordate, Ciona intestinalis : Integrating notochord specification, morphogenesis and chordate evolution.2008

    • Author(s)
      Hotta, K., Takahashi, H., Satoh, N., Gojobori, T.
    • Journal Title

      Evo. Dev. 10

      Pages: 37-51

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Brachyury-downstream gene sets in a chordate,Ciona intestinalis:Integrating notochord specification,morphogenesis and chordate evolution2008

    • Author(s)
      Hotta, K., Takahashi, H., Satoh, N.. & Gojobori, T.
    • Journal Title

      Evo.Dev. 10

      Pages: 37-51

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Brachyury-downstream notochord genes and convergent extension in Ciona intestinalis embryos2007

    • Author(s)
      Hotta, K., Yamada, S., Ueno, N., Satoh, N.&Takahashi, H.
    • Journal Title

      Dev.Growth Differ. 49

      Pages: 373-382

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] A web-based interactive developmental table for ascidian Cion a intestinalis,including 3D real-image embryo reconstructions:I.from fertilized egg to hatching larva2007

    • Author(s)
      Hotta, K., Mituhara, K., Takahashi, H., Inaba, K., Oka, K., Gojobori, T. & Ikeo, K.
    • Journal Title

      Dev.Dynamics. 236

      Pages: 1790-1805

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] H. Brachyury-downstream notochord genes and convergent extension in Ciona intestinalis embryos.2007

    • Author(s)
      Hotta, K., Yamada, S., Ueno, N., Satoh, N., Takahashi
    • Journal Title

      Dev. Growth Differ. 49

      Pages: 373-373

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] A web-based interactive developmental table for ascidian Ciona intestinalis, including 3D real-image embryo reconstructions : I. from fertilized egg to hatching larva.2007

    • Author(s)
      Hotta, K., Mituhara, K., Takahashi, H., Inaba, K., Oka, K., Gojobori, T., Ikeo, K.
    • Journal Title

      Dev. Dynamics. 236

      Pages: 1790-1805

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Brachyury-downstream notochord genes and convergent extension in Ciona intestinalis embryos2007

    • Author(s)
      Hotta, K., Yamada, S., Ueno, N., Satoh, N. &Takahashi, H.
    • Journal Title

      Dev.Growth Differ 49

      Pages: 373-382

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A web-based interactive developmental table for ascidian Cion a intestinalis,including 3D real-image embryo reconstructions:I.from fertilized egg to hatching larva2007

    • Author(s)
      Hotta, K., Mituhara, K., Takahashi, H., Inaba, K., Oka, K., Gojobori, T. &Ikeo, K.
    • Journal Title

      Dev.Dynamics 236

      Pages: 1790-1805

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Brachyury-downstream notochord genes and convergent extension in Ciona intestinalis embryos.2007

    • Author(s)
      Hotta, K., Yamada, S., Ueno, N., Satoh, N., Takahashi,H.
    • Journal Title

      Dev.Growth Differ. 49(in press)

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Both the functional specificity and autoregulative activity of two ascidian T-box genes Hr-Bra and Hr-Tbx6 are likely to be mediated by the DNA-binding domain2005

    • Author(s)
      Takahashi, H., Mitani, Y.&Satoh, N.
    • Journal Title

      Dev.Growth Diff. 47

      Pages: 173-185

    • NAID

      10015716165

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Regulation of NF-kB/Rel by IkB is essential for ascidian notochord form ation2005

    • Author(s)
      Kawai, N., Takahashi, H., Nishida, H.&Yokosawa, H.
    • Journal Title

      Dev.Biol. 41

      Pages: 657-664

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Both the functional specificity and autoregulative activity of two ascidian T-box genes Hr-Bra and Hr-Tbx6 are likely to be mediated by the DNA-binding domain.2005

    • Author(s)
      Takahashi, H., Mitani, Y., Satoh, N.
    • Journal Title

      Dev. Growth Dz.ff. 47

      Pages: 173-185

    • NAID

      10015716165

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Regulation of NF-kB/Rel by 1kB is essential for ascidian notochord formation.2005

    • Author(s)
      Kawai, N., Takahashi, H., Nishida, H., Yokosawa, H.
    • Journal Title

      Dev. Biol. 41

      Pages: 657-664

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Both the functional specificity and autoregulative activity of two ascidian T-box genes Hr-Bra and Hr-Tbx6 are likely to be mediated by the DNA-binding domain.2005

    • Author(s)
      Takahashi, H., Mitani, Y., Satoh, N.
    • Journal Title

      Dev. Growth Diff. 47

      Pages: 173-185

    • NAID

      10015716165

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Regulation of NF-kB/Rel by IkB is essential for ascidian notochord formation.2005

    • Author(s)
      Kawai, N., Takahashi, H., Nishida, H., Yokosawa, H.
    • Journal Title

      Dev.Biol. 41

      Pages: 657-664

    • Related Report
      2005 Annual Research Report
  • [Presentation] カタユウレイボヤ初期発生の新ステージングと四次元胚発生画像データベースFABA2007

    • Author(s)
      堀田 耕司, 高橋 弘樹, 稲葉 一男, 岡 浩太郎, 池尾 一穂
    • Organizer
      第78回日本動物学会大会
    • Place of Presentation
      弘前大学
    • Year and Date
      2007-09-20
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] A web-based interactive developmental table for ascidian Ciona intestinalis, including 3D real-image embryo reconstructions.2007

    • Author(s)
      Hotta, K., Takahashi, H., Inaba, K., Oka, K., Ikeo, K.
    • Organizer
      78th Annual meeting for the Japanese Society of Zoolgists.
    • Place of Presentation
      Hirosaki University
    • Year and Date
      2007-09-20
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Developmental table for the aascidian Ciona intestinalis using 3D real image embryo:I.From fertilized egg to hactching larva2007

    • Author(s)
      Hotta, K., Mitsuhara, K., Takahashi, H., Inaba, K., Oka, K., Gojobori, T.&Ikeo, K.
    • Organizer
      4th International Tunicate Meeting
    • Place of Presentation
      Villefranche,FRANCE
    • Year and Date
      2007-06-26
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Developmental table for the aascidian Ciona intestinalis using 3D real image embryo : I. From fertilized egg to hactching larva.2007

    • Author(s)
      Hotta, K., Mitsuhara, K., Takahashi, H., Inaba, K., Oka, K., Gojobori, T., Ikeo, K.
    • Organizer
      4th International Tunicate Meeting.
    • Place of Presentation
      FRANCE
    • Year and Date
      2007-06-26
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Brachyury-downstream notochord genes and convergent extension in Ciona intestinalis embryos2007

    • Author(s)
      Hotta, K., Yamada, S., Ueno, N., Satoh, N.&Takahashi, H.
    • Organizer
      4th International Tunicate Meeting
    • Place of Presentation
      Villefranche,FRANCE
    • Year and Date
      2007-06-25
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Annual Research Report 2007 Final Research Report Summary
  • [Presentation] Brachyury-downstream notochord genes and convergent extension in Ciona intestinalis embryos.2007

    • Author(s)
      Hotta, K., Yamada, S., Ueno, N., Satoh, N., Takahashi, H.
    • Organizer
      4th International Tunicate Meeting
    • Place of Presentation
      FRANCE
    • Year and Date
      2007-06-25
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Brachyury-downstream notochord genes and convergent extension in Ciona intestinalis embryos2007

    • Author(s)
      Hotta, K., Yamada, S., Ueno, N., Satoh, N.&Takahashi, H.
    • Organizer
      第40回日本発生生物学会大会
    • Place of Presentation
      福岡国際会議場
    • Year and Date
      2007-05-30
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Brachyury-downstream notochord genes and convergent extension in Ciona intestinalis embryos.2007

    • Author(s)
      Hotta, K., Yamada, S., Ueno, N., Satoh, N., Takahashi, H.
    • Organizer
      40th Annual meeting for the Japanese society of Developmental Biologists.
    • Place of Presentation
      Fukuoka International Congress Center
    • Year and Date
      2007-05-30
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] 脊索の形態形成における特異的,新規発生遺伝子の機能解析2006

    • Author(s)
      山田 成宏, 堀田 耕司, 上野 直人, 佐藤 矩行, 高橋 弘樹
    • Organizer
      生物の発生・分化・再生 第5回公開シンポジウム
    • Place of Presentation
      コクヨホール
    • Year and Date
      2006-12-15
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Functional analysis of Notochord-specific novel genes in the Ciona intestinalis embryos.2006

    • Author(s)
      Yamada, S., Hotta, K., Ueno, N., Satoh, N., Takahashi, H.
    • Organizer
      5th symposium of Development, Differentiation and Regeneration.
    • Place of Presentation
      Kokuyo Hall
    • Year and Date
      2006-12-15
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] カタユウレイボヤ脊索遺伝子(Ci-Noto4)の解析2006

    • Author(s)
      山田 成宏, 上野 直人, 佐藤 矩行, 高橋 弘樹
    • Organizer
      第77回日本動物学会大会
    • Place of Presentation
      島根大学
    • Year and Date
      2006-09-23
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Analysis of the notochord-specific Ci-Noto4.2006

    • Author(s)
      Yamada, S., Ueno, N., Satoh, N., Takahashi, H.
    • Organizer
      77th Annual meeting for the Japanese Society of Zoolgist.
    • Place of Presentation
      Shimane University.
    • Year and Date
      2006-09-23
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] CRISP(cysteine-rich secretory protein)superfamilyの比較ゲノム解析〜生体防御物質から毒への進化〜2006

    • Author(s)
      青木 美菜子, 高橋 弘樹, 岡 浩太郎, 堀田 耕司
    • Organizer
      第8回日本進化学会大会
    • Place of Presentation
      国立オリンピック記念青少年総合センター
    • Year and Date
      2006-08-30
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Comparative genomics of CRISP superfamily genes.2006

    • Author(s)
      Aoki, M., Takahashi, H., Oka, K., Hotta, K.
    • Organizer
      8th Annual meeting of the Japanese Evolutional Biologists.
    • Place of Presentation
      National Olympics Memorial Youth Center
    • Year and Date
      2006-08-30
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] カタユウレイボヤScabrous-likeとNotchシグナルの神経形成における機能2005

    • Author(s)
      山田 成宏, 佐藤 矩行, 上野 直人, 高橋 弘樹
    • Organizer
      生物の発生,・分化・再生 第4回公開シンポジウム
    • Place of Presentation
      コクヨホール
    • Year and Date
      2005-10-04
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Notochord-derived Scabrous-like protein interact with Notch during neural development.2005

    • Author(s)
      Yamada, S., Satoh, N., Ueno, N. & Takahashi, H.
    • Organizer
      4th symposium of Development, Differentiation and Regeneration.
    • Place of Presentation
      Kokuyo Hall.
    • Year and Date
      2005-10-04
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Notochord derived Scabrous-like regulate long-range patterning of nervous system in Ciona intestinalis embryo2005

    • Author(s)
      Takahashi, H., Yamada, S., Hotta, K., Satoh, N.&Ueno, N.
    • Organizer
      3rd International Tunicate Meeting
    • Place of Presentation
      UCSB,USA
    • Year and Date
      2005-07-12
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Notochord derived Scabrous-like regu late long-range patterning of nervous system in Ciona intestinalis embryo2005

    • Author(s)
      Takahashi, H., Yamada, S., Hotta, K., Satoh, N. & Ueno, N.
    • Organizer
      3rd InternationalTunicate Meeting.
    • Place of Presentation
      USA.
    • Year and Date
      2005-07-12
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Functional analysis of Wnt/PCP-related genes Ciona intestinalis2005

    • Author(s)
      Hotta, K., Gojobori, T., Satoh, N., Ueno, N.&Takahashi, H.
    • Organizer
      4th International Tunicate Meeting
    • Place of Presentation
      UCSB,USA
    • Year and Date
      2005-07-10
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Analysis of Brachyury-downstream notochord-specific gene products during embryogenesis of the ascidian Ciona intestinalis2005

    • Author(s)
      Yamada, S., Satoh, N., Ueno, N.&Takahashi, H.
    • Organizer
      4th International Tunicate Meeting
    • Place of Presentation
      UCSB,USA
    • Year and Date
      2005-07-10
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Functional analysis of Wnt/PCP-related genes Ciona intestinalis.2005

    • Author(s)
      Hotta, K., Gojobori, T., Satoh, N., Ueno, N. & Takahashi, H.
    • Organizer
      4th International Tunicate Meeting.
    • Place of Presentation
      USA.
    • Year and Date
      2005-07-10
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Analysis of Brachyury-downstream notochord-specific gene products during embryogenesis of the ascidian Cionaintestinalis.2005

    • Author(s)
      Yamada, S., Satoh, N., Ueno, N. & Takahashi, H.
    • Organizer
      4th International Tunicate Meeting.
    • Place of Presentation
      USA.
    • Year and Date
      2005-07-10
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] カタユウレイボヤScabrous-likeとNotchシグナルの神経形成における機能2005

    • Author(s)
      山田 成宏, 佐藤 矩行, 上野 直人, 高橋 弘樹
    • Organizer
      第38回日本発生生物学会大会
    • Place of Presentation
      仙台国際センター
    • Year and Date
      2005-06-03
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Notochord-derived Scabrous-like protein interact with Notch during neural development.2005

    • Author(s)
      Yamada, S., Satoh, N., Ueno, N. & Takahashi, H.
    • Organizer
      38th Annual meeting for the Japanese society of Developmental Biologists.
    • Place of Presentation
      Sendai international center.
    • Year and Date
      2005-06-03
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary

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Published: 2005-04-01   Modified: 2016-04-21  

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