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A Study of Relationship between Mammalian Specific Features and Gene Diversification on the Basis of Genome Comparisons.

Research Project

Project/Area Number 17570188
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Evolutionary biology
Research InstitutionKyoto University

Principal Investigator

KUMA Keiichi  Kyoto University, Institute for Chemical Research, Researcher, 化学研究所, 研究員 (10221938)

Project Period (FY) 2005 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥2,300,000 (Direct Cost: ¥2,300,000)
Fiscal Year 2006: ¥700,000 (Direct Cost: ¥700,000)
Fiscal Year 2005: ¥1,600,000 (Direct Cost: ¥1,600,000)
KeywordsMammals / Morphological evolution / Genome database / Comparative genome / Homology search / Multiple alignment / Phylogenetic tree / Maximum likelihood method
Research Abstract

In the field of evolutionary biology, it is very important to understand the relationship between evolution at the morphological level and that at the molecular level. Mammals have some unique morphological characters, which are not found in birds and reptiles: body hair, big brain, viviparity, and sensitive olfactory organ. In order to investigate the relationship between these mammalian specific morphological features and diversification of genes that were involved in the evolution of these characters, genome sequences of several vertebrate species including human, mouse, bovine, opossum, chicken, African clawed frog, etc. are compared. An exhaustive homology search of the genes among these species suggested that members of 203 gene families were diversified by duplications only in the lineage of mammals. In these gene families, I also found that several genes involved in the development of brain or central nervous system were produced by duplications in the early stage of mammalian evolution. The result of this study had been reported in the 7th annual meeting of the Society of Evolutionary Studies, Japan.

Report

(3 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • Research Products

    (5 results)

All 2006 2005

All Journal Article (5 results)

  • [Journal Article] Positive selection in the ComC-ComD system of streptococcal species.2006

    • Author(s)
      Ichihara, H.
    • Journal Title

      J. Bacteriol. 188(17)

      Pages: 6429-6434

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Identification of rDNA-specific non-LTR retrotransposons in Cnidaria.2006

    • Author(s)
      Kojima, K.
    • Journal Title

      Mol. Biol. Evol. 23(10)

      Pages: 1984-1993

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] 実践的マルチプルアライメント2006

    • Author(s)
      加藤 和貴
    • Journal Title

      化学と生物 44(2)

      Pages: 102-108

    • Related Report
      2005 Annual Research Report
  • [Journal Article] 実践的系統樹推定法:原理と特徴、樹形の信頼性評価、およびソフトウェア2006

    • Author(s)
      隈 啓一
    • Journal Title

      化学と生物 44(3)

      Pages: 185-191

    • NAID

      10017248242

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Improvement in accuracy of multiple alignment program MAFFT.2005

    • Author(s)
      Katoh, K.
    • Journal Title

      Genome Informatics 16(1)

      Pages: 22-33

    • Related Report
      2005 Annual Research Report

URL: 

Published: 2005-04-01   Modified: 2016-04-21  

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