• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Evolution of Globin and Hatching Enzyme Genes in Teleosts

Research Project

Project/Area Number 17570189
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Evolutionary biology
Research InstitutionSophia University

Principal Investigator

IUCHI Ichiro  Sophia University, Institute of Science and Technology, Professor (10011694)

Co-Investigator(Kenkyū-buntansha) YASUMASU Shigeki  Sophia University, Institute of Science and Technology, Professor (00222357)
IUCHI Ichiro  Sophia University, Institute of Science and Technology, Professor (10011694)
Project Period (FY) 2005 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥330,000)
Fiscal Year 2007: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2006: ¥1,100,000 (Direct Cost: ¥1,100,000)
Fiscal Year 2005: ¥1,500,000 (Direct Cost: ¥1,500,000)
KeywordsGene / Genome / Evolution / Protein / Hemoglobin / Hatching Enzyme / 卵化酵素 / 蛋白質 / グロビン / メダカ / 硬骨魚
Research Abstract

In the present research project, we clarified three characteristics of globin gene structure and expression in medaka: 1) head-to-head orientation of major α and β globin genes, 2) existence of cis-regulatory regions responsible for spatio-temporal expression of the genes 1Kb-5'upstream to the respective genes, 3) localization of the globin genes in 2 clusters on 2 chromosomes. Molecular phylogenetic analysis showed that all the teleostean globin genes were assigned into 4 groups, and in the medaka genome, the genes for one of the 4 that functions as an adult globin were pseudogenized during evolution.
In addition, we identified hatching enzyme genes in the genomes of about 30 teleosts. The results showed that the hatching enzyme genes in fishes belonging to Elopomorpha were ancestral, and were diversified into 2 groups of genes in the descendants Otocephara and Euteleostei. Especially, the EICE genes of Euteleostei would be established by "phylogeny-dependent, step-by-step intron-loss" evolution.
The evolutionary feature of globin and hatching enzyme genes reflects a characteristic of Teleost such that they could adapt in extremely diversified environments during evolution.

Report

(4 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • 2005 Annual Research Report
  • Research Products

    (17 results)

All 2008 2007 2006 2005 Other

All Journal Article (14 results) (of which Peer Reviewed: 6 results) Presentation (3 results)

  • [Journal Article] Hatching enzyme of ovoviviparous black rockfish Sebastes schlegelii:environmental adaptation of hatching enzyme and evolutionary aspects of formation of pseudogene2008

    • Author(s)
      Kawaguchi, M., Nakagawa, M., Noda, T., Yoshizaki, N., Hiroi, J., Nishida, M., Iuchi, I., Yasumasu, S.
    • Journal Title

      FEBS Journal (In Press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Hatching enzyme of ovoviviparous black rockfish Sebastes schlegelii : environmental adaptation of hatching enzyme and evolutionary aspects of formation of pseudogene2008

    • Author(s)
      Kawaguchi, M., Nakagawa, M., Noda, T., Yoshizaki, N., Hiroi, J., Nishida, M., Iuchi, I., Yasumasu, S
    • Journal Title

      FEBS Journal (In Press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Hatching enzyme of ovoviviparous black rockfish Sebastes schlegelii:environmental adaptation of hatching enzyme and evolutionary aspects of formation of pseudogene2008

    • Author(s)
      Kawaguchi, M., Nakagawa, M. Noda, T. Yoshizaki, N. Hiroi, J. Nishida, M. Iuchi, I. Yasumasu, S
    • Journal Title

      FEBS Journal (In Press)

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Globin Gene Enhancer Activity of a DNase-l Hypersensitive Site-40 Homolog in Medaka,Oryzias latipes2007

    • Author(s)
      Maruyama K, Ishikawa Y, Yasumasu S, luchi I
    • Journal Title

      Zool.Sci. 24

      Pages: 997-1004

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Analysis of the exon-intron structures of fish,amphibian,bird and mammalian hatching enzyme genes,with special reference to the intron loss evolution of hatching enzyme genes in Teleostei2007

    • Author(s)
      Kawaguchi, M., Yasumasu, S., Hiroi.J., Naruse, N., Suzuki, T.and luchi, I.
    • Journal Title

      Gene 392

      Pages: 77-88

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Globin Gene Enhancer Activity of a DNase-I Hypersensitive Site-40 Homolog in Medaka, Oryzias latipes2007

    • Author(s)
      Maruyama, K, Ishikawa, Y, Yasumasu, S, Iuchi, I
    • Journal Title

      Z001. Sci 24

      Pages: 997-1004

    • NAID

      40016396313

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Analysis of the exon-intron structures of fish, amphibian, bird and mammalian hatching enzyme genes, with special reference to the intron loss evolution of hatching enzyme genes in Teleostei2007

    • Author(s)
      Kawaguchi, M., Yasumasu, S., Hiroi, J., Naruse, N., Suzuki, T. and Iuchi, I
    • Journal Title

      Gene 392

      Pages: 77-88

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Globin Gene Enhancer Activity of a DNase-I Hypersensitive Site-40 Homolog in Medaka,Oryzias latipes2007

    • Author(s)
      Maruyama K, Ishikawa Y, Yasumasu S, Iuchi I
    • Journal Title

      Zool.Sci 24

      Pages: 997-1004

    • NAID

      40016396313

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Analysis of the exon-intron structures of fish,amphibian,bird and mammalian hatching enzyme genes,with special reference to the intron loss evolution of hatching enzyme genes in Teleostei2007

    • Author(s)
      Kawaguchi, M., Yasumasu, S., Hiroi, J., Naruse, N., Suzuki, T., Iuchi, I
    • Journal Title

      Gene 392

      Pages: 77-88

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Analysis of the exon-intron structures of fish, amphibian, bird and mammalian hatching enzyme genes, with special reference to the intron loss evolution of hatching enzyme genes in Teleostei2007

    • Author(s)
      Kawaguchi, Yasumasu, Hiroi, Naruse, Suzukiho, Iuchi
    • Journal Title

      Gene in press

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Evolution of teleostean hatching enzyme genes and their paralogous genes.2006

    • Author(s)
      Kwaguchi, Yasumasu, Hiroi, Naruse, Inoue, Ichiro Iuchi
    • Journal Title

      Dev Genes Evol. 216

      Pages: 769-784

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Thyroid hormone-induced expression of a bZip-containing transcription factor activates epithelial cell proliferation during Xenopus larval-to-adult intestinal remodeling2006

    • Author(s)
      Ikuzawa M, Shimizu K, Yasumasu S, Iuchi I, Shi YB, Ishizuya-Oka A.
    • Journal Title

      Dev Genes Evol. 216

      Pages: 109-118

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Purification and gene cloning of Fundulus heteroclitus hatching enzyme : A hatching enzyme system composed of high choriolytic enzyme(HCE) and low choriolytic enzyme(LCE) is conserved between two different teleosts, F.heteroclitus and medaka Oryzias latipes.2005

    • Author(s)
      Kawaguchi, M., Yasumasu, S., Shimizu, A., Hiroi, J., Yoshizaki, N., Nagata, K., Tanokura, M., luchi, I.
    • Journal Title

      FEBS J. 272

      Pages: 4315-4326

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Expression of CCAAT/enhancer binding protein δ is closely associated with degeneration of surface mucous cells of larval stomach during the metamorphosis of Xenopus laevis.2005

    • Author(s)
      Ikuzawa, M., Kobayashi, Yasumasu, S., K., Iuchi.I.
    • Journal Title

      Comp.Biochem.Physiol.B.Biochem.Mol.Biol. 140

      Pages: 505-511

    • Related Report
      2005 Annual Research Report
  • [Presentation] 卵胎生魚クロソイの孵化酵素LCE遺伝子における偽遺伝子形成過程2007

    • Author(s)
      川口 眞理, 安増 茂樹, 廣井 準也, 中川 雅弘, 野田 勉, 井内 一郎
    • Organizer
      進化学会
    • Place of Presentation
      京都
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] 卵胎生魚クロソィの艀化酵素LCE遺伝子における偽遺伝子形成過程2007

    • Author(s)
      川口 真理、安増 茂樹、廣井 準也、中川 雅弘、野田 勉、井内 一郎
    • Organizer
      進化学会
    • Place of Presentation
      京都
    • Related Report
      2007 Annual Research Report
  • [Presentation] Pseudogenization of LCE(One of Hatching Enzyme) Gene in Ovoviviparous Black Rockfish Sebastes schlegelii

    • Author(s)
      Kawaguchi, M., Yasumasu, S., Hiroi, J., Nakagawa, M., Noda, T., Iuchi, I
    • Organizer
      Society of Evolutionary Studies, Japan
    • Place of Presentation
      Kyoto
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary

URL: 

Published: 2005-04-01   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi