Analysis of a novel protein conjugation system relating to ubiquitin-like protein RURM1 of rice
Project/Area Number |
17580005
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Research Category |
Grant-in-Aid for Scientific Research (C)
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Allocation Type | Single-year Grants |
Section | 一般 |
Research Field |
Breeding science
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Research Institution | Kyoto University |
Principal Investigator |
NAKAZAKI Tetsuya Kyoto University, Graduate School of Agriculture, Lecturer (60217693)
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Co-Investigator(Kenkyū-buntansha) |
TANISAKA Takatoshi Kyoto University, Graduate School of Agriculture, Professor (80026591)
OKUMOTO Yutaka Kyoto University, Graduate School of Agriculture, Associate Professor (90152438)
HORIBATA Akira Kinki University, Faculty of Biology-Oriented Science, Lecturer (70258060)
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Project Period (FY) |
2005 – 2007
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Project Status |
Completed (Fiscal Year 2007)
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Budget Amount *help |
¥3,300,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2007: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2006: ¥1,100,000 (Direct Cost: ¥1,100,000)
Fiscal Year 2005: ¥900,000 (Direct Cost: ¥900,000)
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Keywords | mPing / Transposon / Rurm 1 system / Rice / Mutant line IM294 / Rurmlシステム / RURM1システム |
Research Abstract |
Transposable activity of an active-transposon mPing in a rice mutant line, IM294 is much higher than in the original variety Gimbozu. Because IM294 is considered harboring a recessive mutation allele at Rurm1 locus, it is very likely that the destruction of the normal Rurm1 gene participates in high mPing transposable activity of IM294. We analyzed a change to occur by function loss of the Rurm1 gene to elucidate a novel rice protein conjugation system relating to the RURM1 protein (Rurm1 system), and this study was going to get the due to clarify the induction mechanism for the transposition of mPing. At first in this study, we analyzed the influence that the function loss of Rurm1 gave transposition frequency of mPing using the transposon display method. As a result, high-frequency transposition of mPing relation to the function loss of Rum/ was confirmed in a various genetic background, and it was suggested that the function loss of Rurm1 was one of the causes to raise transposition frequency of mPing (preparing for submission). In addition, we successfully established the system to purifying RURM1 protein with bacterial recombinant protein expression system including detection of a culture condition to produce soluble non-denaturation RURM1 protein. Anti-RURM1 antibody was obtained with the purified recombinant RURM1 protein and the provided anti-RURM1 antibody confirmed specific recognition for RURM1 protein This anti-RURM1 antibody would be useful to identify proteins, which participate in a RURM1 protein conjugation system. Furthermore, in this study, a TOR (target of rapamycin) gene of the rice was identified and an expression analysis was performed. Then, it was found possibility that the protein conjugation system for RURM1 protein (urmylation) bears an essential role in the mechanism for controlling cell division in rice plant.
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Report
(4 results)
Research Products
(53 results)
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[Journal Article] Gene cloning, expression, purification and characterization of rice (Oryza sativa L.) class II chitinase CHT112008
Author(s)
Xayphakatsa, K., T., Tsukiyama, K., Inoue, Y., Okumoto, T., Nakazaki, T., Tanisaka
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Journal Title
Enzyme and Microbial Tchnology (in press)
Description
「研究成果報告書概要(欧文)」より
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[Journal Article] Active transposons in rice2008
Author(s)
Nakazaki, T., K., Naito, Y., Okumoto, T., Tanisaka
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Journal Title
Rice Biology in the Genomics Era. H.-Y. Hirano, et. al. (eds.) Springer-Verlag Berlin Heidelbelg
Pages: 69-79
Description
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[Journal Article] Effects of γ-irradiation on transposition activity of the mPing family transposons2007
Author(s)
Iwase, S., Y., Okumoto, T., Tsukiyama, T., Nakazaki, M., Morita, T., Tanisaka
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Journal Title
Kinki, J. Crop Sci. Breed 52
Pages: 69-72
Description
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[Journal Article] A Novel transposon Pyong in the japonica rice variety Gimbozu2007
Author(s)
Oki, N., Y., Okumoto, T., Tsukiyama, K., Naito, T., Nakazaki, T., Tanisaka
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Journal Title
Kinki J. Crop Sci. Breed 52
Pages: 39-43
Description
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[Presentation] mPing SCAR markers : a resolution to sturated linkage map construction using japonica x japonica cross2007
Author(s)
Monden, Y., K., Naito, D., Saoto, N., Oki, O., Ideta, T., Nakazaki, T., Tsukiyama, Y., Okumoto, T., Tanisaka
Organizer
112th Meeting of The Japanese Society of Breeding
Place of Presentation
Yamagata University, Sakata
Year and Date
2007-09-23
Description
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[Presentation] Destruction of rice ubiquitin-related modifier-1, Rurm1, enhances the transposition activity of transposable elements2007
Author(s)
Tamura, K., T., Tsukiyama, Y., Okumoto, H., Horibata, H., Inagaki, T., Nakazaki, T., Tanisaka
Organizer
112th Meeting of The Japanese Society of Breeding
Place of Presentation
Yamagata University, Sakata
Year and Date
2007-09-23
Description
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[Presentation] Purification of ABA-induced rice class II chitinase CHT11 using bacterial recombinant protein expression system2007
Author(s)
Xayphakatsa, K., T., Tsukiyama, K., Inoue, Y., Okumoto, T., Nakazaki, T., Tanisaka
Organizer
111th Meeting of The Japanese Society of Breeding
Place of Presentation
Ibaragi University Mito
Year and Date
2007-03-31
Description
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[Presentation] Transpososon display of mutations on quantitative traits induced by the endogenous active transposon, mPing in rice (Oriza saliva L)2006
Author(s)
Horibata, A., K., Matsui, E., Inoue, T., Yoshihiro, H., Kawaji, M., Nakagawa, Y., Okumoto, T., Nakazaki, T., Tanisaka
Organizer
110th Meeting of The Japanese Society of Breeding
Place of Presentation
Ehime University, Matsuyama
Year and Date
2006-09-23
Description
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[Presentation] Uncovering the factor having induced the burst of mPing in a japonica rice cultivar Gimbozu2006
Author(s)
Naito, K., Y., Okumoto, Y., Monden, T., Nakazaki, T., Tanisaka
Organizer
110th Meeting of The Japanese Society of Breeding
Place of Presentation
Ehime University, Matsuyama
Year and Date
2006-09-23
Description
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[Presentation] Destruction of RuRm1 (Rice ubiguitin-related modifier-1) enhances the transposition activity of mPing2006
Author(s)
Tamura, K., N., Oki, T., Tsukiyama, Y., Okumoto, T., Nakazaki, T., Tanisaka
Organizer
110th Meeting of The Japanese Society of Breeding
Place of Presentation
Ehime University, Matsuyama
Year and Date
2006-09-23
Description
「研究成果報告書概要(欧文)」より
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[Presentation] Different forms of mPing MITE in wild Oryza species2006
Author(s)
Karki, S., K., Naito, Y., Okumoto, T., Tsukiyama, T., Nakazaki, T., Tanisaka
Organizer
110th Meeting of The Japanese Society of Breeding
Place of Presentation
Ehime University, Matsuyama
Year and Date
2006-09-23
Description
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[Presentation] Identification of Pyong-like elements in the genome of Nipponnbare and wild rice species2006
Author(s)
Oki, N., Y., Okumoto, T., Tsukiyama, K., Naito, T., Nakazaki, T., Tanisaka
Organizer
110th Meeting of The Japanese Society of Breeding
Place of Presentation
Ehime University, Matsuyama
Year and Date
2006-09-23
Description
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[Presentation] Cloning, bacterial expression and purification of rice (Oryza saliva L.) novel ubiquitin-related protein RURM12006
Author(s)
Tsukiyama, T., J., Lee, K., Inoue, Y., Okumoto, T., Nakazaki, T., Tanisaka
Organizer
109th Meeting of The Japanese Society of Breeding
Place of Presentation
Tokyo University of Agriculture & Technology, Tokyo
Year and Date
2006-03-30
Description
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[Presentation] Purification of a novel rice ubiquitin-like protein RURM1 using GST-fusion protein expression system2006
Author(s)
Lee, J., T., Tanisaka, Tsukiyama, Y., Okumoto, T., Nakazaki, T., K., Inoue
Organizer
Annual Meeting of JSBBA 2006
Place of Presentation
Kyoto Women's University, Kyoto
Year and Date
2006-03-26
Description
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[Presentation] Purification of a rice ubiquitin-like protein RURM12005
Author(s)
Lee, J., T., Tanisaka, Tsukiyama, Y., Okumoto, T., Nakazaki, T.K., Inoue
Organizer
Annual Meeting of JSBBA Kansai, Chu-shikoku and Nishi-Nihon branch 2005
Place of Presentation
Osaka University, Suita
Year and Date
2005-10-01
Description
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[Presentation] Genetic factors responsible for the mobility of mPing in the rice genome2005
Author(s)
Onishi, A., T., Tsukiyama, Y., Okumoto, S., Yamahira, M., Morita, T., Nakazaki, T., Tanisaka
Organizer
107, 108th Meeting of The Japanese Society of Breeding
Place of Presentation
Tsukuba University, Tsukuba
Year and Date
2005-08-21
Description
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[Presentation] Identification of a novel transposon Pyong in japonica rice variety Gimbozu2005
Author(s)
Oki, N., Y., Okumoto, T., Tsukiyama, T., Nakazaki, T., Tanisaka
Organizer
107, 108th Meeting of The Japanese Society of Breeding
Place of Presentation
Tsukuba University, Tsukuba
Year and Date
2005-08-21
Description
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