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Synthesis of a-linked oligosaccharides by engineered enzymes

Research Project

Project/Area Number 17580076
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied biochemistry
Research InstitutionHOKKAIDO UNIVERSITY

Principal Investigator

MORI Haruhide  Hokkaido Univ., Res.Fac. of Agric., Asso.Prof., 大学院農学研究院, 助教授 (80241363)

Project Period (FY) 2005 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥3,600,000 (Direct Cost: ¥3,600,000)
Fiscal Year 2006: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 2005: ¥2,800,000 (Direct Cost: ¥2,800,000)
Keywordstransglycosylation / oligosaccharide / alpha-amylase family / alpha-glucosidase / site-directed mutagenesis / α-アミラーゼファミリー / α-グルコシダーゼ
Research Abstract

The aim of this project was to establish new methods to synthesize alpha-linked oligosaccharides using engineered carbohydrate-hydrolysing enzymes. I focused the following two points : 1. establishment the new reaction suitable for oligosaccharide synthesis using catalytic residue-mutated "inactive" hydrolases. 2. changing specificities of the enzyme and screening enzymes showing novel specificities. In the point-1, a new basic method effective for oligosaccharide synthesis was developed, and through the point-2, wide varieties of oligosaccharide would be prepared.
Point-1, catalytic residues mutants of dextran glucosidase from Streptococcus mutans oligo-1,6-glucosidase from Bacillus subtilis, and other enzymes were generated, and applied for oligoshaccharide synthesis. The conditions were optimized. One example was panose produced from alpha-glucosyl fluoride and maltose in high yield of 71% by the "inactive" hydrolase, while the wild-type "active" enzyme also produced panose, but subs … More equently hydolrolysed it, resulting in low yield of 16%.
Point-2. Substrate specificity was changed in some enzymes. Dextran glucosidase from S. mutans was the mostly engineered enzyme. Dependency of activity on chain length of substrates was modulated, and a mutant dextran glucosidase lost activity for dextran, but preferred trisaccharide. The strictly restricted alpha-1,6 specificity was also altered into alpha-1,4 specificity without significant decrease in reaction velocity. E. coli alpha-xylosidase was also successfully engineered to be an alpha-glucoside hydrolase. Point-2B, the wide variety of enzymes were screened. Alpha-glucosidases from some varieties of rice and honeybee were purified, characterized, and sequenced, as well as recombinant protein production. Particularly, we found that some rice enzymes were able to act on starch granules. Alpha-glucosidase I from European honeybee exhibited very high transglucosylation even though high amino acid identity of 40% was retained with alpha-glucosidase II and III from the honeybee. Less

Report

(3 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • Research Products

    (36 results)

All 2007 2006 2005

All Journal Article (36 results)

  • [Journal Article] Multiple forms of α-glucosidase in rice seeds (Oryza sativa L, var Nipponbare)2007

    • Author(s)
      Nakai H
    • Journal Title

      Biochimie 89(1)

      Pages: 49-62

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Molecular Cloning of cDNAs and Genes for Three α-Glucosidases from European Honeybees, Apis mellifera L., and Heterologous Production of Recombinant Enzymes in Pichia pastoris2007

    • Author(s)
      Nishimoto M
    • Journal Title

      Biosci. Biotechnol. Biochem (accepted)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Multiple forms of a-glucosidase in rice seeds (Oryza sativa L, var Nipponbare).2007

    • Author(s)
      Nakai H, et al.
    • Journal Title

      Biochimie 89(l)

      Pages: 49-62

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Molecular Cloning of cDNAs and Genes for Three α-Glucosidases from European Honeybees, Apis mellifera L., and Heterologous Production of Recombinant Enzymes in Pichia pastoris2007

    • Author(s)
      Nishimoto M, et al.
    • Journal Title

      Biosci.Biotechnol.Biochem. (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Structural elements in dextran glucosidase responsible for high specificity to long chain substrate.2006

    • Author(s)
      Saburi, W.
    • Journal Title

      Biochim. Biophys. Acta 1764(4)

      Pages: 688-698

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Identification and manipulation of subsite structure and starch granule binding site in plant α-amylase 「植物α-アミラーゼの機能と構造に関する研究」2006

    • Author(s)
      Mori, H.
    • Journal Title

      J. Appl. Glycosci. 53(1)

      Pages: 6-6

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Developmental regulation of photosynthate distribution in leaves of rice2006

    • Author(s)
      Shinano, T
    • Journal Title

      Photosynthetica 44(1)

      Pages: 1-10

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Structural elements to convert Eschelichia coli α-xylosidase (YicI) into α-glucosidase2006

    • Author(s)
      Okuyama M
    • Journal Title

      FEBS Lett 580(11)

      Pages: 2707-2711

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Interactions between Barley α-Amylases, Substrates, Inhibitors and Regulatory Proteins2006

    • Author(s)
      Hachem MA
    • Journal Title

      J Appl Glycosci 53(2)

      Pages: 163-169

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Plant α-glucosidase : Molecular analysis of rice α-glucosidase and degradation mechanism of starch granules in germinating stage2006

    • Author(s)
      Nakai H
    • Journal Title

      J Appl Glycosci 53(2)

      Pages: 137-142

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Purification and characterization of α-glucosidase I from Japanese honeybee (Apis cerana japonica) and molecular cloning of its cDNA2006

    • Author(s)
      Wongchawalit J
    • Journal Title

      Biosci Biotechnol Biochem 70(12)

      Pages: 2889-2898

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Developmental regulation of photosynthate distribution in leaves of rice2006

    • Author(s)
      Shinano, T., et al.
    • Journal Title

      Photosynthetica 44(1)

      Pages: 1-10

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Identification and Manipulation of Subsite Structure and Starch Granule Binding Site in Plant α-Amylase (Award Proceeding in Distinguished Young Scientist Award of JSAG)2006

    • Author(s)
      Mori, H
    • Journal Title

      J Appl. Glycosci. 53(1)

      Pages: 51-56

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Structural elements in dextran glucosidase responsible for high specificity to long chain substrate.2006

    • Author(s)
      Saburi W, et al.
    • Journal Title

      Biochim. Biophys. Acta 1764(4)

      Pages: 688-698

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Structural elements to convert Escherichia coli α-xylosidase (YicI) into a-glucosidase.2006

    • Author(s)
      Okuyama M
    • Journal Title

      FEBS Lett 580(11)

      Pages: 2707-2711

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Interactions between Barley α-Amylases, Substrates, Inhibitors and Regulatory Proteins2006

    • Author(s)
      Hachem MA, et al.
    • Journal Title

      J Appl Glycosci 53(2)

      Pages: 163-169

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Plant a-glucosidase : Molecular analysis of rice α-glucosidase and degradation mechanism of starch granules in germinating stage2006

    • Author(s)
      Nakai H, et al.
    • Journal Title

      J Appl Glycosci 53(2)

      Pages: 137-142

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Purification and characterization of α-glucosidase I from Japanese honeybee (Apis cerana japonica) and molecular cloning of its cDNA.2006

    • Author(s)
      Wongchawalit J, et al.
    • Journal Title

      Biosci Biotechnol Biochem 70(12)

      Pages: 2889-2898

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Structural elements in dextran glucosidase responsible for high specificity to long chain substrate.2006

    • Author(s)
      Saburi, W.
    • Journal Title

      Biochim.Biophys.Acta 印刷中

      Pages: 11-11

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Identification and manipulation of subsite structure and starch granule binding site in plant α-amylase「植物α-アミラーゼの機能と構造に関する研究」2006

    • Author(s)
      Mori, H.
    • Journal Title

      J.Appl.Glycosci. 53(1)

      Pages: 6-6

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Oligosaccharide binding to barley α-amylase 12005

    • Author(s)
      Robert, X.
    • Journal Title

      J. Biol. Chem. 280(38)

      Pages: 32968-32978

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Purification and characterization of hyper-glycosylated extracellular α-glucosidase from Schizosaccharomyces pombe2005

    • Author(s)
      Okuyama, M.
    • Journal Title

      Enzyme Microbial. Technol. 37(5)

      Pages: 472-480

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Glucoamylase originating from Schwanniomyces occidentalis is a typical α-glucosidase.2005

    • Author(s)
      Sato, F
    • Journal Title

      Biosci. Biotechnol. Biochem. 69 (10)

      Pages: 1905-1913

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Molecular analysis of α-glucosidase belonging to GH-family 312005

    • Author(s)
      Nakai, H.
    • Journal Title

      Biologia, Bratislava 60 (Suppl.16)

      Pages: 131-135

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Binding of carbohydrates and protein inhibitors to the surface of α-amylases2005

    • Author(s)
      Bozonnet, S.
    • Journal Title

      Biologia, Bratislava 60 (Suppl.16)

      Pages: 27-36

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Oligosaccharide binding to barley α-amylase 12005

    • Author(s)
      Robert X, et al.
    • Journal Title

      J. Biol. Chem. 280(38)

      Pages: 32968-329878

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Purification and characterization of hyper-glycosylated extracellular α-glucosidase from Schizosaccharomyces pombe.2005

    • Author(s)
      Okuyama M, et al.
    • Journal Title

      Enzyme Microbial Technol 37(5)

      Pages: 472-480

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Glucoamylase originating from Schwanniomyces occidentalis is a typical α-glucosidase.2005

    • Author(s)
      Sato, F, et al.
    • Journal Title

      Biosci.Biotechnol.Biochem. 69 (10)

      Pages: 1905-1913

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Binding of carbohydrates and protein inhibitors to the surface of α-amylases2005

    • Author(s)
      Bozonnet, S, et al.
    • Journal Title

      Biologia, Bratislava 60(Suppl.16)

      Pages: 27-36

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Molecular analysis of a-glucosidase belonging to GH-family 31.2005

    • Author(s)
      Nakai, H, et al.
    • Journal Title

      Biologia, Bratislava 60(Suppl.16)

      Pages: 131-135

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Enzymatic synthesis of α-2-glucosides by alcohols resistant α-glucosidase from Aspergillus niger.2005

    • Author(s)
      Kim, Y-M
    • Journal Title

      Tetrahedron Asymmetry 16(2)

      Pages: 7-7

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Involvement of Individual Subsites and Secondary Substrate Binding Sites in Multiple Attack on Amylose by Barley α-Amylase2005

    • Author(s)
      Kramhoft, B.
    • Journal Title

      Biochemistry 44(6)

      Pages: 9-9

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Oligosaccharide binding to barley α-amylase 12005

    • Author(s)
      Robert, X.
    • Journal Title

      J.Biol.Chem. 280(38)

      Pages: 11-11

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Glucoamylase originating from Schwanniomyces occidentalis is a typical α-glucosidase.2005

    • Author(s)
      Sato, F
    • Journal Title

      Biosci.Biotechnol.Biochem. 69(10)

      Pages: 9-9

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Molecular analysis of α-glucosidase (GH-family 31).2005

    • Author(s)
      Nakai, H.
    • Journal Title

      Biologia, Bratislava 60(Suppl.16)

      Pages: 5-5

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Binding of carbohydrates and protein inhibitors to the surface of α-amylases2005

    • Author(s)
      Bozonnet, S.
    • Journal Title

      Biologia, Bratislava 60(Suppl.16)

      Pages: 10-10

    • Related Report
      2005 Annual Research Report

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Published: 2005-04-01   Modified: 2016-04-21  

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