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Study of hypermethylated and cancer-related genes in the early stage of lung adenocarcinoma.

Research Project

Project/Area Number 17590292
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Human pathology
Research InstitutionUniversity of Tsukuba

Principal Investigator

NOGUCHI Masayuki (2007)  University of Tsukuba, Graduate School of Comprehensive Human Sciences, Professor (00198582)

飯嶋 達生 (2005-2006)  筑波大学, 大学院人間総合科学研究科, 講師 (40222799)

Co-Investigator(Kenkyū-buntansha) 野口 雅之  筑波大学, 大学院人間総合科学研究科, 教授 (00198582)
Project Period (FY) 2005 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥3,770,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥270,000)
Fiscal Year 2007: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2006: ¥1,100,000 (Direct Cost: ¥1,100,000)
Fiscal Year 2005: ¥1,500,000 (Direct Cost: ¥1,500,000)
Keywordslung adenocarcinoma / carcinogenesis / methylation / SAMD14 / ホモローグ / マウス / CpG island / AJマウス / KIF21A / Samd14 / NNK / ACIN1 / MCA / AAH
Research Abstract

Aberrant methylation of promoter CpG islands is known to be a major inactivation mechanism of tumor suppressor and tumor-related genes. In order to identify novel hypermethylated genes in early-stage lung adenocarcinoma, we performed methylated CpG island amplification (MCA), modified suppression subtractive hybridization (SSH) and methylation-specific PCR (MSP) to identify aberrant methylation of CpG islands in the A/J mouse lung adenoma model, which histologically mimics the early stage of human pulmonary adenocarcinoma. Through MCA, SSH and differential screening (DS), we detected five genes that were hypermethylated in mouse adenoma tissue. Among the five genes, three of them have human homologues, and two of the three showed down-regulation of their expression in human lung adenocarcinoma. Of these two genes, we selected sterile alpha motif domain 14 (SAMD14) and further analyzed its methylation status and expression level by methylation-specific PCR (MSP) and quantitative real time PCR (qRT-PCR). Hypermethylation at the CpG site of the SAMD14 promoter region was detected frequently in early invasive adenocarcinoma (8/24, 33.3%) but not in in situ adenocarcinoma (0/7, 0%) or normal lung tissue (0/31, 0%). Most of the lung adenocarcinoma cell lines examined showed suppressed expression of SAMD14 together with hypermethylation at the promoter region, although an immortalized bronchial epithelium cell line (PL16B) did not show hypermethylation and did express SAMD14. These data suggest that methylation of the SAMD14 gene promoter region is a specific event in pulmonary adenocarcinogenesis and is associated with malignant progression.

Report

(4 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • 2005 Annual Research Report
  • Research Products

    (35 results)

All 2008 2007 2006 2005

All Journal Article (25 results) (of which Peer Reviewed: 7 results) Presentation (10 results)

  • [Journal Article] Differentially expressed genes in a porcine adult hepatic stem-like cell line and their expression in developing and regenerating liver2008

    • Author(s)
      Kano J
    • Journal Title

      Lab Invest 88

      Pages: 132-143

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Pathologic radioresponse of preoperatively irradiated invasive thymomas2008

    • Author(s)
      Onuki T
    • Journal Title

      J Thorac Oncol 3

      Pages: 270-276

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Intravascular large B-cell lymphoma with acute abdomen as a presenting symptom in a patient with systemic lupus erythematosus2008

    • Author(s)
      Ishii W
    • Journal Title

      J Thorac Oncol 26

      Pages: 1553-1555

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Differentially expressed genes in a porcine adult hepatic stem-like cell line and their expression in developing and regenerating liver.2008

    • Author(s)
      Kano J
    • Journal Title

      Lab Invest 88

      Pages: 132-143

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Pathologic radioresponse of preoperatively irradiated invasive thymomas.2008

    • Author(s)
      Onuki T
    • Journal Title

      Journal of Thoracic Oncology 3

      Pages: 270-276

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Intravascular large B-cell lymphoma with acute abdomen as a presenting symptom in a patient with systemic lupus erythematosus2008

    • Author(s)
      Ito S
    • Journal Title

      Journal of Clinical Oncology 26

      Pages: 1553-1555

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] OCIA domain containing 2 is highly expressed in advanced bronchioloalveolar carcinoma and associated with better prognosis2007

    • Author(s)
      Ishiyama T
    • Journal Title

      Cancer Sci 98

      Pages: 50-57

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Neuronatin expression and its clinicopathological significance in pulmonary non-small cell carcinoma2007

    • Author(s)
      Uchihara T
    • Journal Title

      J Thorac Oncol 2

      Pages: 796-801

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Comparison of pathologic findings of baseline and annual repeat cancers diagnosed on CT screening2007

    • Author(s)
      Carter D
    • Journal Title

      Lung Cancer 56

      Pages: 193-199

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Gastric T-cell lymphoma with cytotoxic phenotype2007

    • Author(s)
      Sugita S
    • Journal Title

      Pathol Int 57

      Pages: 108-114

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] OCIA domain containing 2 is highly expressed in advanced bronchioloal veolar carcinoma and associated with better prognosis.2007

    • Author(s)
      Ishiyama T
    • Journal Title

      Cancer Sci 98

      Pages: 50-57

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Neuronatin expression and its clinicopathological significance in pulmon ary non-small cell carcinoma.2007

    • Author(s)
      Uchihara T
    • Journal Title

      J Thorac Oncol 2

      Pages: 796-801

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Comparison of pathologic findings of baseline and annual repeat cancers diagnosed on CT screening.2007

    • Author(s)
      Carter D
    • Journal Title

      Lung Cancer 56

      Pages: 193-199

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Gastric T-cell lymphoma with cytotoxic phenotype.2007

    • Author(s)
      Sugita S
    • Journal Title

      Pathol Int 57

      Pages: 108-114

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Expression of the bax inhibitor-1 gene in pulmonary adenocarcinoma2006

    • Author(s)
      Tanaka R
    • Journal Title

      Cancer 106

      Pages: 648-53

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Frequent EGFR mutations in noninvasive bronchioloalveolar carcinoma2006

    • Author(s)
      Matsumoto S
    • Journal Title

      Int J Cance 118

      Pages: 2498-2504

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] The ACIN1 gene is hypermethylated in early stage lung adenocarcinoma2006

    • Author(s)
      Shu Y
    • Journal Title

      J Thorac Oncol 2

      Pages: 160-167

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Characteristics of loss of heterozygosity in large, cell neuroendocrine carcinomas of the lung and small cell lung carcinomas2006

    • Author(s)
      Takeuchi T
    • Journal Title

      Pathol Int 56

      Pages: 434-439

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Analysis of differentially expressed genes in neuroendocrine carcinomas of the lung2006

    • Author(s)
      Okubo C
    • Journal Title

      J Thorac Oncol 1

      Pages: 780-786

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] The ACIN1 gene is hypermethylation in early stage lung adenocarcinoma.2006

    • Author(s)
      Yujian Shu
    • Journal Title

      Journal of Thoracic Oncology 1(2)

      Pages: 160-167

    • Related Report
      2006 Annual Research Report
  • [Journal Article] The ACIN1 gene is hypermethylation in early stage lung adenocarcinoma.2006

    • Author(s)
      Yujian Shu et al.
    • Journal Title

      Journal of Thoracic Oncology (in printing)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Phenotypic characteristics of mouse lung adenoma induced by 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone2005

    • Author(s)
      Okubo C
    • Journal Title

      Mol Carcinogenesis 42

      Pages: 121-126

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Loss of function of p16 gene and prognosis of pulmonary adenocarcinoma2005

    • Author(s)
      Tanaka R
    • Journal Title

      Cancer 103

      Pages: 608-615

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Establishment of immortalized cell line from the preinvasive lesion of lung adenocarcinoma and genes highly expressed in early stage of lung adenocarcinoma development2005

    • Author(s)
      Shimada A
    • Journal Title

      Cancer Sci 96

      Pages: 668-675

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Prognostication of small-sized primary pulmonary adenocarcinomas by histopathological and karyometric analysis2005

    • Author(s)
      Minami Y
    • Journal Title

      Lung Cancer 48

      Pages: 339-348

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Frequent aberrant methylation of gene SAMD 14 in human pulmonary adenocarcinoma.2007

    • Author(s)
      孫衛紅
    • Organizer
      第 48 回日本肺癌学会総会
    • Place of Presentation
      名古屋国際会議場
    • Year and Date
      2007-11-08
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Frequent aberrant methylation of gene SABID 14 in human pulmonary adenocarcinoma2007

    • Author(s)
      Sun W
    • Organizer
      The 48th Annual Meeting of the Japan Lung Cancer Society
    • Place of Presentation
      Nagoya Congress Center
    • Year and Date
      2007-11-08
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Frequent aberrant methylation of gene SAMD 14in human pulmonary adenocarcinoma.2007

    • Author(s)
      孫衛紅
    • Organizer
      第48回日本肺癌学会総会
    • Place of Presentation
      名古屋国際会議場
    • Year and Date
      2007-11-08
    • Related Report
      2007 Annual Research Report
  • [Presentation] Identification of differentially methylated CpG islands in the early stage of human pulmonary adenocarcinoma.2007

    • Author(s)
      Sun, W
    • Organizer
      The 12th World Conference on Lung Cancer
    • Place of Presentation
      Seoul, Korea
    • Year and Date
      2007-09-02
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Annual Research Report 2007 Final Research Report Summary
  • [Presentation] Identification of differentially expressed genes in the course of lung ade nocarcinoma development.2007

    • Author(s)
      Anami, Y
    • Organizer
      The 12th World Conference on Lung Cancer
    • Place of Presentation
      Seoul, Korea
    • Year and Date
      2007-09-02
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Lactoferrin is associated with the sexual difference in the incidence of lung adenocarcinogenesis.2007

    • Author(s)
      Okubo, C
    • Organizer
      The 12th World Conference on Lung Cancer
    • Place of Presentation
      Seoul, Korea
    • Year and Date
      2007-09-02
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Annual Research Report 2007 Final Research Report Summary
  • [Presentation] Identification of differentially methylated CpG islands in the early stage of human pulmonary adenocarcinoma2007

    • Author(s)
      Sun W
    • Organizer
      The 12th World Conference on Lung Cancer
    • Place of Presentation
      Seoul, Korea
    • Year and Date
      2007-09-02
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Identification of differentially expressed genes in the course of lung adenocarcinoma development2007

    • Author(s)
      Anami Y
    • Organizer
      The 12th World Conference on Lung Cancer
    • Place of Presentation
      Seoul, Korea
    • Year and Date
      2007-09-02
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Lactoferrin is associated with the sexual difference in the incidence of lung adenocarcinogenesis2007

    • Author(s)
      Okubo C
    • Organizer
      The 12th World Conference on Lung Cancer
    • Place of Presentation
      Seoul, Korea
    • Year and Date
      2007-09-02
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Presentation] Identification of differentially expressed genes in the course of lung abe nocarcinoma development.2007

    • Author(s)
      Anami Y
    • Organizer
      The 12th World Conference on Lung Cancer
    • Place of Presentation
      Seoul, Korea
    • Year and Date
      2007-09-02
    • Related Report
      2007 Annual Research Report

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Published: 2005-04-01   Modified: 2016-04-21  

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