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Identification of subtype-specific genomic alterations in adult T-cell leukemia/lymphoma

Research Project

Project/Area Number 17590329
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Human pathology
Research InstitutionAichi Cancer Center Research Institute

Principal Investigator

TAGAWA Hiroyuki  Aichi Cancer Center, Molecular Medicine, Researcher, 遺伝子医療研究部, 主任研究員 (30373492)

Project Period (FY) 2005 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥3,700,000 (Direct Cost: ¥3,700,000)
Fiscal Year 2006: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 2005: ¥2,900,000 (Direct Cost: ¥2,900,000)
KeywordsATLL / Array CGH / Genomic alteration / Lymphoma / CARMA1 / Array CG / ゲノム異 / アレイCGH / 成人T細胞性白血病 / リンパ腫 / ゲノム解析 / ゲノムコピー数異常 / 遺伝子増幅
Research Abstract

Aggressive adult T-cell leukemia/lymphoma (ATLL) such as acute and lymphoma types are fatal diseases with poor prognosis. Although these two subtypes feature different clinicopathological characteristics, no detailed comparative analyses of genomic/genetic alterations have been reported. We performed array-based comparative genomic hybridization for 17 acute and 49 lymphoma cases as well as real-time quantitative PCR to identify the target genes of recurrently amplified regions. Comparison of the genome profiles of acute and lymphoma types revealed that the lymphoma type had significantly more frequent gains at 1q, 2p, 4q, 7p and 7q, and losses of 10p, 13q, 16q and 18p, whereas the acute type showed a gain of 3/3p. Of the recurrent high-level amplifications found at 1p36, 6p25, 7p22, 7q and 14q32 in the lymphoma type, we were able to demonstrate that CARMA I is a possible target gene of the 7p22 amplification for the lymphoma type but not for the acute type. Furthermore, we found BCL11B overexpression in acute type irrespective of the 14q32 gain/amplification, while no or low expression of the gene in the lymphoma type. These results suggest that acute and lymphoma types are genomically distinct subtypes, and thus may develop tumors via disti

Report

(3 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • Research Products

    (33 results)

All 2006 2005

All Journal Article (25 results) Patent(Industrial Property Rights) (8 results)

  • [Journal Article] Genomewide array-based comparative genomic hybridization analysis of acute promyelocytic leukemia.2006

    • Author(s)
      Karnan, S.
    • Journal Title

      Genes Chrom. Cancer 45

      Pages: 420-425

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Identification of subtype-specific genomic alterations in aggressive adult T-cell leukemia/lymphoma.2006

    • Author(s)
      Oshiro, A.
    • Journal Title

      Blood 107

      Pages: 4500-4007

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Expression profiling analysis of the CD5+diffuse large B-cell lymphoma subgroup : development of a CD5 signature.2006

    • Author(s)
      Suguro, M.
    • Journal Title

      Cancer Science 97

      Pages: 868-874

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Characterization of target genes at 2p15-16 amplicon in diffuse large B cell lymphoma.2006

    • Author(s)
      Fukuhara, N.
    • Journal Title

      Cancer Science 97

      Pages: 499-504

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Genomewide array-based comparative genomic hybridization analysis of acute promyelocytic leukemia.2006

    • Author(s)
      Karnan, S., Tsuzuki, S., Kiyoi, H., Tagawa, H., Ueda, R., Seto, M., Naoe, T.
    • Journal Title

      Genes Chrom.Cancer 45

      Pages: 420-425

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Identification of subtype-specific genomic alterations in aggressive adult T-cell leukemia/lymphoma.2006

    • Author(s)
      Oshiro, A, Tagawa.H., Ohshima, K., Karube, K., Uike, N., Tashiro, Y., Utsunomiya, A., Masuda, M., Takasu, N., Nakamura, S., Morishima, Y., Seto, M.
    • Journal Title

      Blood

      Pages: 4500-4507

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Expression profiling analysis of the CD5+ diffuse large B-cell lymphoma subgroup : development of a CD5 signature.2006

    • Author(s)
      Suguro, M., Tagawa, H., Kagami, Y., Okamoto, M., Ohchima, K., Shiku, H., Morishima, Y., Nakamura, Y., Seto, M.
    • Journal Title

      Cancer Sci 97

      Pages: 868-874

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Characterization of target genes at the 2p15-16 amplicon in diffuse large B-cell lymphoma.2006

    • Author(s)
      Fukuhara, N., Tagawa, H., Kameoka, Y., Kasugai, Y., Karnan, S., Kameoka, J., Sasaki, T., Morishima, Y., Nakamura, S., Seto, M.
    • Journal Title

      Cancer Sci 97

      Pages: 499-504

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Genomewide array-based comparative genomic hybridization analysis of acute promyelocytic leukemia.2006

    • Author(s)
      Karnan, S.
    • Journal Title

      Genes Chrom.Cancer 45

      Pages: 420-425

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Expression profiling analysis of the CD5+ diffuse large B-cell lymphoma subgroup : development of a CD5 signature.2006

    • Author(s)
      Suguro, M.
    • Journal Title

      Cancer Science 97

      Pages: 868-874

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Characterization of target genes at 2p15-16 amplicon in diffuse large B cell lymphooma.2006

    • Author(s)
      Fukuhara, N.
    • Journal Title

      Cancer Science 97

      Pages: 499-504

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Genome-wide array-based CGH for mantle cell lymphoma : Identification of homozygous deletions of the proapoptotic gene BIM.2005

    • Author(s)
      Tagawa, H.
    • Journal Title

      Oncogene 24

      Pages: 1348-1358

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Comparison of genome profiles for identification of distinct subgroups of diffuse large B-cell lymphoma.2005

    • Author(s)
      Tagawa, H.
    • Journal Title

      Blood 106

      Pages: 1770-1777

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Genome-wide array-based comparative genomic hybridization of Natural killer cell lymphoma/leukemia : Different genomic alteration patterns of aggressive NK-cell leukemia and extranodal NK/T lymphoma, Nasal type.2005

    • Author(s)
      Nakashima, Y.
    • Journal Title

      Genes Chrom. Cancer 44

      Pages: 247-255

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] A microRNA cluster as a target of genomic amplification in malignant lymphoma.2005

    • Author(s)
      Tagawa, H.
    • Journal Title

      Leukemia 19

      Pages: 2013-2016

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Identification of CCND3 and BYSL as Candidate Targets for the 6p21 Amplification in Diffuse Large B-Cell Lymphoma.2005

    • Author(s)
      Kasugai, Y.
    • Journal Title

      Clin. Cancer Res. 11

      Pages: 8265-8272

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Genome-wide array-based CGH for mantle cell lymphoma : Identification of homozygous deletions of the proapoptotic gene BIM.2005

    • Author(s)
      Tagawa, H., Karnan, S., Suzuki, R., Matsuo, K., Zhang, X., Ota, A., Morishima, Y., Nakamura, S., Seto, M.
    • Journal Title

      Oncogene 24

      Pages: 1348-1358

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Comparison of genome profiles for identification of distinct subgroups of diffuse large B-cell lymphoma.2005

    • Author(s)
      Tagawa, H., Suguro, M., Tsuzuki, S., Matsuo, K., Karnan, S., Ohshima, K., Okamoto, M., Morishima, Y., Nakamura, S., Seto, M.
    • Journal Title

      Blood 106

      Pages: 1770-1777

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Genome-wide array-based comparative genomic hybridization of Natural killer cell lymphoma/leukemia Different genomic alteration patterns of aggressive NK-cell leukemia and extranodal NK/T lymphoma, Nasal type.2005

    • Author(s)
      Nakashima, Y., Tagawa, H., Suzuki, R., Karnan, S., Karube, K., Ohshima, K., Muta, K., Nawata, H., Morishima, Y., Nakamura, S., Seto, M.
    • Journal Title

      Genes Chrom. Cancer 44

      Pages: 247-255

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] A microRNA cluster as a target of genomic amplification in malignant lymphoma.2005

    • Author(s)
      Tagawa, H., Seto, M.
    • Journal Title

      Leukemia Correspondence 19

      Pages: 2013-2016

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Identification of CCND3 and BYSL as Candidate Targets for the 6p21 Amplification in Diffuse Large B-Cell Lymphoma.2005

    • Author(s)
      Kasugai, Y., Tagawa, H., Kameoka, Y., Morishima, Y., Nakamura, S., Seto, M.
    • Journal Title

      Clin.Cancer Res. 11

      Pages: 8265-8272

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Comparison of genome profiles for identification of distinct subtype of diffuse large B-cell lymphoma2005

    • Author(s)
      Tagawa H, Suguoro K, et al.
    • Journal Title

      Blood 106

      Pages: 1770-1777

    • Related Report
      2005 Annual Research Report
  • [Journal Article] A microRNA cluster as a target of genomic amplification in malignant lymphoma.2005

    • Author(s)
      Tagawa H, Seto M
    • Journal Title

      Leukemia 19

      Pages: 2013-2016

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Identification of BYSL and CCND3 as targets of genomic amplification of diffuse large B-cell lymphoma.2005

    • Author(s)
      Kasugai Y, Tagawa H, et al.
    • Journal Title

      Clinical Cancer Research 11

      Pages: 8265-8272

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Genome-wide array-based comparative genomic hybridization of natural killer cell lymphoma/leukemia : Different genomic alteration patterns of aggressive NK-cell leukemia and extranodal NK/T-cell lymphoma, nasal type.2005

    • Author(s)
      Nakajima S, Tagawa H, et al.
    • Journal Title

      Genes Chromosomes Cancer 44

      Pages: 247-255

    • Related Report
      2005 Annual Research Report
  • [Patent(Industrial Property Rights)] びまん性大細胞方型B細胞リンパ腫の病型の診断方法及び予後診断の方法2006

    • Inventor(s)
      瀬戸加大他3名
    • Industrial Property Rights Holder
      愛知県, 日本ガイシ
    • Filing Date
      2006-04-19
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Patent(Industrial Property Rights)] 生物体のタイプを判別するためのマーカーの選択方法及び選択されたマーカーの利用2006

    • Inventor(s)
      瀬戸加大他4名
    • Industrial Property Rights Holder
      愛知県, 日本ガイシ, 三重大学
    • Filing Date
      2006-08-25
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Patent(Industrial Property Rights)] びまん性大細胞方型B細胞リンパ腫の病型の診断方法及び予後診断の方法2006

    • Inventor(s)
      瀬戸 加大 他3名
    • Industrial Property Rights Holder
      愛知県, 日本ガイシ
    • Filing Date
      2006-04-19
    • Related Report
      2006 Annual Research Report
  • [Patent(Industrial Property Rights)] 生物体のタイプを判別するためのマーカーの選択方法及び選択されたマーカーの利用2006

    • Inventor(s)
      瀬戸 加大 他4名
    • Industrial Property Rights Holder
      愛知県, 日本ガイシ, 三重大学
    • Filing Date
      2006-08-25
    • Related Report
      2006 Annual Research Report
  • [Patent(Industrial Property Rights)] Method for prognosis B-cell lymphoma2005

    • Inventor(s)
      瀬戸加大他3名
    • Industrial Property Rights Holder
      愛知県, 日本ガイシ
    • Filing Date
      2005-04-19
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Patent(Industrial Property Rights)] 悪性リンパ腫の診断及び予後診断の方法2005

    • Inventor(s)
      瀬戸加大他3名
    • Industrial Property Rights Holder
      愛知県, 日本ガイシ
    • Filing Date
      2005-12-05
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Patent(Industrial Property Rights)] 遺伝子検出方法、及びDNAマイクロアレイ2005

    • Inventor(s)
      瀬戸加大他3名
    • Industrial Property Rights Holder
      愛知県, 日本ガイシ
    • Filing Date
      2005-09-12
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Patent(Industrial Property Rights)] 悪性リンパ腫の診断および予後診断の方法2005

    • Inventor(s)
      瀬戸 加大, 田川 博之, 吉田 安子, 吉良 茂樹
    • Industrial Property Rights Holder
      愛知県
    • Filing Date
      2005-12-05
    • Related Report
      2005 Annual Research Report

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Published: 2005-04-01   Modified: 2016-04-21  

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