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Mechanism of maturation of herpesvirus genome DNA

Research Project

Project/Area Number 17590420
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Virology
Research InstitutionFukuoka Woman's University

Principal Investigator

UMENE Kenichi  Fukuoka Woman's University, Faculty of human environmental science, Professor, 人間環境学部, 教授 (70127984)

Project Period (FY) 2005 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥3,400,000 (Direct Cost: ¥3,400,000)
Fiscal Year 2006: ¥1,100,000 (Direct Cost: ¥1,100,000)
Fiscal Year 2005: ¥2,300,000 (Direct Cost: ¥2,300,000)
Keywordsherpes simplex virus / HSV / herpesvirus / a sequence / genome maturation / DNA cleavage / DNA packaging / GC ratio
Research Abstract

Characteristics of herpes simplex virus type 1 (abbreviated HSV-1) are as follows:
(1) HSV-lis master herpesvirus and basic research of HSV-1 is performed at advanced level.
(2) HSV-1, which is the important human pathogene and infects 80-90% of human population, can cause severe diseases, e.g., herpes encephalitis and herpetic keratitis (the main cause of blindness).
Genome DNA maturation of HSV-1 is assumed to be done as follows:
(1) a sequence, which is the site for DNA maturation (trans-acting element), is cleaved after HSV-1 DNA replication, and virus DNA is packaged into virus particle (maturation of DNA genome).
(2) More than 10 HSV-1 genes and TAF11250 cellular gene are known to be required for DNA maturation (trans-acting elements).
<Summary of research>
The a sequence play an important role in DNA maturation of HSV-1: however, DNA sequences of the a sequence differ largely between HSV-1 isolates and it is often difficult to know effects of each element of the a sequence on the DNA m … More aturation: while these differences can be used as means for extracting essential regions of functions of the a sequence. Therefore, following experiments were performed in this study to reveal consensus sequences of the a sequence.
(1) Selection of analyzed HSV-1 strains: we have information concerning DNA polymorphisms of several hundred HSV-1 strains. Thirty HSV-1 strains were selected from these strains, considering diversity in DNA polymorphisms.
(2) Extraction of HSV-1 DNA: selected HSV-1 strains were propagated in cultured cells and HSV-1 DNA was extracted.
(3) Molecular cloning of the a sequences of HSV-1 strains: extracted HSV-1 DNA was subjected to electrophoresis after digestion with restriction endonuclease; DNA fragments containing the a sequence were recovered from the gel of electrophoresis, purified, inserted into cloning vector, and molecularly cloned.
(4) Determination of sequences of the a sequences: DNA sequences of molecularly cloned a sequences were determined.
(5) Existence of the a sequence, which have arrangements of elements and sequences differing from the a sequences reported previously, was revealed. Less

Report

(3 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • Research Products

    (12 results)

All 2007 2006 2005 Other

All Journal Article (12 results)

  • [Journal Article] Discriminant analysis of DNA polymorphisms in herpes simplex virus type 1 strains involved in primary compared to recurrent infections.2007

    • Author(s)
      Kenichi Umene, et al.
    • Journal Title

      Journal of Virological Methods 139

      Pages: 159-165

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Discriminant analysis of DNA polymorphisms in herpes simplex virus type 1 strains involved in primary compared to recurrent infections.2007

    • Author(s)
      Umene K, et al.
    • Journal Title

      Journal of Virological Methods 139

      Pages: 159-165

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] ヘルペスウイルスのゲノム進化2006

    • Author(s)
      梅根健一
    • Journal Title

      日本臨床 64

      Pages: 19-23

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary 2005 Annual Research Report
  • [Journal Article] HSVの分子疫学的解析2006

    • Author(s)
      梅根健一
    • Journal Title

      日本臨床 64

      Pages: 210-214

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary 2005 Annual Research Report
  • [Journal Article] Molecular evolution of herpesviruses.2006

    • Author(s)
      Umene K
    • Journal Title

      Nippon Rinsho 64

      Pages: 19-23

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Molecular epidemiology of HSV infection.2006

    • Author(s)
      Umene K
    • Journal Title

      Nippon Rinsho 64

      Pages: 210-214

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] ヘルペスウイルスのゲノム変化と多様性2005

    • Author(s)
      梅根健一
    • Journal Title

      比較生理生化学 22

      Pages: 27-31

    • NAID

      10025858087

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Variation and diversity of herpesvirus genome.2005

    • Author(s)
      Umene K
    • Journal Title

      Comparative physiology and biochemistry 22

      Pages: 27-31

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] ヘルペスウイルスのゲノム変化と多様性2005

    • Author(s)
      梅根健一
    • Journal Title

      比較生理生化学 22・1

      Pages: 27-31

    • NAID

      10025858087

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Recurrent herpes simplex virus infection in a patient with autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy associated with L29P and IVS9-1G>C compound heterozygous autoimmune regulator gene mutations.

    • Author(s)
      Nagafuchi S, Umene K, et al.
    • Journal Title

      Journal of Internal Medicine (In press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Recurrent herpes simplex virus infection in a patient with autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy associated with L29P and IVS9-1G>C compound heterozygous autoimmune regulator gene mutations.

    • Author(s)
      Nagafuchi S, Umene K, et al.
    • Journal Title

      Journal of Internal Medicine (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Recrrent herpes simplex virus infection in a patient with autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy associated with L29P and IVS9-1G>C compound heterozygous autoimmune regulator gene mutations.

    • Author(s)
      Nagafuchi S, Umene K, et al.
    • Journal Title

      Journal of Internal Medicine In press

    • Related Report
      2006 Annual Research Report

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Published: 2005-04-01   Modified: 2016-04-21  

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