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Identifications of diagnostic biomarkers specific binding to soluble proteins of adenocarcinoma A 549 cell lines by an autoantibodiomics

Research Project

Project/Area Number 17590501
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Laboratory medicine
Research InstitutionOsaka Medical College

Principal Investigator

NAKANISHI Toyofumi  Osaka Medical College, Faculty of Medicine, Associate Professor, 医学部, 助教授 (10247843)

Co-Investigator(Kenkyū-buntansha) SHIMIZU Akira  Osaka Medical College, Faculty of Medicine, Emeritus Professor, 医学部, 名誉教授 (00028581)
TAKEUCHI Toru  Osaka Medical College, Faculty of Medicine, Research Associate, 医学部, 助手 (10330078)
MURAO Hitoshi  Osaka Medical College, Faculty of Medicine, Research Associate, 医学部, 助手 (00278540)
GOTO Isao  Osaka Medical College, Faculty of Medicine, Assistant Professor, 医学部, 講師 (90330084)
Project Period (FY) 2005 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥3,600,000 (Direct Cost: ¥3,600,000)
Fiscal Year 2006: ¥1,000,000 (Direct Cost: ¥1,000,000)
Fiscal Year 2005: ¥2,600,000 (Direct Cost: ¥2,600,000)
KeywordsAutoantibody / Cancer / Proteomics / Adenocarcinoma / Biomarker / Diagnosis / 癌プロテオミクス / 自己抗体 / 肺アデノカルシノーマ / 肺癌バイオマーカー / 2D-PAGE / α-エノラーゼ / ペルオキシレドキシン-6
Research Abstract

At 2001, Prof. Hanash and his colleagues first reported that the autoantibodies against Annexin-I & II frequently (37-40%) were existed in plasma of lung adenocarcinoma using proteomics-based analysis. Thereafter many researchers have been identified autoantibody in cancer patients' plasma against targeted proteins derived from cancer cells using the same technique. We also applied the novel proteomics-based analysis to identify the candidate biomarkers for the diagnosis of lung adenocarcinoma. The advantages of the identification of autoantibodies against cancer/tumor related antigens were more easy and simple than the gene analytical method. This technique, so-called autoantibodiomics, was expected to apply the screening of cancer diagnostic biomarkers in plasma. In this project we identified candidate new lung cancer diagnosis markers.
[Method] We treated a cultured human lung cancer cell strain (A549) in solubilization buffer solution and soluble fractions were applied a sample solution. The soluble proteins were separated with a two-dimensional electrophoresis and then transferred on a PVDF membrane. After blocking the PVDF membrane, plasma (500 times dilution) as a primary antibody was reacted with separated proteins on membrane, detected a positive spots using ECLplus reagent Kit. On the other hand, silver-staining gel was cut-off a positive spots corresponding to the ECL positive spots and analyzed them by a time-of-flight mass spectrometer (UltraFlex) or an ion trap type mass spectrometer ( LCQDECA) and a database searched a provided result and identified target proteins.
[Results and conclusion] We found eight kinds of biomarkers, anti α-enlace, chaperonin, peroxiredoxin-6 autoantibodies, in patients' plasma of lung adenocarcinoma. We concluded that these autoantibodies were candidate biomarker to diagnose lung adenocarcinoma.

Report

(3 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • Research Products

    (7 results)

All 2006 2005 Other

All Journal Article (7 results)

  • [Journal Article] Detection of eight antibodies in cancer patients' sera against proteins derived from the adenocarcinoma A549 cell line using proteomics-based analysis.2006

    • Author(s)
      Nakanishi T, Takeuchi T, Ueda K, Murao H, Shimizu A
    • Journal Title

      J Chromatogr B Analyt Technol Biomed Life Sci 838・1

      Pages: 15-20

    • NAID

      10025784546

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Proteomic-based approach identifying autoantibody against peroxiredoxin VI as a novel serum marker in esophageal squamous cell carcinoma.2006

    • Author(s)
      Fujita Y, Nakanishi T, Hiramatsu M, Mabuchi H, Miyamoto Y, Miyamoto A, Shimizu A, Tanigawa N
    • Journal Title

      Clin. Cancer Res. 12・21

      Pages: 6415-6420

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Detection of eight antibodies in cancer patients' sera against proteins derived from the adenocarcinoma A549 cell line using proteomics-based analysis.2006

    • Author(s)
      Nakanishi T, Takeuchi T, Ueda K, Murao H, Shimizu A.
    • Journal Title

      J Chromatogr B Analyt Technol Biomed Life Sci 838(1)

      Pages: 15-20

    • NAID

      10025784546

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Proteomic-based approach identifying autoantibody against peroxiredoxin VI as a novel serum marker in esophageal squamous cell carcinoma.2006

    • Author(s)
      Fujita Y, Nakanishi T, Hiramatsu M, Mabuchi H, Miyamoto Y, Miyamoto A, Shimizu A, Tanigawa N.
    • Journal Title

      Clin.Cancer Res. 12(21)

      Pages: 6415-6420

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Proteomic-based approach identifying autoantibody against peroxiredoxin IV as a novel serum marker in esophageal squamous cell carcinoma.2006

    • Author(s)
      Fujita Y, Nakanishi T, Hiramatsu M, Mabuchi H, Miyamoto Y, Miyamoto A, Shimizu A, Tanigawa N.
    • Journal Title

      Clin.Cancer Res. 12・21

      Pages: 6415-6420

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Hb KOCHI [β141(H19)Leu→Val (g.1404 C→G);144-146(HC1-3)Lys-Tyr-His→0(g.1413 A→T)]:A NEW VARIANT WITH INCREASED OXYGEN AFFINITY.2005

    • Author(s)
      Ayako Miyazaki, Toyofumi Nakanishi, Akira Shimizu, Miki Mizobuchi, Yasuhiro Yamada, Kiyohiro Imai:
    • Journal Title

      Hemoglobin 29・1

      Pages: 1-10

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Detection and characterization of variant and modified structures of proteins in blood and tissues by mass spectrometry

    • Author(s)
      Akira Shimizu, Toyofumi Nakanishi, Ayako Miyazaki
    • Journal Title

      Mass Spectrometry Review (in press)

    • Related Report
      2005 Annual Research Report

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Published: 2005-04-01   Modified: 2016-04-21  

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